Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4776 ATGAGTTCTCATATGGAGATTTCATCAATAGGGTTACCTGAATTGGGGATAATAGAGGATCCTAACTTTCTCCATCACTTTAATAATCACCTAAGTTCTATTGATACCAATAACTTAACTGCTTCTGCTTTTGGAGATGCTTTGCAAAGACATATTTTGTCTAATAATCCAAACTTCAACAGCAAAACATGCATGGAGACTTCGCCTACCGGAAATGAAAGACCGGCGAAACAGTTAAGAAATAACAGCTGGAGTTACAACAATAGTCCTACAACATCAGATACACAATATGCTAATTGTTGCTCTAATAATCTTCTTTCATTTGCTGATTTGAATTACACAAATCAATTGGGACTGTTAAAGCCTAAGTCTGAAATGGTGTGTCCGAAAATCGATAACACTAGTACACTTGCAAATATGTTGATCACTCAAGGTAACTTTTTGGGGAATCAAAATCATGTCTTTAAAGCTGTTCAAGATAATGAGAATCGTCCGAATAAACACTCTCAAGCTCATGATCATATAGTAGCAGAAAGGAAGCGCCGCGAGAAGCTTAGCCAACGATTCATCGCTCTATCTGCTCTTGTTCCAAACCTAAAGAAGATGGACAAAGCTTCTGTTCTTGGAGAAGCTATAAGGTACTTGAAGCAAATGGAAGAGAAAGTGAATGTTCTTGAGGAGGAACAGAAAAGGAAGAAAACTGTGGAATCAGTAGTAATTGTGAAGAAAACTCAACTTTCTATTAATGATGCTGAAAACTCTTGCTCAGAAACTGATAATGGTACATTTGATGAGTCATTACCTGAAATTGAAGCAAGATTTTGTGAAAGATGTGTCCTCATAAGACTACATTGTTTGAAGAGTCAAGGAGTTATAGAGAAAATTATGAGTGAAATTGAGAAACTTCATCTAAAAGTCATCAATAGCAGTTCCTTGACTTTTGGGAATTTCACCCTTGATATAACCATCATTGCTCAGATGGATGTGGGATTTTGCATGACAGTGAAGGATCTTGTGAGGAAGCTACGTTCAACATATTCATCTTTCATGTGA 1053 0.3656 MSSHMEISSIGLPELGIIEDPNFLHHFNNHLSSIDTNNLTASAFGDALQRHILSNNPNFNSKTCMETSPTGNERPAKQLRNNSWSYNNSPTTSDTQYANCCSNNLLSFADLNYTNQLGLLKPKSEMVCPKIDNTSTLANMLITQGNFLGNQNHVFKAVQDNENRPNKHSQAHDHIVAERKRREKLSQRFIALSALVPNLKKMDKASVLGEAIRYLKQMEEKVNVLEEEQKRKKTVESVVIVKKTQLSINDAENSCSETDNGTFDESLPEIEARFCERCVLIRLHCLKSQGVIEKIMSEIEKLHLKVINSSSLTFGNFTLDITIIAQMDVGFCMTVKDLVRKLRSTYSSFM* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4776 350 Gene3D - 165 242 IPR036638 GO:0046983
Mal4g4776 350 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 173 232 IPR036638 GO:0046983
Mal4g4776 350 MobiDBLite consensus disorder prediction 59 90 - -
Mal4g4776 350 CDD bHLH_AtNAI1_like 169 243 - -
Mal4g4776 350 SMART finulus 175 224 IPR011598 GO:0046983
Mal4g4776 350 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 169 218 IPR011598 GO:0046983
Mal4g4776 350 Pfam Helix-loop-helix DNA-binding domain 174 219 IPR011598 GO:0046983
Mal4g4776 350 PANTHER BHLH TRANSCRIPTION FACTOR 7 349 - -
Mal4g4776 350 Coils Coil 208 235 - -
Mal4g4776 350 PANTHER SYMBIOTIC AMMONIUM TRANSPORTER 7 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4776 Mal-Chr4 127042385 127044152 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4776 169 350 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 55.738 8.79e-60 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal4g4776 HLH 9.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4776 - - gmx:100798018 464.151