Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4804 ATGGAAGCTCTAAAAGGTAATGGAGATCAAATTGTTGATGGGAATGCAGAGCAAGTTGTTAACAGGACTACCAATGATGATCCATGTGTTGGTAATTCTAATTCGGAAGCTAATGATATCCAAGAACCTTACATCGGAATGGAATTTGAGTCACAGGAAAATGCATATTCATTCTACACCCATTATGCTAAATCTATTGGGTTTGGAGTTTCTATTAAAAGTAGTCGTCGTTCAAAGGTTTCTACACAAATTATTGATGTTACTTATGCTTGCACAAGATATGAAAAAAAGAGAGCATCCACCGCGCTTAACCCACGTCCTTGTTTGAAGGTGGAGTGTGAAGCTAGCTTCCGTGTCAAAATAAATTGTGCTGGAAAATGGATTGTGCACAGCTTCACTAAAGATCACAATCATGAGCTTTTTCCAGCATATGCACATTATTTTCCTTGCCATAGAAGAATCAATAAAGCTCAACAAAATTGTATTGAAACTTTGCAACATGTTGGAGTGAGAACAACCAAAATTTACGCCTCAATGGCCAAACAACATGGAGGATGTGAAAATATTGGTTGCTTGGAGAAAGACATCAGAAACCATTTAGACAAAAGTCGTCGTTTGGCTTTAGAATCAGGTGACGCAACTGCAATGTTGGCGTGTTTTATGCTTATGCAAGAAGAAAATCCAAGATTCTTTTATGCAATTGATTTGGATGATGAAGATCGTGTGAGAAATGTATTTTGGGTAGATGCAAAAGGTAGAGATGATTATCAAGAGTTTGGAGATGTGATTTCTTTTGATACAACATATATTACAAATAAGTACAAAATGCCATTTGCTCCTTTTATTGGTGTGAATAATCACTTTCAGTCAAGGTTACTTGGTTGCGCATTACTAGTAGATGAGACCTCAAATACTTTCACATGGTTAATGAAAACATGGCTCAGAGCAATGGGTGGAAAACATCCAAATGCAATAATAACCGATCAAGATAGAGCAATGAAAGTGGCTATAAAAGAGGTATTTCCAAATACTCGACATCGATTTTGTCTTTGGCATATACTTAGAAAGGTTCCTGAGAAGCTTAGTGAAGTATTTAAAAAAAATGATGACTTCATGAAATATCTCAACTCTTGCATTTACAAGTCTTGGTCAAAGCAACAATTTTTAGATAAATGTGGATTGAGTGAAGAACGTGAACATTGGGTTCCGGTTTACATGAAGGATACATTTTTTGGTGGTATGTCAACAACTCAGAGATCAGAAAGCATTAATTCTTTTTTTTACAAATATGTGTGTAAGAAAACTACATTGAAGGAATTTGTTGAAAAATACAAAGTTGCTTTGCAGGATAGAGAAGAGGCAGAAAAACAAGCTGATTTTAATACATGGCATAAGCAACCCGTCCTTAAAACTCCTTCACCATTTGAAAAGCAAATGTCAATGATTTATACACATGAAGTCTTCAAGAAATTTCAAGTTGAAGTTTTGGGATCATCTGGAACTCATATTTTGAAAGAGAATAAAGACGGTGAAATTACCACTTTTGAAATCTTAGACTTTCAGAAAAATGAAGAGTTTGTGGTAGAGTGGGATGCTTCTAAAGAGGAGATTTCTTGCTTATGTCGCTCATTTGAGTTTAATGGATATCTTTGTAGACATTCATTGGCAGCACTTCTCTCTGTTGGTGTCTTCGCTGTTCCACCACACTATATATTGAGAAGATGGACTAAGGAGGTTAGAAGCAACCATCTTAAAAGAAAGATGAATGAGGATGTCGGTTCCAATAAAGAGAGATTTGATCATTTATATGAAAAGGCTATTGAGGTTCTTCAGGAAGGATCATTAAGTTATGATAGTTACAATTTTGCATGTCATGCACTTGATGAGGCCTTAACACAATGTAAAACTATTAATAAGTCTTTGAAAGTTGACACAAACAATGCTGGAAAAAATATTTTACATGTGAAGCCACTACTTAATCCTCGAGATGCAAAAACAAAAGGGGCTCCAAAAAGAATTAAGAGTGGGATCGAGAAAGGTCGTAGGAGAACATCTAGTAGTAGAGTGAAAAAGTCTGATATCGTTCAAAGAGAAAAAGTAAATTCCTCCAATGTTTCCAATGATGAAGTGGTGACTGTGTCAACAAGATTGGAATGTTGA 2160 0.356 MEALKGNGDQIVDGNAEQVVNRTTNDDPCVGNSNSEANDIQEPYIGMEFESQENAYSFYTHYAKSIGFGVSIKSSRRSKVSTQIIDVTYACTRYEKKRASTALNPRPCLKVECEASFRVKINCAGKWIVHSFTKDHNHELFPAYAHYFPCHRRINKAQQNCIETLQHVGVRTTKIYASMAKQHGGCENIGCLEKDIRNHLDKSRRLALESGDATAMLACFMLMQEENPRFFYAIDLDDEDRVRNVFWVDAKGRDDYQEFGDVISFDTTYITNKYKMPFAPFIGVNNHFQSRLLGCALLVDETSNTFTWLMKTWLRAMGGKHPNAIITDQDRAMKVAIKEVFPNTRHRFCLWHILRKVPEKLSEVFKKNDDFMKYLNSCIYKSWSKQQFLDKCGLSEEREHWVPVYMKDTFFGGMSTTQRSESINSFFYKYVCKKTTLKEFVEKYKVALQDREEAEKQADFNTWHKQPVLKTPSPFEKQMSMIYTHEVFKKFQVEVLGSSGTHILKENKDGEITTFEILDFQKNEEFVVEWDASKEEISCLCRSFEFNGYLCRHSLAALLSVGVFAVPPHYILRRWTKEVRSNHLKRKMNEDVGSNKERFDHLYEKAIEVLQEGSLSYDSYNFACHALDEALTQCKTINKSLKVDTNNAGKNILHVKPLLNPRDAKTKGAPKRIKSGIEKGRRRTSSSRVKKSDIVQREKVNSSNVSNDEVVTVSTRLEC* 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4804 719 Coils Coil 437 457 - -
Mal4g4804 719 ProSiteProfiles Zinc finger SWIM-type profile. 526 562 IPR007527 GO:0008270
Mal4g4804 719 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 32 650 - -
Mal4g4804 719 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 32 650 IPR031052 GO:0006355
Mal4g4804 719 Pfam SWIM zinc finger 530 561 IPR007527 GO:0008270
Mal4g4804 719 MobiDBLite consensus disorder prediction 677 697 - -
Mal4g4804 719 Pfam FAR1 DNA-binding domain 57 142 IPR004330 -
Mal4g4804 719 MobiDBLite consensus disorder prediction 677 701 - -
Mal4g4804 719 Pfam MULE transposase domain 262 355 IPR018289 -
Mal4g4804 719 SMART 26again6 537 564 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4804 Mal-Chr4 127368499 127370917 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal4g4804 MULE 4.5e-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4804 - - dzi:111309578 844.343