Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4713 ATGTTGGTACTTGGTGGTGTGGGAGGAAAAATGTTACATATTTTATTCACTCTTTCAACTCTTTACATGATCAAAATTAGTAGTGCTTCTACGTACACAATTACATCCTCACAATTGATCAAAGATTCTGAAACTATAAGCTCAAACGATGATGCTTTCAAGCTTGGATTCTTCAGCCCCGTGAACACAACAAATCGCTACGTTGGAATCTGGTATCTCAATCAATCCAACATCATATGGGTAGCCAATAGAGAAAAACCTCTTCAAGATTCTTCTGGTGTTATCACCATATCTGATAACAACACAAACCTTGTAGTATTAGATGGACAAAAACATGTTATATGGTCCTCAAATGTCTCAATCTTGCATCAAATTTTAATGTCACAGCTAATCTTCAAAATAGTGGAAACCTCGTCTTGCAGGAAGACACTACAGATACTATGGGAGAGTTTCAAACATCCATCTAACGTATTTCCTCCAAATATGATAATTAGCACAAACCAAAAAACAGGGGAAAAAGTAAAAGGCACTTCTTGGAAAAGTCCTTCTGATCCAGCATTTGGAAACTTCTCTTTTAGCCTTGAGCGTCTCAATGCTCCTGAACTGTTTGTATGGAACCAAACAAAACCTTATTGGCGCTCAGGTCCGTGGAACGGTCAAGTGTTTATTGGTCTACCAAGCCGTTCGTTGAATACTTCTACATATCTAAACGGTTTCAGTGTTACAAGAAAAGATAATGGAAGTCTTGTAGAAAGTATGTATACCCTACAAAATAGTTCTTTCTTTGGAACCATTGTGGTGAATTCTGATGGCAAGCTGGTGTACACTTCGTGGATCAATAGGTATCAAGATGGGAAGCGGGATGCTCAACAAAATGATTGTGATGTTTATGGTTTTTGTGGTCCTAACGGAAGTTGTGATTCGAATAATTCGCCAATATGCACATGTTTGAAAGGTTTTGATCCAAAACACGTGAATGAATGGAATAGAAAAAATTGGACTAGTGGGTGTGTGAGAAGGGCATCACTACAATGTGAGAGGGTAAAATATAATGGTACTGCATTAGATGATGGTGAAGGAGATGGTTTTGTGAAACTAGAGATGACAAAAGTACCGGATTTTGTACAACAATCATATCTTTCTATTGATGCATGTAGAACTGAGTGCTTGAATAATTGTAACTGCACTGCTTATGCATTTGATGATGGAATTCGATGTTTGACTTGGAATGGTAATTTGATTGACATAGTCAGGTTTTCAAGTGGAGGCATCGATCTTTACATACGCCAAACTTATTCAGAACTTTCTATAGATACAAATGGGAAGAGAAATGTTACAAAAATCATCATAGCATCGGTGGTTGTGGGAGCAATTATTTTTGCTACTTCTACCTATTTCTTATGGTCATGGGCTTCTAAACATTCAGGGAGAAGGCAAAAACCAAATTCGTTGATATTGAGCACAAGCCAAATCCATTCAGAAAACCAAAATGCAAGTTTGATTGGAAATGTGAAACAAATCAAAATAGAGGACCTTCCTTTATTTGAGTTTCAAAAAATCTCAGCTGCAACAAATAATTTTGGTTCAGCTAATAAGATTGGCCAGGGTGGTTTTGGTTCAGTGTACAAGGGAGAATTGCCTGGTGGACGAGAAATAGCGGTGAAAAGACTTTCGAGAACTTCAAGACAAGGTTTAGAAGAATTTATGAATGAAGTGATTGTGATTTCAAAGCTTCAACATCGTAATCTTGTAAGACTTTTAGGTTGTTGCATCGAAGGGGAAGAAAAAATGTTGGTCTATGAATACATGCCAAATAACAGTTTAGATTTTTATCTATTTGACTCGGTAAAAACGAAGGTTTTAGATTGGCAAAAACGCTTATCTGTGATTGAGGGAATCTCTCGAGGACTACTTTATCTTCATAGAGATTCGAGATTAAGAATAATACACAGAGACCTAAAACCAAGTAATATCTTGTTGGATAGAGAACTGAATCCAAAAATATCCGACTTTGGAATGGCTAGAACTTTTGGAGGCAGCGAAAATGAGGGCAATACAAGAAGGATTGTTGGAACATAG 2079 0.3704 