Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4860 ATGAAGGAGGAAGAATCAACCGTTCAGATGGAATGGTTAACTTCCATTGATTCAACAACTCTCACACACTCAGAGCTTCAAGCACTTTCTCTCTCTTCTTTCTCCGCTTTCGATCTAAAATCTACGCGCGAAATCGTCACTCCCAAAATCGATCCATCAACCTTCAACCACAGCGCTGGTTCCCACCGCACCTACTCTCGATCTCACCGTCGATGTCGTGTCGCACCACCGCTTCTTCCAACTCCCACTCTCCCCTCCGACCACCGCATCATCATCGATTACCTCAAACAGTTCATCAGAGAAGATCCCAAGTTCGACACGGTCGAGCTTCGGAATCCGTCAATTCCGGAGGTGAAGGATTTGCCATTTTCCGGAGGTGAAGTGAGGAAGAGGAAGAGAGGGAGGAAACCTAAAGTGAAGGTGAATTTGGAGGAAGAGATTGTGAACAAAAACGGTGTTGTGATTGATTTTGCTGCGTTGGAGAATGTTGAGCATCCATTTGCGGCGGAGATTGCGAGAAGAACGGAGGGGTTAGGGGGGGAAGAGGAGTTGTTAGGGTTTTTGAGTGATTTGGTTGGTCAGTGGGGAAGTAGGAGGAGGAAGAGGAGGATTGTTGATGCTGCTGATTTTGGTGATGTGTTGCCTTTGGGATGGAAGCTTCTTCTTAGTCTGAAGAGGAAAGATGGTCGTGCTTGGATTTATTGCCGCAGATATATAAGCCCCAATGGACAGCAGTTTGTGTCTTGCAAAGAAGTTTCTTCCTACTTGCAGTCTCTTTTCGGTCACTCTGATTTACAGTTACAAATCAATCATAGGAGTGAAGATATACTTCCAGAACAGAGAGTGACTACTGAAAATGGAAGTAACCCAGCTGCTGCTGCTGCTGTTGTTGCCCGCGAGGAGCAGGATCAACGACAGATTGTTGCCACTAGCTCGGATATGTCTGGTTTGCCTGTCTCTAATGAACGATTTAAAGAAATAGCCTTGTTGGAGATGGAGAACCTTGCAGATGTTCAAATACATGACCTTTTTGAATGTCACAAGTGCAGCATGAGCTTTGATGAGAAGGATGCGTACTTGCAGCACCTGTTGTCTATTCATCAGAAGACGACGAGGCGATATCGACTTGGTTCATCTGTTTCAGATGGTGTTATAATTAAAGATGGGAAGTTTGAGTGCCAGTTCTGTCATAAAGTGTTTTTGGAGAAGCGTCGATACAATAGCCATGTTGGAATTCATGTTAGGAATTATTTGAGGAGAGCTGAAGATTCGCCGGGTCAGCCTAATGTCCTGGGAGCAGAAGAGTCTCCAGTCACAGATGAGATGCCTTCAAGGGTCTCTAAGATGGATGCCCTCATCGAAATTGCTCAGAATTCTATTACAGAGGATTCTGTCATGGAACCATATTGTTCCTCTAAACTGAATACAATTCCTGTTTCAAAAATTGCGGTTGGTGACTTAGATGAAGAGATAGTCGTTGCGTCTCCAATTGGTAAACAGAAAATGGAAGAGAGCTTGACTGGTACAAATGTAGTTAGCGATCTAAATCGGCAAGGTAGTCCTTGTTTACCCATGGATGGAACAATAGAGGAAATTGACAACAATAACCGAGTTATTGATGCAAAGATGGTTAGTTTTCTAGATAACACGAGCTTGTTATCTGTAAATAAGAAAAATGTTGATGCACCTGATACTTCTAAAGGGAAAGGTGACGTGGCACTGACTGTTGAGGGGTTTGATCGTTCTGGGATTGATCTGCAAGGAGCTTCTCAAAGTCTGTTGCTTCATTCATCTGGGAATCACATGAAACCTGGATCCGAGAAGAGTGAAAATTCTGGTTGCACGAATACTAAGGGGGATCTTAAACTTAATGAAGACAGTAGTAATAAGAGTGACTTGAAAATTGGTTTAGATGGCTGCAACGATGTACCTGGTGTTTCTAATGTTCATGTGACAGTAATGCCAACTTCTAAAGAAAATGTGGTCCAATCTAGGGTTTCTAACCCCTCGGTATCCCCAGAACAATCTTTGGATTCTTTTTCTGCATTCAGCTCCGACAAGGGGTTCCAGGAATTGAGGTTAGAAGATATTGGTTCTCTTGAGTATGATTTTGCAAGTGTTCAAGGTTCTCTTGATGTGTCAACTGAATTGGCAAATGAAATAGTGGTGCAAGGGACATGTGCATCCTCAGCTCAGTCTGCATCACAAGAAGTTATGTTAAATATGGATTACAAAAATCAGCTCACAACCGTGTGTGTATGGTGTGGAATAGAGTTTAACCATGATGCTGTTAATTCTGAAATACAATCAGATTCTGTTGGATTCATGTGTCCAGTTTGCAAGGCAAAAATATCTGGTCAAATCAATGTGTTGAACTGCGGATCACCAAATGTTGGCCATCTTTAG 