Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4686 ATGGGAAGAACACCTTGTTGTGAGAAGAATAATGGTCTCAAGAAAGGACCATGGACATCCGAGGAGGATCAGAAACTCATTGATTACATTCAGAAACATGGTTATGGCAATTGGAGGACACTCCCAAAGAATGCTGGTTTGCAAAGATGTGGCAAAAGTTGTCGTCTCCGTTGGACAAACTATCTCCGACCAGATATAAAACGAGGTCGGTTTTCATTTGAAGAGGAAGAGACAATAATTCAACTACATAGCATTCTTGGCAACAAGTGGTCTGCAATTGCGTCTCGATTACCAGGAAGGACGGACAATGAAATAAAGAATTATTGGAACACACACATTAGAAAAAGGCTTCTAAGAATGGGAATTGATCCTGTAACACATAGTCCTAGACTTGACTTATTGGACCTCTCTTCTATTCTATGTTCATCTCTCTATGCTAATTCATCATCTCAAATGAACAACTTCCAAACTCTCCTTGAATTGCAACAGCCTTTGGTGAATTCTGAGCTTCTAAAGTTAGCTTCATCACTCTTCAATACCTCATCACACCAACAACAAGATTATAATCATAATCAACCTTGTAATCCTCAAATACAGAACCAAACTCCACTTTCACATTTTGTCCAATTTCAAGACCAAGTTCCACAAGTACATGCAAATGCTAGTACTAATGATTGTACTACCACATTCACTACTCCTTGTGTTTCTCCACTATCTAATCAATCACATTTATTTGAACCCAATGTGAACACATATACATCAAATTTCACCGACCTTAGTGCTCATGATATTGATTGGTACCAAAACAATGGGTTTGGTCTAAGTACTTTAAAAGAGGAGGATTATATTCCTCAATTATCAAGCTATAATAATCATTATGGTTATGATAATCAAAATCTTATGTATCAAACTTCAAATCAATTTCTAAATTCGACACCATCATCTAGTCCTACACCGTTGAATTCAAACTCCACGTGTATCGTTGGGAGCAACACAGAAGATGAGAGAGAAAGCTATGACAGTTGTAATAGGTTGAATTTTGAAATCCCTGCACATATTTTAGAGGCCAATGATTTCATGTAA 1083 0.3693 MGRTPCCEKNNGLKKGPWTSEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSILGNKWSAIASRLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHSPRLDLLDLSSILCSSLYANSSSQMNNFQTLLELQQPLVNSELLKLASSLFNTSSHQQQDYNHNQPCNPQIQNQTPLSHFVQFQDQVPQVHANASTNDCTTTFTTPCVSPLSNQSHLFEPNVNTYTSNFTDLSAHDIDWYQNNGFGLSTLKEEDYIPQLSSYNNHYGYDNQNLMYQTSNQFLNSTPSSSPTPLNSNSTCIVGSNTEDERESYDSCNRLNFEIPAHILEANDFM* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4686 360 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Mal4g4686 360 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 62 IPR017930 -
Mal4g4686 360 Gene3D - 70 117 - -
Mal4g4686 360 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Mal4g4686 360 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 276 - -
Mal4g4686 360 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 296 354 - -
Mal4g4686 360 Gene3D - 14 67 - -
Mal4g4686 360 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Mal4g4686 360 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
Mal4g4686 360 CDD SANT 70 113 IPR001005 -
Mal4g4686 360 PANTHER PROTEIN ODORANT1-LIKE 296 354 - -
Mal4g4686 360 PANTHER PROTEIN ODORANT1-LIKE 1 276 - -
Mal4g4686 360 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Mal4g4686 360 Pfam Myb-like DNA-binding domain 68 112 IPR001005 -
Mal4g4686 360 CDD SANT 17 62 IPR001005 -
Mal4g4686 360 SMART sant 67 115 IPR001005 -
Mal4g4686 360 SMART sant 14 64 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4686 Mal-Chr4 125971151 125972481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4686 1 360 MYB Transcription Factor Family AT4G21440 53.351 3.73e-113 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal4g4686 Myb_DNA-binding 1.3e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4686 K09422 - gmx:778071 438.343