Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4717 ATGATGCTCACAACATACCAACGTTTAACGTTGTTGTTCTGTTTCCTCTGTTTCTGTTCTGAATTCTCATGTGCTGCTTCACCTTCCAGAGTCAGTATCAAACATGGTGAATCCATCAGAGACAAAGAAGGTGAAGTTTTGGTTTCGAATGGCTTCAACTTCGTAATGGGTTTCTTCGGTTTTCAAAACTCTTCTTCACGTTACGTTGGAATTTGGTACTACAATATTCCTGGACCAGAAGTTATTTGGGTTGCAAACAGAAACGAACCCATCAATGGAAACGGTGGTTCTTTCACTCTATCAACAAACGGAAACTTAGTTATCCATGATGGAAACAAAAACCAAATTTGGTCAACCAATGTTTCCATCATTCACAACAACAAAAGTAATTCTGAAGTTGTTCTTCACGATGATGGTAATCTTGTTCTTTCATATGAGAAAGATAATTTATGGGAAAGTTTTGAAAATCCAAGTGATACTTATGTACCTGGTATGAAAGTTCCTGTGAATAGGAAGGGGAAGAGCTCTTTCTTTACTTCATGGAAATCAAGTACAGATCCTTCATTAGGGAACTATACTATGGGAGTTGATCCTGCAGGGTTGCCACCACAGATAGTAGTTTGGGAGGGAGAGAGAAGAACATGGAGAAGTGGTTATTGGGATGGTAGAATTTTCACTGGTGTTGATATGACAGGTAGTTTTCTTCATGGTTTTATACTTAATGGGGATAGTAATGGAGAAAGGTATTTTGTTTATGATAATAATAATGAAATGTTGTTGAATGGTACTAGGTCAGTGAGGTTTCAGATTGGTTGGGATGGTATTGAAAGAGAGTTTATATGGGATGAAGATGAGAAACGTTGGATTGAGATACAAAAAGGGCCTCATAATCAGTGTGAGGTTTATAATTATTGTGGTGATTTTGCATATTGTGATTTGTCGGATTCGGGGTCGGCTATCTGTAGTTGCTTACAAGGGTTTGAACTAAAGGATAAGGGAAATTTGTCAAGTGGGTGTAGGAGGATGACAGCTTTGAAGGCTGATCAGAAGAATGGTAGTTTTGGTGAGGATGGTTTCTTGGAGCGTAGGTCTATGAAGTTGCCTGATTTTGCACGTGTGGTTGATACTGAAGATTGTAAAGGTAATTGTTTGGAGAATGTTTCTTGTACTGCTTATGCAGAACTCAATATTGGTTGTATGGTTTGGTTTGGAGATTTGGTTGATATTCTACACTTTGAACATGGAGAAGGAAATACACTGCACATTCGTCTCGCTCATTCTGATTTAGGTGACGGAGGGAAAAATGACAAGATTGTGATTGTGATAATATTAGCTGTTCTAGCGGGGTTAATCTGCATAGGAATCATTGTATTGTTGGTTTGGAGGTACAAGAGAAGACTCAAAGCTTCATGTTGCAAAAATAGTGATGTATTACCGGTCTTTGATGCACGCAAGAGCAGAGAGATGTCAGCAGAAATTCCAGGATCGGTTGAACTTAGTTTGGAAGGGAATACACTAAGCAAAGCAGAGCTTCCATTTTTCAATTTTAGTTGCATGTCAGCAGCAACCAATAATTTTTCTGAAGAAAATAAGCTCGGGCAAGGCGGTTTCGGTCCTGTGTACAAGGGAAAGCTTCCATCTGGAGAAGAAATAGCAGTCAAGAGGCTTTCGAGACGGTCTGGCCAAGGTTTAGACGAGTTCAAGAATGAAATGAGGTTGTTTGCAAAACTGCAACATAGAAATCTGGTTAGACTCATGGGATGTTCTATTGAAGGAGATGAAAAGTTGCTTGTATATGAATTCATGCCGAACAAAAGCTTGGATCGCTTTTTATTTGATCCCACCAAGCAAACACAATTAGACTGGGCAAGACGTTATGAAATCATTGAAGGCATTGCAAGAGGACTACTTTATCTGCATCGCGATTCAAGACTTAGAATAATTCATCGAGATCTAAAAGCAAGTAACATTTTGTTAGATGAAAACATGAATCCAAAAATATCTGACTTTGGCTTGGCCAAGATATTCGGTGGAAATCAAAATGAAGACAATACAAACAAAGTGGTTGGTACATATGGTTATATGTCTCCTGAATACGCTATGGAAGGCTTATTTTCAGTCAAATCAGATGTATATAGTTTCGGTGTATTACTACTAGAGATTGTGAGCGGCCGCAGGAACACTAGCTTTCGTCACTCGGATGATTCGAGTCTGATAGGATATGCATGGCATCTTTGGAATGAACGCAGAGCAATGGAACTCGTTGATCCTTGCATTCGTGATTCGAGTCCTACAAACAAAGCTTTGAGATGCATACAAATAGGGATGTTATGTGTGCAAGATTCAGCAGCTCATAGACCAAACATGTCCAAAGTTGTGTTGATGCTTGAGAGTGAAGCAACAACTCTTCCCATAGCTACTCAGCCTTTGGGTACTTCTATGAGAAGATCCGAGGATAGAGAGTTTTACATGGATGGTCTTTATGTTTCAAATGATCTCACAGTTACAATGGTAGTGGGGAGATAG 2526 0.3923 