2406 0.4335 MKEEESTVQMEWLTSIDSTTLTHSELQALSLSSFSAFDLKSTREIVTPKIDPSTFNHSAGSHRTYSRSHRRCRVAPPLLPTPTLPSDHRIIIDYLKQFIREDPKFDTVELRNPSIPEVKDLPFSGGEVRKRKRGRKPKVKVNLEEEIVNKNGVVIDFAALENVEHPFAAEIARRTEGLGGEEELLGFLSDLVGQWGSRRRKRRIVDAADFGDVLPLGWKLLLSLKRKDGRAWIYCRRYISPNGQQFVSCKEVSSYLQSLFGHSDLQLQINHRSEDILPEQRVTTENGSNPAAAAAVVAREEQDQRQIVATSSDMSGLPVSNERFKEIALLEMENLADVQIHDLFECHKCSMSFDEKDAYLQHLLSIHQKTTRRYRLGSSVSDGVIIKDGKFECQFCHKVFLEKRRYNSHVGIHVRNYLRRAEDSPGQPNVLGAEESPVTDEMPSRVSKMDALIEIAQNSITEDSVMEPYCSSKLNTIPVSKIAVGDLDEEIVVASPIGKQKMEESLTGTNVVSDLNRQGSPCLPMDGTIEEIDNNNRVIDAKMVSFLDNTSLLSVNKKNVDAPDTSKGKGDVALTVEGFDRSGIDLQGASQSLLLHSSGNHMKPGSEKSENSGCTNTKGDLKLNEDSSNKSDLKIGLDGCNDVPGVSNVHVTVMPTSKENVVQSRVSNPSVSPEQSLDSFSAFSSDKGFQELRLEDIGSLEYDFASVQGSLDVSTELANEIVVQGTCASSAQSASQEVMLNMDYKNQLTTVCVWCGIEFNHDAVNSEIQSDSVGFMCPVCKAKISGQINVLNCGSPNVGHL* 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4860 801 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 204 276 IPR001739 GO:0003677
Mal4g4860 801 Gene3D - 194 308 - -
Mal4g4860 801 SUPERFAMILY DNA-binding domain 210 263 IPR016177 GO:0003677
Mal4g4860 801 MobiDBLite consensus disorder prediction 596 622 - -
Mal4g4860 801 Gene3D Classic Zinc Finger 323 418 - -
Mal4g4860 801 ProSitePatterns Zinc finger C2H2 type domain signature. 393 413 IPR013087 -
Mal4g4860 801 ProSitePatterns Zinc finger C2H2 type domain signature. 346 367 IPR013087 -
Mal4g4860 801 Pfam Methyl-CpG binding domain 213 258 IPR001739 GO:0003677
Mal4g4860 801 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8 5 790 IPR037472 -
Mal4g4860 801 ProSiteProfiles Zinc finger C2H2 type domain profile. 344 372 IPR013087 -
Mal4g4860 801 ProSiteProfiles Zinc finger C2H2 type domain profile. 391 418 IPR013087 -
Mal4g4860 801 MobiDBLite consensus disorder prediction 422 444 - -
Mal4g4860 801 MobiDBLite consensus disorder prediction 596 628 - -
Mal4g4860 801 SMART c2h2final6 391 413 IPR013087 -
Mal4g4860 801 SMART c2h2final6 344 367 IPR013087 -
Mal4g4860 801 PANTHER METHYL-CPG-BINDING DOMAIN PROTEIN 5 790 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4860 Mal-Chr4 128098559 128102463 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal4g4860 MBD 6.5e-05 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4860 - - gmx:100526917 902.894