Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4872 ATGGATAGTCTTTGTTGCTTCAACTCTTCCAAAAAGGTTGGAGGACGTTCTACATGTGGCTCTGGAAAAGGCAAGAGCCTTCAGTGCCCTCTTAAATATGGGTTTTGCTTAGTTGAAGGGACACAAGACCACACAATGGAGGACTTCCACGTTGCGAAAATCGTCCAGTTCAACGGACGAGAGTTGGGACTTTTTGCTATATTTGATGGACACTCGGGTGACACTGTGCCTGCTTATTTACAAAAACATCTCTTTTCTAATATCTTGAAGGAAGAGGATTTCTGGACTGATACAAACAGTTCGATTATCGAAGCTTATGAAGCAACTGATCAGGCCATTCTATCCCACAGTCCTGATTTGGGGCGAGGAGGGTCGACTGCAGTGACTGCCATTCTTATAAATAATCAGAAGTTATGGATAGCAAATGTTGGAGATTCAAGGGCAGTTCTGTCGAGGAAAGGTGTCGCTATACAGATGAGTATTGATCACGAGCCCAATACTGAAAGACGTATCATCGAGAATAAAGGCGGATTTGTCTCAAACCTTCCAGGAGATGTTGCAAGAGTGAATGGACAGCTTGCAGTTGCTCGGGCATTTGGAGACAGAAACCTGAAGTCACACTTGCGATCTGATCCAGACGTAAAATCCGACGATGTCGATCAAGATACTGAGCTTATGATACTTGCTAGTGATGGTCTATGGAAGGTAATGGCAAACCAAGAGGCAGTTGATATTGCAATAAAGATAAAAGATCCACAAAAGGCGGCTAAACAACTAACTGCTGAGGCATTGAAAAGAGAGTGCAGGGATGACATTTCCTGCATTGTAGTCCGTTTCAAGTGA 843 0.4365 MDSLCCFNSSKKVGGRSTCGSGKGKSLQCPLKYGFCLVEGTQDHTMEDFHVAKIVQFNGRELGLFAIFDGHSGDTVPAYLQKHLFSNILKEEDFWTDTNSSIIEAYEATDQAILSHSPDLGRGGSTAVTAILINNQKLWIANVGDSRAVLSRKGVAIQMSIDHEPNTERRIIENKGGFVSNLPGDVARVNGQLAVARAFGDRNLKSHLRSDPDVKSDDVDQDTELMILASDGLWKVMANQEAVDIAIKIKDPQKAAKQLTAEALKRECRDDISCIVVRFK* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4872 280 SUPERFAMILY PP2C-like 27 280 IPR036457 -
Mal4g4872 280 CDD PP2Cc 44 279 IPR001932 -
Mal4g4872 280 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 1 279 - -
Mal4g4872 280 Pfam Protein phosphatase 2C 43 272 IPR001932 -
Mal4g4872 280 PANTHER PROTEIN PHOSPHATASE 2C 1 279 IPR015655 GO:0004722|GO:0006470
Mal4g4872 280 SMART PP2C_4 20 277 IPR001932 -
Mal4g4872 280 Gene3D - 17 280 IPR036457 -
Mal4g4872 280 SMART PP2C_SIG_2 43 279 IPR001932 -
Mal4g4872 280 ProSiteProfiles PPM-type phosphatase domain profile. 32 279 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4872 Mal-Chr4 128187197 128189587 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4872 1 280 PP2C-type Phosphatase Gene Family AT1G22280 66.202 8.36e-134 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4872 K17506 - jre:109003252 447.203