Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4720 ATGATGCTCACAACATGCAAACACATAGTTTCTTTGTCGTTGTTGTTCCATTTCCTCTGTTTCTGTTTAGAGTTCTCACAAAGTGATTCTATCAAACAAGGTGATTTTATCAGAGATGAAGAAGGTGAAATTTTATTCTCAGATGGCTTCAACTTCGTAATGGGTTTCTTCGGTTTTCAAAACTCTTCTTTACGTTACGTTGGTATTTGGTATTACAACTTGCCTGAACCTCAAGTTATTTGGGTTGCAAATAGAAACACACCCATCAATGGCACTGGTGGTTCTTTCACTATAACAGAAAACGGTGATTTAGTTATCCTTGATGAAAACAAAAACCAACTATGGTCTACCAATGTTTCTATCATTCACAACAACAACGAAAATAACTCCGAAGCTGTTCTTAGAGATGATGGTAATCTTGTTCTTTCTAATGGGAATGTTGTGTTATGGCAAAGCTTTGAGAATCCAAGTGATACTTATGTACCTGGAATGAAAGTTCCTGTGAATGGGAAGAGTTTTTTCTTCACTTCATGGAAATCAAGTGAAGATCCTTCATTAGGAAATCATACTATGGGAGTTGATCCTGCAGGGTTACCAGCACAGGTAGTAGTTTGGGAAGGAAAGAAAAAGAAATGGAGAAGTGGTTATTGGGATGGTAGAATTTTTACTGGTGTTGATATGACAGGTAGTTTTCTTCATGGTTTCATACTTAATTATGATAGTAATGGAGATAGGTATTTTGTTTATGATAATAAAAATGAAATGAAGTTGAATGGTACTAGGTTAGTGAGGTTTCAGATTGGTTGGGATGGTATTGAAAGAGAGAATATATGGGATGAAGATGAGAAACGTTGGATTGAGATACAAAAAGGGCCTCATAATCAGTGTGAGTTTTATAATTATTGTGGTGGTTTTGCAGTTTGTGATTTGTCGGATTCTGGTTCGGCTATTTGTAGTTGCTTACAAGGATTTGAACTAAATGATAAGGGGAATTTGTCAAGTGGATGTAGGAGGATGACAGCATTGAAGGGTGATCAGAGCAATGGTAGTTTAGGTGAGGATGGTTTCTTGGAGCGTAGGTCTATGAAGTTGCCTGATTTTGCACATGTGGTAGAAACTAAGGATTGTGAAGGTAGTTGTTTGGAGAATGCTTCTTGTACTGCTTATGCAGAAGTAATTGGAATTGGTTGTATGGTTTGGTATGGGGATTTGGTTGATGTTCAACACTTTGAACGTGGTGGAAATATATTGTATATTCGTCTTGCTCATTCTGATTTAGGCCATGGAGGGATAAACAAGAAGATTGTGATTGTGATATCAACTGTTCTAGCAGGGTTAATCTGCCTAGGAATCATTGTATTGTTGGTATGGAGGTACAAGAGGAAACTCAAAGCTGCATGTTGCAAAAATAGTGAAATACTACCTGTCGTTGATGCACACGAGAGCAGAGAGAAGTCAGCAGAAATTCCAGGATCAGTTGAACTTAGTTTGAAAAGTAATCAACTAAGCAGAGAGCTTCCATTTTTCAATTTTAATTGCATGTCAGCAGCTACCAACAATTTTTCTGAAGAAAATAAGCTTGGACAAGGCGGATTCGGTCCTGTGTACAAGGGAAAGCTTCCGTCCGGAGAAGAAATAGCGGTCAAGAGACTTTCAAGACGGTCCAGCCAAGGTTTAGATGAGTTCAAGAATGAAATGAGGTTGTTTGCAAAACTGCAACATAGAAATCTGGTTAGACTAATGGGATGTTCTATTGAAGGAGATGAAAAGTTGCTTGTATACGAATTCATGCCGAACAAAAGCTTGGATTGCTTTTTATTTGATCCTATTAAGCAAACACAATTAGACTGGGCAAGACGTTATGAAATCATTGAAGGCATTGCAAGAGGACTACTTTATCTGCATCGCGATTCAAGACTCAGAATAATTCATCGAGATCTAAAACCAAGTAACATTTTGTTAGATGAAAACATGAATCCAAAACTATCTGACTTTGGCTTGGCCCGGATATTTGGTGGAAACCAGAATGAAGCCAATACAAACAGAGCCGTTGGTACATATGGTTATATGTCTCCTGAATATGCAATGCAGGGCTTATTTTCAGTCAAGTCAGATGTATATAGTTTTGGCGTATTGCTACTAGAGATTGTGAGTGGCCGCAGAAACACTAGCTTTCGTCATTCAGATTATTCAAGTCTCATAGGATATGCATGGCATCTATGGAATGAAGAGAGAGTGATGGAACTTGTCGATGCTTGCATTGGTGATTTGAGTCCCAACACTGAGGCTTTGAGATGCATACAAATAGGGATGTTATGTGTGCAAGATTCAGCATCTCATAGACCAAACATGTCTGATATTGTGTTGATGCTTGAGAGTGAAGCAACAACTCTTCCATTACCTACGCAGCCTTTGATTACTTCCATCAAAAGATCTGTGGACAGAGAGTGTTACAAGGATGGTCTTGATGTTTCAAATGATCTCACAATCTCAACGGTAGAAGGGAGATAG 2511 0.3831 