Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4853 ATGGACAGTACCGGCGATGATCTAGGGTACTGGAAGAATCTAATGGCCACTTTCCTCCTTCGCCACGACGATCAACTCCGCTCCATTGCTTCTTCTCCTGATTCCAATCTTCATTTTCCACTCTACATCGACTTCGCTGAGTTGATGGATTATGATCCTCGCATTGCACGTCTCATCTTTGCCCAATCTAATACCTACCTCCAACATTTTGATGATGCTGCTCTTTGGGCTCATAGAGTCGTGTTGAGAGATATGGCTGCTGATGATAAGAACAATGTGGTTGAGAAAAAGTTCATTCACGTTCGCATTAACGTCAGTGGTTCTCCCCTTGAATGCCCTGAGACTTTTCCGACCATAGGACGTGTAAGGGTGCAGCACCGAGGGATTCTTCTCACTCTCAAAGGGATAGTAATCAGGTCAGGTGCAATTAAGATGCATGAAGGAGAGAGGAAGTACATGTGCCACAAATGCAATAGCAGCTTCACAGTTCATCCTGAGGTGGAAGCTCGAAACTCCATATCATTACCTTCATATTGTCCAATTCAGAGGTCGAAGCCCTGTGGAGGTACAAAATTCGAGTATGTAGAAAATACTATAGTGTGCCATGATTATCAGGAGATAAAAGTCCAAGAGAGTACACAGGTGCTAGGTGTTGGTGCGATCCCTCGTTCAATTCTTGTCATCTTGAAGGATGACCTTGTTGATATTGTTAAAGCTGGAGATGATGTGATTGTCACTGGTCTCTTAACAGCAAGATGGTCTCCAGAGTTGAAGGATGTGCGCTGTGACCTTGATCCGGTATTAATAGCCAACAATGTAAGGAGAATCAATGAATTGAAGTCAGAAATTGATATTTCTGATGCCATTGTTATGAAATTCAAGCACTTTTGGGGTCACTTCAAAGATGCACCTTTAAAAGGAAGGAATGCTATTCTACGAGGAATCTGCCCACAAATATTTGGTCTTTTCACAGTCAAGCTGGCGGTTGCATTAACACTAATTGGAGGTGTGCAACATGTCGATGCTTCTGGAACAAGGGTAAGGGGGGAGTCCCACTTGCTCTTGGTTGGTGATCCTGGCACTGGAAAATCTCAGTTTCTGAAATTTTCTGCAAAATTGAGCAACCGATCTGTTATTACAACTGGGTTGGGAAGCACAAGTGCAGGATTGACTGTTACTGCCGTGAAGGACGGGGGTGAGTGGATGTTGGAAGCTGGGGCCCTTGTCTTGGCAGATGGAGGATTGTGTTGTATAGATGAATTTGATAGTATGAGGGAACATGACAGAGCAACAATACATGAAGCCATGGAGCAGCAGACAATAAGTGTTGCCAAGGCTGGTCTTGTAACAACCCTCAGCACTAAAACAACAGTATTTGGCGCCACAAATCCTAAGGGACATTATGATCCAGATCAACCTCTGTCTGTCAATACAACCCTCTCTGGTCCTTTGTTAAGTAGGTTTGATATAGTTCTGGTGCTCTTGGATACAAAGAATCCTGACTGGGATGCAGTAGTTTCATCTCATATTCTTTCTGAGGCAGAACCAGATAGAACATCCAATGATGAAGATCTGGCAAATATCTGGCCCCTTTCTATACTCAAGAGGTATGTACACTATGTGAAAGAAAATTTCAGACCAGTCCTCACGAGAGAGGCCGAAACAGTTATATCCAGCTATTATCAACTTCAAAGAAAATCTGCGACTGATAATGCAGCTAGGACAACTGTCCGCATGCTTGAAAGTTTGATTCGCCTAGCTCAAGCTCATGCAAGGCTGATGTTCAGAAATGAGGTGACTCGGCTAGATGCCATCACAGCTATTTTATGTATAGAATCCTCCATGACTACCTCAGCTATTGTGGATTGCATTGGAAATGCTCTGCATTCCAACTTCACGGACAACCCTGATCAGGAATGTCCATTGGCTTTCAATGAGACTGATTATACAGGGGGATTACCACAGTTAATCCTAAGACCTTATCCATGGACAAAGAGTGCTAGCATTATATTTCTAGATGCACCAGTTGGTCCTGGATACTCATATTCTTCATCCCCTGAAAGTTTGGTTCCATCTGACTCAATGTCAGCAAGACAAACTTACAAATTCTTGAGACATTGGTTGATTGAACATCCTCAATATCTTCTAAATCGAGTCTTAATTGTCGGTGATTCATATAGCGGTATGCTTGCACCAATAATTTCGAAGCATATATTAGATGGTAATCACCAAACCTTTTTACCTTTTCTTTGTAACTTCCAAATGTGA 2268 0.429 