Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4873 ATGGCGGAATCTCCTTCTTACGGATTAGCTCCTCGATTAGATATTCAGCAATTACAATTTGAAGCCCAACATCGGTGGTTGCGACCTGCAGAAATTTGTGAAATTCTTCGTAATTATCGGATGTTTCACATCACACCAGAACCTCATACAAGGCCACCGAGTGGTTCACTTTTTCTTTTTGACCGGAAGGTTCTGAGATACTTTAGAAAGGATGGGCATAATTGGAGAAAGAAAAAAGATGGGAAAACTGTGAAAGAAGCTCATGAAAAATTGAAGGTGGGGAGTGTTGATGCGTTACACTGCTACTACGCACACGGAGAAGAAAACGAAAATTTCCAAAGGCGAAGCTATTGGTTGCTTGAACAGGATACACACATAGTATTTGTCCACTACTTGGAAGTTAAGAGTAACAAGTCAAATATTGGAGGAAATGCCGATAGCAATGAGGTCATATCAGATTCTCAACAGGTCAACTCTCCGTCATCTGGCATTCCCACAACTTATAGTAGTGTGCCTTCACTAAGTACAGATTCTATGAGCCCAACTAGCAGCTATACATCTTTACGTGAAGATGCTGATTCAGGTGATCATGGACAGTCATCAGTTTCTGGAACGGATTATATCTCACCTTTTAACAGGGATAAATATAGAGGAAATGGTGCTACTTGCATTGATGGCCTGGCAGCACATGGCCAGGCATCGTGGGACACAGCTTTGCAAGGCACTGCTGAGTTGCATGCTGATCCTTCTCTTGTATCTTTTACTTCCATCCCATCTGATTCACTGTCAAACATCCTTGACCAAGAACATAACATCATGGGTGACTTTTCAATGAGCAAAAGTGGCCTCACTGTTGGAGCAGGGTGCTCTCAGCCTCTCCATTCAAATTGGCAGATTCCTTTTGAAGATAGCGCAGGACACATGCCAACCTTAACCCAATTATTGAGTATGGAATTCGGATCTGATTATGGCAGTGGTTTACTAGGGGATAAAGCTCATAATGAAAGTTCTGAAATTGATCCTGCCATGTTTAGTTTTCATGGTGAGCCAAAAGAGAAGTTTGCTCAACAAAACTATTTGGAAGAGAAGGTAGATGGACACACGCAAGATGACTTAAAGTCCAATTCCACAAATCAAGTTCCTAGTGAAGAAACTATCAACTATCCCTTATCTGTGAGGCGCACATTATTGGACAGGGACGAGAGCTTGAGGAAGGTTGATAGCTTCAATCGATGGATTACTAAAGCCCTTGGAGATGTGGATGATTTGAATATGCAGTCCTCACCTGGTATTTCATGGAGTGCAGATGATTGTGGGAATGTGATAGATGATACCTCCCTGAGCCCATCTCTATCTCAGGACCAACTGTATAGCATAAATGATTTTTCGCCTAAATGGGCTTATGCTGAGTCAGACACTGAGGTGTTGATTATTGGATCGTTTTTGAAAAGTCAACCAGATGTTACAACCTGTAACTGGTCCTGTATGTTTGGGGAAGTTGAGGTTCCTGCTGAGGTTGTAGCTAATGGAATTCTGTGTTGTCAAGCTCCTCCTCATAAGGTTGGGCGGGTCCCTTTCTATGTAACATGTTCCAATAGGTTAGCTTGCAGTGAAGTGCGTGAATTTGATTTCAGAGAGGGCTATTCTAGAAATGTAGATTATACAAATTTTTTCAACAGTTCAAATGACATGCTGCTTCATTTCCGGCTAGAGGAGTTTATTTCTTTAAAACCAGTGCACCCTTCAAATCAAACCTTTGAGGGCGATACAGAGAAAAGGAGCTTAATTTTTAAGCTTATTTCACTGAGAGAGGAAGAAGAATATTCAAGTAAGGAAGATCAGACTGTAGAGATGGATATATCACGACACAGGTTGAAGAAGCATCTGTTTCATAGGCAGGTTAAAGAGAAACTGTACTCATGGCTTCTTCACAAGGTAACTGAGAGTGGTAAAGGGCCAAATGTGTTAGATAAGGATGGGCAGGGCGTGCTACATTTAGCAGCTGTTCTTGATTATGACTGGGCAATAATCCCAATTTTAACTGCTGGAGTTAATATCAACTTCCGTGATGTGAATGGATGGACGGCCTTACATTGGGCCGCATCTTGTGGCAGAGAGAGGACAGTTGGTGTCCTTGTACACAGGGGTGCAGATTGTGGAGCATTGACGGATCCATCTTCAGAATTTCCTTCAGGTAGAACAGCTGCAGATCTTGCCTCTAGCAATGGGCACAAAGGACTCTCTGGTTTTCTAGCCGAGTCTTCATTAACCAGCCACCTTGAATCCCTCACAGTGGATGATCAACGAAAAGGTGGTCAGCAAGAAGTTTCAGGAACTAAAGCAGTGCAGACAGTTTCAGAACGAACTGCAACACCTGTGGTCTATAATGATATGCCCGATGCTCTCTGCCTTAAAGATTCTCTAACTGCTGTCCGTAATTCTACACAAGCTGCTGATCGCATACGTCAAGTGTTCAGAATGCAGTCCTTTCAGAGGAAGCAGTTAACTCAGGATGAGGATGATGAGTTTAGTTTGTTAGATCAGCGGGCTCTTTCTCTTCTAGCTTCTAAGGCGTGCAAGTCAGGACAAGGAGATGGTTTAGTCAATGCTGCTGCAACTCAAATACAGAAAAAGTTCCGTGGTTGGACAAAGAGAAAAGAGTTCTTGATCATTCGTCAAAGAATTGTTAAAATCCAGGCCCATGTAAGAGGTCACCAGGTAAGGAAGCAGTATAAGACTGTCATCTGGTCTGTGGGAATCCTGGAGAAGGTTATATTACGCTGGAGACGTAAGGGTAGTGGTCTACGTGGGTTTCGACCAGAAACCCTTAATAAAGCCCCCAGTCAACAAAATGATTCTCAGAAAGATGATGATTATGATTATTTAAAGGAAGGACGAAAACAAAAAGAGGAAAAGATCCAAAAGGCTCTTTCTAGGGTGAAGTCCATGGTTCAGTATCCGGAGGCACGGGCACAATACCGGCGCGTGCTAAATGTTGTTGAAGGCTTCCGTCAAAAGAAGGATTGTAATATGGGTTTGATGAGTTCTGAAGAGACAGTTGATGGTGTGGAGGATTTGATTGACATCGATATGCTTCTTGATGATGAAAATTTCATCCCTATAGCATTTGATTGA 3135 0.4262 MAESPSYGLAPRLDIQQLQFEAQHRWLRPAEICEILRNYRMFHITPEPHTRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDALHCYYAHGEENENFQRRSYWLLEQDTHIVFVHYLEVKSNKSNIGGNADSNEVISDSQQVNSPSSGIPTTYSSVPSLSTDSMSPTSSYTSLREDADSGDHGQSSVSGTDYISPFNRDKYRGNGATCIDGLAAHGQASWDTALQGTAELHADPSLVSFTSIPSDSLSNILDQEHNIMGDFSMSKSGLTVGAGCSQPLHSNWQIPFEDSAGHMPTLTQLLSMEFGSDYGSGLLGDKAHNESSEIDPAMFSFHGEPKEKFAQQNYLEEKVDGHTQDDLKSNSTNQVPSEETINYPLSVRRTLLDRDESLRKVDSFNRWITKALGDVDDLNMQSSPGISWSADDCGNVIDDTSLSPSLSQDQLYSINDFSPKWAYAESDTEVLIIGSFLKSQPDVTTCNWSCMFGEVEVPAEVVANGILCCQAPPHKVGRVPFYVTCSNRLACSEVREFDFREGYSRNVDYTNFFNSSNDMLLHFRLEEFISLKPVHPSNQTFEGDTEKRSLIFKLISLREEEEYSSKEDQTVEMDISRHRLKKHLFHRQVKEKLYSWLLHKVTESGKGPNVLDKDGQGVLHLAAVLDYDWAIIPILTAGVNINFRDVNGWTALHWAASCGRERTVGVLVHRGADCGALTDPSSEFPSGRTAADLASSNGHKGLSGFLAESSLTSHLESLTVDDQRKGGQQEVSGTKAVQTVSERTATPVVYNDMPDALCLKDSLTAVRNSTQAADRIRQVFRMQSFQRKQLTQDEDDEFSLLDQRALSLLASKACKSGQGDGLVNAAATQIQKKFRGWTKRKEFLIIRQRIVKIQAHVRGHQVRKQYKTVIWSVGILEKVILRWRRKGSGLRGFRPETLNKAPSQQNDSQKDDDYDYLKEGRKQKEEKIQKALSRVKSMVQYPEARAQYRRVLNVVEGFRQKKDCNMGLMSSEETVDGVEDLIDIDMLLDDENFIPIAFD* 1045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4873 1044 MobiDBLite consensus disorder prediction 364 384 - -
Mal4g4873 1044 ProSiteProfiles CG-1 DNA-binding domain profile. 15 140 IPR005559 GO:0003677
