Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4815 ATGGCTGTGGCCTCAAATCAGTTGCTGCTGGCGGTGGTTGTTGCGGTCTTTTTTGTAAAAGCAGCAACTCAGCTACTATCTCTGCCAAACTGCCCAACAAGGTGTGGCTCTGTCACAATTCCCTTCCCATTTGGAACCACCAAGGATTGTTCCTTGGACAATACTTTTCTCATCAATTGCACCAAAACATCTTCAACCTCAACACATGTACCTTTCTTGCCACATACTAATCAAACTGTCCTAAACATCTCACTCGATGGTGAACTGCGCGTTGCATGGCCAGTAGCCAGCGATTGCTATGCTGAAAAGAGCATACAGGTGAACCAATCATTTTGGGGTATCAGAATGACACATTTTCCCGTCTCGTCTACTCGAAACAAGTTTGTCGCCGTTGGCTGTGACACGATCGCAATACTCGCAGCATTTGATTTTGCGGGAAACAACTACACCACCGGATGTTTGGCTTTGTGCAACAGGCTTATTGATATTGTGGCCAATGAATCTTGCTCCGGCACTGGTTGTTGCCAGATTGCAATACCTCAAGGTCATTTGTTCGAGAAAGTATCCTTTGTTACTGTAGGTGCATTCAACAATCACTCAGCAGTACATGACTTCAATCCTTGTGGTTATGCTTTTTTTGTTGAAAATGGAGCCTACACCTTCGAATCCACAGACCTCCTCAAGTTGGAGAAGAAGGAGTTTCCTGTGTTGTTGGACTGGGCAGTAGGGAACCAAACGTGCGAGCAAGCTCAGAAGGATCTTTCAAATTATGCCTGTAAGGACAACAAAAGTACATGTTACAATGCACCCGAGAGATCTGGTTACCATTGCAGATGTCTTCATGGATATAGGGGAAATCCTTACCTCATTCATGGTTGCCAAGATATTAATGAGTGCATGGAGTCCAATGACTGTGTTGAGGAAGCAACATGCACTAATCTTCCCGGAAGCTACCAGTGTTTATGTCCGGCAGAATATGAGGGAGATGGGAAAATGAATGGAACAAAATGCAGTCCAAAATCCAATACCAAATCAAGGAAAGAGATCATATTGATCATTGCAATGAGTGTCAGCATGAGCCTTGTAGCACTACTGGTTGGGAGCTTTTATGCGTATTTGGCATTAAAGAAAAGAAAGCTCATTAAACTGAAAGAACAATTTTTTCAACAAAATGGTGGCTTACTACTGCAACAACAACTGGTGAGGCATAGAGGGTCAACTGAAATAACAAAAGTCTTCACCGTTGAGGAGCTAAATGAGGCAACCAACAACTTCGACGAAGGCAAGATTCTAGGCCAAGGTGGTCAGGGAACAGTTTACAAAGGTGTCTTACAAGATAAAAGAATTGTAGCGATAAAGAAGTCCAAAATCAGTGACCCAAAACAGATTGAGCCGTTCATTAATGAAGTGATCGTGCTTTCCCAAATCAACCATAGAAATGTGGTAAAGCTCTTGGGTTGTTGTTTAGAGACAGAAGTTCCCTTACTTGTTTATGAATTCATTCCCAATGGTACTGTTTATGAGCACCTTCATGATCAAAACCAAACTTTAAAGCTTACATGGAAAACAAGATTGAGAATAGCAAAAGAAACTGCTGGAGTCCTAGCGTACTTGCATTCTGCTGCATCTACACCAATCATACATAGAGATGTGAAATCCACAAATATACTCCTAGATCGCAATCTCACTGCAAAGGTCTCTGACTTTGGAGCTTCTAGGATTATTCCTCTTGATCATAGTCAGATAAAAACCCTAGTGCAGGGGACATGGGGGTACCTTGATCCAGAATATTTCCACACAAGCCAATTAACAGAGAAGAGTGACGTCTATAGCTTTGGAGTTGTACTAGCAGAGCTACTGACAGGAAAGAAAGCACTGTCTTTTAGCAGGCCAGAGTTAGATAGAAACCTTGCATTGTACTTTGTTTCTTCAATGAAAGAGGGTCAGTTACTTCATATTTTGGACAAAAATATTGATGAGGCGAATATTGAGCAACTAAAGGAAGTTGCCCATATTGCAGAAAGGTGTTTAAAGGTGAAGGGTGAGGAAAGACCCACCATGAAAGAAGTCGCAACAGAACTGGAGGGAATAGTAGTTATTGAAGAGCACCGTTGGGGAAGTGGAAATCAGTCTTCAGAAGAGACTGAGAATTTGCTCAGAGCAGCATCACCAGTTATCAATGTTAAAGATGGTGGCAATAATTCTTCTGACTCATATAGCATAAACCAGATTACAACGTCATTGGTTGGTGGAAGATGA 2259 0.421 