Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4877 ATGAAGGTTCAGTTGGTCTTCCTCCTCATGTATGGAATAACTTGTTTTCTGAAAGTTCTGTTATGGAATCTCCATTGGTTGAAGTACGCTATGTTTCGGTTCCAAAAGGGACTTATGCAAAACTTCAACCTGAAAGCAGGATTTTCTGATTTGCCAAACCATAATGCTATCCTCAAAACAAGTCTTCAACAGCATGCTACTCTTTCTCAAGGTGACATTTTCACCGTAAACTATGGAGAACTTGAATACAAATTAAGGGTGCTTGAGTTAAAACCTTCTTCAAGTGTATCTGTGTTAGAAACAGATATTGAAGTTGACATAGTTGATCCGATTGAATCCTCGGAACAAACTGATCAACATGTTTTGATTGAGGAGGCCAAAGATCACATTCATTGTGACAGGTGTGGTCAATCTTTCCAGCAGGCAGAATTGGAAAAGCATATGGAAGTTTTTCACGAATCACTTCAGTGCCCTTGTGGAATAGTACTTGAGAAAGAGCAAATGGTTGCAGTGATGAACACTTGTTAA 528 0.3864 MKVQLVFLLMYGITCFLKVLLWNLHWLKYAMFRFQKGLMQNFNLKAGFSDLPNHNAILKTSLQQHATLSQGDIFTVNYGELEYKLRVLELKPSSSVSVLETDIEVDIVDPIESSEQTDQHVLIEEAKDHIHCDRCGQSFQQAELEKHMEVFHESLQCPCGIVLEKEQMVAVMNTC* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4877 175 Pfam Ubiquitin fusion degradation protein UFD1 44 110 IPR004854 GO:0006511
Mal4g4877 175 PANTHER UBIQUITIN FUSION DEGRADATON PROTEIN 1 124 170 IPR004854 GO:0006511
Mal4g4877 175 PANTHER UBIQUITIN FUSION DEGRADATON PROTEIN 1 44 123 IPR004854 GO:0006511
Mal4g4877 175 PANTHER UBIQUITIN FUSION DEGRADATION UFD1 FAMILY PROTEIN 44 123 - -
Mal4g4877 175 PANTHER UBIQUITIN FUSION DEGRADATION UFD1 FAMILY PROTEIN 124 170 - -
Mal4g4877 175 Gene3D - 41 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4877 Mal-Chr4 128316612 128317461 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal4g4877 UFD1 2.4e-19 CL0402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4877 - - cam:101492821 144.05