Mal4g4873 1044 Gene3D - 622 762 IPR036770 -
Mal4g4873 1044 Gene3D - 868 914 - -
Mal4g4873 1044 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 1 1 196 - -
Mal4g4873 1044 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 1 194 1044 - -
Mal4g4873 1044 Pfam IQ calmodulin-binding motif 893 912 IPR000048 GO:0005515
Mal4g4873 1044 Pfam IQ calmodulin-binding motif 870 888 IPR000048 GO:0005515
Mal4g4873 1044 Gene3D Immunoglobulins 452 548 IPR013783 -
Mal4g4873 1044 SMART iq_5 867 889 IPR000048 GO:0005515
Mal4g4873 1044 SMART iq_5 890 912 IPR000048 GO:0005515
Mal4g4873 1044 ProSiteProfiles Ankyrin repeat region circular profile. 692 718 - -
Mal4g4873 1044 ProSiteProfiles IQ motif profile. 869 897 IPR000048 GO:0005515
Mal4g4873 1044 MobiDBLite consensus disorder prediction 145 189 - -
Mal4g4873 1044 SUPERFAMILY Ankyrin repeat 642 753 IPR036770 -
Mal4g4873 1044 MobiDBLite consensus disorder prediction 145 209 - -
Mal4g4873 1044 Pfam CG-1 domain 21 133 IPR005559 GO:0003677
Mal4g4873 1044 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 1 196 - -
Mal4g4873 1044 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 194 1044 - -
Mal4g4873 1044 Pfam Ankyrin repeats (3 copies) 638 720 IPR002110 GO:0005515
Mal4g4873 1044 SMART CG_1_2 18 135 IPR005559 GO:0003677
Mal4g4873 1044 MobiDBLite consensus disorder prediction 938 958 - -
Mal4g4873 1044 Pfam IPT/TIG domain 459 533 IPR002909 -
Mal4g4873 1044 ProSiteProfiles IQ motif profile. 891 915 IPR000048 GO:0005515
Mal4g4873 1044 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 867 918 IPR027417 -
Mal4g4873 1044 SUPERFAMILY E set domains 459 544 IPR014756 -
Mal4g4873 1044 SMART ANK_2a 659 688 IPR002110 GO:0005515
Mal4g4873 1044 SMART ANK_2a 692 721 IPR002110 GO:0005515
Mal4g4873 1044 SMART ANK_2a 731 760 IPR002110 GO:0005515
Mal4g4873 1044 ProSiteProfiles Ankyrin repeat profile. 692 724 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4873 Mal-Chr4 128194997 128205917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4873 1 1007 CAMTA Transcription Factor Family AT5G64220 51.750 0.0 1024
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Mal4g4873 CG-1 4e-51 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4873 K21596 - gmx:100818124 1602.03