MAVASNQLLLAVVVAVFFVKAATQLLSLPNCPTRCGSVTIPFPFGTTKDCSLDNTFLINCTKTSSTSTHVPFLPHTNQTVLNISLDGELRVAWPVASDCYAEKSIQVNQSFWGIRMTHFPVSSTRNKFVAVGCDTIAILAAFDFAGNNYTTGCLALCNRLIDIVANESCSGTGCCQIAIPQGHLFEKVSFVTVGAFNNHSAVHDFNPCGYAFFVENGAYTFESTDLLKLEKKEFPVLLDWAVGNQTCEQAQKDLSNYACKDNKSTCYNAPERSGYHCRCLHGYRGNPYLIHGCQDINECMESNDCVEEATCTNLPGSYQCLCPAEYEGDGKMNGTKCSPKSNTKSRKEIILIIAMSVSMSLVALLVGSFYAYLALKKRKLIKLKEQFFQQNGGLLLQQQLVRHRGSTEITKVFTVEELNEATNNFDEGKILGQGGQGTVYKGVLQDKRIVAIKKSKISDPKQIEPFINEVIVLSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTVYEHLHDQNQTLKLTWKTRLRIAKETAGVLAYLHSAASTPIIHRDVKSTNILLDRNLTAKVSDFGASRIIPLDHSQIKTLVQGTWGYLDPEYFHTSQLTEKSDVYSFGVVLAELLTGKKALSFSRPELDRNLALYFVSSMKEGQLLHILDKNIDEANIEQLKEVAHIAERCLKVKGEERPTMKEVATELEGIVVIEEHRWGSGNQSSEETENLLRAASPVINVKDGGNNSSDSYSINQITTSLVGGR* 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4815 752 Pfam Wall-associated kinase 166 279 IPR013695 GO:0004674|GO:0016021
Mal4g4815 752 CDD EGF_CA 295 329 - -
Mal4g4815 752 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 12 729 IPR045274 GO:0007166
Mal4g4815 752 SUPERFAMILY Protein kinase-like (PK-like) 408 694 IPR011009 -
Mal4g4815 752 SMART serkin_6 425 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g4815 752 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 311 322 IPR000152 -
Mal4g4815 752 Gene3D Phosphorylase Kinase; domain 1 393 500 - -
Mal4g4815 752 Pfam EGF domain 301 331 IPR024731 -
Mal4g4815 752 Gene3D Laminin 244 297 - -
Mal4g4815 752 ProSitePatterns Serine/Threonine protein kinases active-site signature. 546 558 IPR008271 GO:0004672|GO:0006468
Mal4g4815 752 Gene3D Transferase(Phosphotransferase) domain 1 501 716 - -
Mal4g4815 752 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 16-RELATED 12 729 - -
Mal4g4815 752 SMART egf_5 246 294 IPR000742 -
Mal4g4815 752 SMART egf_5 298 338 IPR000742 -
Mal4g4815 752 Pfam Wall-associated receptor kinase galacturonan-binding 31 91 IPR025287 GO:0030247
Mal4g4815 752 SMART egfca_6 295 338 IPR001881 GO:0005509
Mal4g4815 752 SMART egfca_6 251 294 IPR001881 GO:0005509
Mal4g4815 752 Pfam Protein tyrosine and serine/threonine kinase 428 694 IPR001245 GO:0004672|GO:0006468
Mal4g4815 752 ProSiteProfiles Protein kinase domain profile. 425 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g4815 752 SUPERFAMILY EGF/Laminin 294 330 - -
Mal4g4815 752 ProSiteProfiles EGF-like domain profile. 295 338 IPR000742 -
Mal4g4815 752 Gene3D Laminin 298 339 - -
Mal4g4815 752 ProSitePatterns Calcium-binding EGF-like domain signature. 295 320 IPR018097 GO:0005509
Mal4g4815 752 CDD STKc_IRAK 431 697 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4815 Mal-Chr4 127557909 127561603 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4815 13 719 Receptor kinase-like Gene Family AT1G21230 47.500 0.0 632
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Mal4g4815 PK_Tyr_Ser-Thr 1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4815 - - mtr:MTR_3g088780 1017.3