Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4688 ATGGGTAAGAAATCAACGAAGGAGGAGGTGAAAGAAGAATGTCCGCCGGACCATCTCCGGTGCAGCCGCACCGACGGCCGGCAATGGCGGTGCAAACGGAAAGCGATGGAAAACGTGAAGTTATGCGAGTTTCATCATCATCAAATTCGGCATCGACAGAAGAAGGATAAGGTTTCAGAGTCAGTGAAACTTCAGCGGAATATGAAGAAAAAGAAGAGGAAGAAGCAAAACGATGTCGTTGAGGTTGAAATTAGGTCAAAGAAGAAAAAGAAGAAGAGTAAGAAAAACGATGTTGTTGATGTGCAATTGGATTTGATAAGAATGGTTTTACAGAGAGAGGTTGAGAAGAAGAAGCCGAAGAAGAATGTGAAGAATGATGAAGAATTGGAATTGGGGGTGCATTACAGTGAAGGTGAATTGAGGAAAGAATTGCCTAATGGGGTTATGGAAATTGCTCCGGCTTCGACACCGTTTGATGATGTTGATTTTCACTGTAATGGTAAAGCTGTTGTTACACCACCTTACTTCAGGTCCAAGAATGTTGATAGGAGGGTCACATTTGATAATTTTCAAGTTTTGAAGAAGTGTAGGAGGAAGAAGTGTCATTGGTGTCAGAATAGTGATTCTTTGAATCTGATAAAGTGTAACAACTGCCAGAAAGAGTTTTTCTGCATGGATTGCATTAAACAAAGGTATTTCGACACTCAAAATGAGGTTAAAAAGGCGTGCCCAGTTTGTCGAGGAACTTGCACATGTAAAGATTGCCGAGCAAGTCACTGTAAAGACCGTGAAAGTAAGGATTATTTGCCTGGTACAAGCAGAGTTGATAGGATATTGCATTTTCATTATTTGGTCTGTATGCTCCTTCCGGTAATAAAACAAATAAGCGAAGACCAACGTACAGAGCTAGAAACAGAAGCGGAAAATAAAGGGGAAAGTATTTCTGATATTCTCATCAAGCAAGTTGAATCTGACTGCAATGAGAAAATTGACTGCAACTACTGCAAAACACCCATTCTGAATCTTCACAGAAGCTGCCTTAATTGTTCCTACAGTCTTTGCTTAAGATGTTGTCAGACATTAAGTCAAGGAAGCCCCTTTGAGCATATAAATTCTCCGATGACCGAGTTACCTGACAATTTGGACGCTTGCATTGCTGATGAAAGTTGCCTTTTCGAAGATAAGAGCATTTCTAGCGACGATGAAACTGATACTTCAATGTTACTGGATTCGACTGGTTGTAATGGTAACACTGACAGTATTTCATGCCCTCCTACAGAGCTAGGTGGTTGTGGTAATGACAACCTTGATTTGAGATGTGTTTTTCCCATAAGTTGGATCGAAGAAATGGAAGCTAAAGCAGAAGAGATAGTTTGCAGCTATGATGTTCCTGAACTTTTGGATAAAAATTCAAGTTGCTCACTTTGTATTGACAAAGATCATAAAACTAATAGATATAAGCAATTTCAAGAAGCTGCTCAAAGAGAAGATTCTAATGATAATTGCTTATTTTATCCTACAGTTTTCGACATTAGTTGTGATCATTTTGAGCACTTTCAGAAACACTGGGGAAAAGGCCATCCTATAGTAGTTCGAGACGTGCTCCGAAGTACGAAAAACCTCAGTTGGGATCCTCTAGTCATGTTCTGTGCTTATCTTGAAAGGAGCATTACAAGATATGAGAATAATAAGGACTTACTTGAAGCTTGTTTGGATTGGTGGGAGGTGGAAATTAACATTAGACAGCATTTTACTGGCTCTCTTAAATATCAACCTCGGAAAAATGATTGGCATGAGATGCTGAAACTAAATGGATGGTTATCTTCCCAACTATTCAAAGAACAGTTTCCAGCTCATTTTGCTGAAGTAATTGGGGCTCTTCCACTTCAAGAATACATGAATCCGAGGTTCGGCCTTCTGAATTTAGCTGCAAATATGCCAGAGGGGAGCACAAAACATGATAAAGGCCCATATGTCTATATTTCGTATGGCTGTGCTGACAACGAATCTTATTCCGTGCTAAATCTCTCTTATGACTCATATGATGTGGTTAATATTATGGCATATACCACAGATGTCCCTGTCTCTACGGAACATCTTACTAAAATAACGAAGTTATTGAAGAAGCACAGAACTCTGTGTCAAAGGGCGTCGCCAAAGATTACTACTGAGAACGCAGAAGACGAGGAACAAAAGGAACCAGAGAGTATTGTAAGTGAAGGAACCGACTTTTACAGGAAAGTCAATAGAACGTCTTACATCTCTACTGAAGTAAAAACAATAGCTAGTCGGAGTTTGGAGAACATTACTTCCAGCTATGGAGAATGTGGTTCTGGTTCTGATACTGAAAAAGCAGAAAGCTCTCTACCTTTCCACAAGACAGTTCAAAGCATTGAAATGTGTTCTGTTGCTCAGTGGGATGTCTTCCGGAGACATGATGTGCCGAAGCTTTTAGAATACCTCAAAAGACACAGTGATGAATTTTCTTATACCAATGAATATGACAGCAAGAAGATAATTCATCCAATTCTAGATCAGAGCATCTTTCTGGACACTACTCACAAAATGAGACTGAAGGAGGAGTTTGAAATCGAACCATGGACGTTTGAGCAACATGTTGGAGAAGCTATCATCATTCCTGCTGGATGTCCATACCAGATTAGGAATTCTAAGTGTTGTGTTCAAGTGGTATTGGAATTTATGTCTTCTGAGAGTGTTGCTGAATGTATCCAATTGACTGATGAGATCCATCTGCTTCCAGAAGACCATAAAGCAAAAGTAGACAAGATTGAGGTGAAGAAAATGGCTCTTGATAGCATGGAGAGGGCAATAAAAGAAATTCGGGAGCTCACTTCCAATCCAAAACATGATTGA 2874 0.3977 MGKKSTKEEVKEECPPDHLRCSRTDGRQWRCKRKAMENVKLCEFHHHQIRHRQKKDKVSESVKLQRNMKKKKRKKQNDVVEVEIRSKKKKKKSKKNDVVDVQLDLIRMVLQREVEKKKPKKNVKNDEELELGVHYSEGELRKELPNGVMEIAPASTPFDDVDFHCNGKAVVTPPYFRSKNVDRRVTFDNFQVLKKCRRKKCHWCQNSDSLNLIKCNNCQKEFFCMDCIKQRYFDTQNEVKKACPVCRGTCTCKDCRASHCKDRESKDYLPGTSRVDRILHFHYLVCMLLPVIKQISEDQRTELETEAENKGESISDILIKQVESDCNEKIDCNYCKTPILNLHRSCLNCSYSLCLRCCQTLSQGSPFEHINSPMTELPDNLDACIADESCLFEDKSISSDDETDTSMLLDSTGCNGNTDSISCPPTELGGCGNDNLDLRCVFPISWIEEMEAKAEEIVCSYDVPELLDKNSSCSLCIDKDHKTNRYKQFQEAAQREDSNDNCLFYPTVFDISCDHFEHFQKHWGKGHPIVVRDVLRSTKNLSWDPLVMFCAYLERSITRYENNKDLLEACLDWWEVEINIRQHFTGSLKYQPRKNDWHEMLKLNGWLSSQLFKEQFPAHFAEVIGALPLQEYMNPRFGLLNLAANMPEGSTKHDKGPYVYISYGCADNESYSVLNLSYDSYDVVNIMAYTTDVPVSTEHLTKITKLLKKHRTLCQRASPKITTENAEDEEQKEPESIVSEGTDFYRKVNRTSYISTEVKTIASRSLENITSSYGECGSGSDTEKAESSLPFHKTVQSIEMCSVAQWDVFRRHDVPKLLEYLKRHSDEFSYTNEYDSKKIIHPILDQSIFLDTTHKMRLKEEFEIEPWTFEQHVGEAIIIPAGCPYQIRNSKCCVQVVLEFMSSESVAECIQLTDEIHLLPEDHKAKVDKIEVKKMALDSMERAIKEIRELTSNPKHD* 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4688 957 MobiDBLite consensus disorder prediction 63 97 - -
Mal4g4688 957 Pfam JmjC domain, hydroxylase 799 899 IPR003347 -
Mal4g4688 957 Pfam WRC 16 57 IPR014977 -
Mal4g4688 957 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 11 952 IPR045109 GO:0032454|GO:0033169
Mal4g4688 957 ProSiteProfiles JmjC domain profile. 635 917 IPR003347 -
Mal4g4688 957 ProSiteProfiles WRC domain profile. 15 59 IPR014977 -
Mal4g4688 957 Gene3D Cupin 508 926 - -
Mal4g4688 957 Coils Coil 930 953 - -
Mal4g4688 957 SMART cupin_9 616 917 IPR003347 -
Mal4g4688 957 PANTHER PROTEIN B160 11 952 - -
Mal4g4688 957 SUPERFAMILY Clavaminate synthase-like 515 943 - -
Mal4g4688 957 ProSiteProfiles Zinc finger RING-type profile. 201 247 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4688 Mal-Chr4 126033652 126038980 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4688 16 102 GRF Transcription Factor Family AT4G37740 31.461 1.24e-06 50.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mal4g4688 JmjC 7.3e-10 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4688 K15601 - gmx:100799234 1251.5