MMLTTCKHIVSLSLLFHFLCFCLEFSQSDSIKQGDFIRDEEGEILFSDGFNFVMGFFGFQNSSLRYVGIWYYNLPEPQVIWVANRNTPINGTGGSFTITENGDLVILDENKNQLWSTNVSIIHNNNENNSEAVLRDDGNLVLSNGNVVLWQSFENPSDTYVPGMKVPVNGKSFFFTSWKSSEDPSLGNHTMGVDPAGLPAQVVVWEGKKKKWRSGYWDGRIFTGVDMTGSFLHGFILNYDSNGDRYFVYDNKNEMKLNGTRLVRFQIGWDGIERENIWDEDEKRWIEIQKGPHNQCEFYNYCGGFAVCDLSDSGSAICSCLQGFELNDKGNLSSGCRRMTALKGDQSNGSLGEDGFLERRSMKLPDFAHVVETKDCEGSCLENASCTAYAEVIGIGCMVWYGDLVDVQHFERGGNILYIRLAHSDLGHGGINKKIVIVISTVLAGLICLGIIVLLVWRYKRKLKAACCKNSEILPVVDAHESREKSAEIPGSVELSLKSNQLSRELPFFNFNCMSAATNNFSEENKLGQGGFGPVYKGKLPSGEEIAVKRLSRRSSQGLDEFKNEMRLFAKLQHRNLVRLMGCSIEGDEKLLVYEFMPNKSLDCFLFDPIKQTQLDWARRYEIIEGIARGLLYLHRDSRLRIIHRDLKPSNILLDENMNPKLSDFGLARIFGGNQNEANTNRAVGTYGYMSPEYAMQGLFSVKSDVYSFGVLLLEIVSGRRNTSFRHSDYSSLIGYAWHLWNEERVMELVDACIGDLSPNTEALRCIQIGMLCVQDSASHRPNMSDIVLMLESEATTLPLPTQPLITSIKRSVDRECYKDGLDVSNDLTISTVEGR* 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4720 836 Pfam S-locus glycoprotein domain 212 326 IPR000858 GO:0048544
Mal4g4720 836 Gene3D Transferase(Phosphotransferase) domain 1 597 799 - -
Mal4g4720 836 Gene3D - 24 153 IPR036426 -
Mal4g4720 836 ProSiteProfiles PAN/Apple domain profile. 336 422 IPR003609 -
Mal4g4720 836 CDD STKc_IRAK 527 792 - -
Mal4g4720 836 Pfam PAN-like domain 352 407 IPR003609 -
Mal4g4720 836 ProSiteProfiles Protein kinase domain profile. 521 806 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g4720 836 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 219 IPR036426 -
Mal4g4720 836 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 1 836 - -
Mal4g4720 836 ProSitePatterns Serine/Threonine protein kinases active-site signature. 642 654 IPR008271 GO:0004672|GO:0006468
Mal4g4720 836 Gene3D Phosphorylase Kinase; domain 1 484 596 - -
Mal4g4720 836 Pfam D-mannose binding lectin 79 179 IPR001480 -
Mal4g4720 836 ProSiteProfiles Bulb-type lectin domain profile. 28 155 IPR001480 -
Mal4g4720 836 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 1 836 - -
Mal4g4720 836 SMART blect_4 36 156 IPR001480 -
Mal4g4720 836 CDD B_lectin 42 156 IPR001480 -
Mal4g4720 836 Pfam Protein tyrosine and serine/threonine kinase 524 790 IPR001245 GO:0004672|GO:0006468
Mal4g4720 836 SUPERFAMILY Protein kinase-like (PK-like) 504 817 IPR011009 -
Mal4g4720 836 SMART serkin_6 521 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g4720 836 SMART ntp_6 351 421 IPR003609 -
Mal4g4720 836 PIRSF SRK 1 836 IPR024171 GO:0004674
Mal4g4720 836 CDD PAN_AP_plant 353 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4720 Mal-Chr4 126359875 126363253 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4720 509 804 Receptor kinase-like Gene Family AT4G23230 62.626 3.36e-126 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mal4g4720 PK_Tyr_Ser-Thr 2.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4720 - - aprc:113869342 1187.17