MMLTTYQRLTLLFCFLCFCSEFSCAASPSRVSIKHGESIRDKEGEVLVSNGFNFVMGFFGFQNSSSRYVGIWYYNIPGPEVIWVANRNEPINGNGGSFTLSTNGNLVIHDGNKNQIWSTNVSIIHNNKSNSEVVLHDDGNLVLSYEKDNLWESFENPSDTYVPGMKVPVNRKGKSSFFTSWKSSTDPSLGNYTMGVDPAGLPPQIVVWEGERRTWRSGYWDGRIFTGVDMTGSFLHGFILNGDSNGERYFVYDNNNEMLLNGTRSVRFQIGWDGIEREFIWDEDEKRWIEIQKGPHNQCEVYNYCGDFAYCDLSDSGSAICSCLQGFELKDKGNLSSGCRRMTALKADQKNGSFGEDGFLERRSMKLPDFARVVDTEDCKGNCLENVSCTAYAELNIGCMVWFGDLVDILHFEHGEGNTLHIRLAHSDLGDGGKNDKIVIVIILAVLAGLICIGIIVLLVWRYKRRLKASCCKNSDVLPVFDARKSREMSAEIPGSVELSLEGNTLSKAELPFFNFSCMSAATNNFSEENKLGQGGFGPVYKGKLPSGEEIAVKRLSRRSGQGLDEFKNEMRLFAKLQHRNLVRLMGCSIEGDEKLLVYEFMPNKSLDRFLFDPTKQTQLDWARRYEIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDENMNPKISDFGLAKIFGGNQNEDNTNKVVGTYGYMSPEYAMEGLFSVKSDVYSFGVLLLEIVSGRRNTSFRHSDDSSLIGYAWHLWNERRAMELVDPCIRDSSPTNKALRCIQIGMLCVQDSAAHRPNMSKVVLMLESEATTLPIATQPLGTSMRRSEDREFYMDGLYVSNDLTVTMVVGR* 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4717 841 PIRSF SRK 1 841 IPR024171 GO:0004674
Mal4g4717 841 Pfam D-mannose binding lectin 81 182 IPR001480 -
Mal4g4717 841 ProSitePatterns Serine/Threonine protein kinases active-site signature. 647 659 IPR008271 GO:0004672|GO:0006468
Mal4g4717 841 SMART serkin_6 526 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g4717 841 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 1 841 - -
Mal4g4717 841 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 1 841 - -
Mal4g4717 841 Gene3D Phosphorylase Kinase; domain 1 495 601 - -
Mal4g4717 841 Pfam S-locus glycoprotein domain 215 330 IPR000858 GO:0048544
Mal4g4717 841 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 187 IPR036426 -
Mal4g4717 841 ProSiteProfiles Bulb-type lectin domain profile. 30 156 IPR001480 -
Mal4g4717 841 Pfam PAN-like domain 355 409 IPR003609 -
Mal4g4717 841 Gene3D - 27 154 IPR036426 -
Mal4g4717 841 CDD PAN_AP_plant 352 425 - -
Mal4g4717 841 ProSiteProfiles PAN/Apple domain profile. 339 425 IPR003609 -
Mal4g4717 841 CDD STKc_IRAK 532 797 - -
Mal4g4717 841 ProSiteProfiles Protein kinase domain profile. 526 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g4717 841 Pfam Protein tyrosine and serine/threonine kinase 529 794 IPR001245 GO:0004672|GO:0006468
Mal4g4717 841 SUPERFAMILY Protein kinase-like (PK-like) 512 824 IPR011009 -
Mal4g4717 841 CDD B_lectin 44 157 IPR001480 -
Mal4g4717 841 Gene3D Transferase(Phosphotransferase) domain 1 602 807 - -
Mal4g4717 841 SMART blect_4 38 157 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4717 Mal-Chr4 126333850 126337260 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4717 441 809 Receptor kinase-like Gene Family AT4G23230 53.243 3.27e-131 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mal4g4717 PK_Tyr_Ser-Thr 2.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4717 - - aprc:113869342 1226.46