MLVLGGVGGKMLHILFTLSTLYMIKISSASTYTITSSQLIKDSETISSNDDAFKLGFFSPVNTTNRYVGIWYLNQSNIIWVANREKPLQDSSGVITISDNNTNLVVLDGQKHVIWSSNVSILHQILMSQLIFKIVETSSCRKTLQILWESFKHPSNVFPPNMIISTNQKTGEKVKGTSWKSPSDPAFGNFSFSLERLNAPELFVWNQTKPYWRSGPWNGQVFIGLPSRSLNTSTYLNGFSVTRKDNGSLVESMYTLQNSSFFGTIVVNSDGKLVYTSWINRYQDGKRDAQQNDCDVYGFCGPNGSCDSNNSPICTCLKGFDPKHVNEWNRKNWTSGCVRRASLQCERVKYNGTALDDGEGDGFVKLEMTKVPDFVQQSYLSIDACRTECLNNCNCTAYAFDDGIRCLTWNGNLIDIVRFSSGGIDLYIRQTYSELSIDTNGKRNVTKIIIASVVVGAIIFATSTYFLWSWASKHSGRRQKPNSLILSTSQIHSENQNASLIGNVKQIKIEDLPLFEFQKISAATNNFGSANKIGQGGFGSVYKGELPGGREIAVKRLSRTSRQGLEEFMNEVIVISKLQHRNLVRLLGCCIEGEEKMLVYEYMPNNSLDFYLFDSVKTKVLDWQKRLSVIEGISRGLLYLHRDSRLRIIHRDLKPSNILLDRELNPKISDFGMARTFGGSENEGNTRRIVGT* 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4713 692 Pfam D-mannose binding lectin 78 180 IPR001480 -
Mal4g4713 692 SUPERFAMILY Protein kinase-like (PK-like) 511 692 IPR011009 -
Mal4g4713 692 CDD PAN_AP_plant 343 429 - -
Mal4g4713 692 Gene3D Phosphorylase Kinase; domain 1 487 602 - -
Mal4g4713 692 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 26 692 - -
Mal4g4713 692 Gene3D - 25 151 IPR036426 -
Mal4g4713 692 SMART ntp_6 358 430 IPR003609 -
Mal4g4713 692 SMART blect_4 37 154 IPR001480 -
Mal4g4713 692 ProSiteProfiles PAN/Apple domain profile. 345 431 IPR003609 -
Mal4g4713 692 Gene3D Transferase(Phosphotransferase) domain 1 603 692 - -
Mal4g4713 692 CDD B_lectin 37 120 IPR001480 -
Mal4g4713 692 ProSiteProfiles Protein kinase domain profile. 527 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g4713 692 Pfam PAN-like domain 359 416 IPR003609 -
Mal4g4713 692 ProSitePatterns Serine/Threonine protein kinases active-site signature. 648 660 IPR008271 GO:0004672|GO:0006468
Mal4g4713 692 Pfam S-locus glycoprotein domain 212 323 IPR000858 GO:0048544
Mal4g4713 692 ProSiteProfiles Bulb-type lectin domain profile. 31 159 IPR001480 -
Mal4g4713 692 Pfam Protein tyrosine and serine/threonine kinase 531 679 IPR001245 GO:0004672|GO:0006468
Mal4g4713 692 SMART serkin_6 527 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g4713 692 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 26 692 - -
Mal4g4713 692 ProSitePatterns Protein kinases ATP-binding region signature. 533 555 IPR017441 GO:0005524
Mal4g4713 692 SUPERFAMILY alpha-D-mannose-specific plant lectins 68 219 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4713 Mal-Chr4 126287154 126291551 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4713 515 692 Receptor kinase-like Gene Family AT4G05200 65.730 3.24e-77 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mal4g4713 PK_Tyr_Ser-Thr 2.5e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4713 - - gmx:112998788 879.396