MDSTGDDLGYWKNLMATFLLRHDDQLRSIASSPDSNLHFPLYIDFAELMDYDPRIARLIFAQSNTYLQHFDDAALWAHRVVLRDMAADDKNNVVEKKFIHVRINVSGSPLECPETFPTIGRVRVQHRGILLTLKGIVIRSGAIKMHEGERKYMCHKCNSSFTVHPEVEARNSISLPSYCPIQRSKPCGGTKFEYVENTIVCHDYQEIKVQESTQVLGVGAIPRSILVILKDDLVDIVKAGDDVIVTGLLTARWSPELKDVRCDLDPVLIANNVRRINELKSEIDISDAIVMKFKHFWGHFKDAPLKGRNAILRGICPQIFGLFTVKLAVALTLIGGVQHVDASGTRVRGESHLLLVGDPGTGKSQFLKFSAKLSNRSVITTGLGSTSAGLTVTAVKDGGEWMLEAGALVLADGGLCCIDEFDSMREHDRATIHEAMEQQTISVAKAGLVTTLSTKTTVFGATNPKGHYDPDQPLSVNTTLSGPLLSRFDIVLVLLDTKNPDWDAVVSSHILSEAEPDRTSNDEDLANIWPLSILKRYVHYVKENFRPVLTREAETVISSYYQLQRKSATDNAARTTVRMLESLIRLAQAHARLMFRNEVTRLDAITAILCIESSMTTSAIVDCIGNALHSNFTDNPDQECPLAFNETDYTGGLPQLILRPYPWTKSASIIFLDAPVGPGYSYSSSPESLVPSDSMSARQTYKFLRHWLIEHPQYLLNRVLIVGDSYSGMLAPIISKHILDGNHQTFLPFLCNFQM* 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4853 755 PRINTS Mini-chromosome maintenance (MCM) protein family signature 406 420 IPR001208 GO:0003677|GO:0005524|GO:0032508
Mal4g4853 755 PRINTS Mini-chromosome maintenance (MCM) protein family signature 348 363 IPR001208 GO:0003677|GO:0005524|GO:0032508
Mal4g4853 755 PRINTS Mini-chromosome maintenance (MCM) protein family signature 434 447 IPR001208 GO:0003677|GO:0005524|GO:0032508
Mal4g4853 755 PRINTS Mini-chromosome maintenance (MCM) protein family signature 484 492 IPR001208 GO:0003677|GO:0005524|GO:0032508
Mal4g4853 755 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 317 624 IPR027417 -
Mal4g4853 755 SMART AAA_5 349 498 IPR003593 -
Mal4g4853 755 Pfam Serine carboxypeptidase 652 745 IPR001563 GO:0004185|GO:0006508
Mal4g4853 755 Gene3D - 146 202 - -
Mal4g4853 755 SMART mcm 115 616 IPR031327 GO:0003677|GO:0005524|GO:0032508
Mal4g4853 755 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 32 640 IPR031327 GO:0003677|GO:0005524|GO:0032508
Mal4g4853 755 Gene3D - 122 250 IPR012340 -
Mal4g4853 755 PANTHER DNA HELICASE MCM9 32 640 - -
Mal4g4853 755 Pfam MCM P-loop domain 309 512 IPR001208 GO:0003677|GO:0005524|GO:0032508
Mal4g4853 755 ProSiteProfiles MCM family domain profile. 307 510 IPR001208 GO:0003677|GO:0005524|GO:0032508
Mal4g4853 755 CDD MCM9 310 614 - -
Mal4g4853 755 SUPERFAMILY Nucleic acid-binding proteins 38 258 IPR012340 -
Mal4g4853 755 Pfam MCM OB domain 122 250 IPR033762 -
Mal4g4853 755 Gene3D alpha/beta hydrolase 627 752 IPR029058 -
Mal4g4853 755 SUPERFAMILY alpha/beta-Hydrolases 651 743 IPR029058 -
Mal4g4853 755 Pfam MCM AAA-lid domain 533 614 IPR041562 -
Mal4g4853 755 Gene3D - 287 620 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4853 Mal-Chr4 128019912 128033760 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4853 15 642 Core DNA Replication Machinery Family AT2G14050 75.238 0.0 994
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4853 K10738 - gmx:100776255 1118.22