Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4640 ATGGGGTTTTTGAATTTGGAGTTGCATGTGCAAATCTTTGTCACTTCCATCATCCTGATTCTAATGGGGGCTTTCTGTGTTGCAGACACTGACCCTGTTGATGTCGCAGCAATCAATAGTCTATATGTTGCTATGAACTCACCACCTCTTCAAGGGTGGAAGCCTGTTGGAGGGGATCCATGTTTAGAACTTTGGCAAGGTGTGGATTGTGTCTTCACCAACATAACTGCAATACGACTAGGAGGCTTGAATTTGGGTGGAGAGCTTGGCAGTAATTTGGATTTCCCATCCATTATAGACATTGATCTTAGCAACAACCACATTGGAGGTGCCATTCCATTCACTTTACCTCCTACGCTGAGGACCTTGTCTCTGTCAGGAAATAAGTTAAATGGAAGCATTCCAGATGCCTTATCCTTATTGACTCAATTGTCAAATTTGGATTTGGCCAATAACAACTTGACCGGTCAGCTGCCTTCCTCAATGGGGACTCTATCATCTCTTACAACATTACTGTTGCAGAACAATCAACTTGTAGGGACCCTTTTTGTTTTACAGGGCCTTCCTCTTCAGGATTTGGATATAGAGAATAATTTGTTCTCTGGGCCAATTCCTCCAAATTTGTTGACCATCCCTAATTTCAGTAAAAATGGGAATCCATTCAATACCACTATTATCCCATCTCCGCCTGTTGCTGCAGCCCCTTCCCCTGTAGCTATCGGTCGATCCCCGGAAGCATCACCTTGGTATGTGGCATATAGTCCTTCTTCTGACGTCACAGCACGGATGCCTGGAAATGTTAAAAAGTCTTTCCTAGCTGAGCATGCCATTTTGATTGCTGGTGCTGGTTTATTAATATTTATCGCTTTGGGAATTTGTCTTTTTATGATGTGGTGCTGTAAGAAAAAGCAAAAAAATAAAAATTCTCAGAAGCTTGATGTGGAGGCTTTTCCAAAAACTTTGCATAAACCTACACGGGATGACACTGTTTTCGAAGCTTCTAATCAAGATGGAAAAGCTGAGAAAACATCACGTTTAACTGAAATGCCAAATAGAAGAACGAATTTGATTCCAAAGGTTCAGGATCAACAAGAAGTATATGTCAACAAAGTATCTGCAACTTCAGAATACAAAAATGTTGCCAAACCTTCACTCCTGCAACCACCACCACATTCTCTGTCGAGCATTCCCGGTGAGAAGGTCATTGTCAATCCAGCTGCAACTACCAAAGCAACCGAAAGACAAGTTATGGCAAGTTCGGTCAAAATGTATACTGTTGCATCACTTCAGCAATATACAAATAGCTTTTCCCAAGAAAATCGTATTGGCGAAGGTACGCTTGGATCTGTTTATAGGGCCGAGCTCCCAGATGGAAAGCTGTTGGCAGTGAAGAAACTGGATGCTGCAGTTTTCAAGGACCAGAATGACGAACAGTTTCTTCAATTGGTATCCAGCATCTCGAAAATTCAGCATGCCAATATTGCAAAGTTTGTCGGCTACTGTGCTGAGTATAACCAACGATTACTTATACACGAGTATTGTAATAATGGAACCCTACATGATGCACTTCACGGCGACGACGAGCATTGTATTAAATTTCCATGGAATGCACGCATTAAGGTCGCTCTTGGAGCTGCAAGGGCTTTAGAGTATCTGCATGAGAATTTCCGGCCGCCTATTGTGCATCGAAATTTTAGATCTGTTAATGTTCTCCTGAATGAAAAGTCGGAAGCGCGTGTCTCTGATTGTGGATTAGGTCATTTGCTATCTTCTGGCACTGCTGGTCAGTTATCTGGACGCCTCCTCACAGCTTACGGTTACAGTGCTCCAGAGTTTGAGTCTGGAAGTTATACACAGCAAAGTGATGTCTTCAGTTTTGGAGTTGTAATGCTAGAACTTCTCACAGGAAGAAAATCCTACGACAGGTCACGTCCTCGTGGAGAGCAATTTTTGGTCAGATGGGCAATACCTCAACTCCATGACATTGATGCCTTGTCGAAAATGGTTGATCCTCGCTTAAATGGATCCTATTCCATGAAGTCCTTGTCACGTTTTGCAGATATTGTTTCTTCATGTATTCAGCGTGAACCCGAATTCCGGCCAGCTATGTCTGAAATTGTTCAGGATCTCTTGCTAACGATGTAA 2145 0.4261 MGFLNLELHVQIFVTSIILILMGAFCVADTDPVDVAAINSLYVAMNSPPLQGWKPVGGDPCLELWQGVDCVFTNITAIRLGGLNLGGELGSNLDFPSIIDIDLSNNHIGGAIPFTLPPTLRTLSLSGNKLNGSIPDALSLLTQLSNLDLANNNLTGQLPSSMGTLSSLTTLLLQNNQLVGTLFVLQGLPLQDLDIENNLFSGPIPPNLLTIPNFSKNGNPFNTTIIPSPPVAAAPSPVAIGRSPEASPWYVAYSPSSDVTARMPGNVKKSFLAEHAILIAGAGLLIFIALGICLFMMWCCKKKQKNKNSQKLDVEAFPKTLHKPTRDDTVFEASNQDGKAEKTSRLTEMPNRRTNLIPKVQDQQEVYVNKVSATSEYKNVAKPSLLQPPPHSLSSIPGEKVIVNPAATTKATERQVMASSVKMYTVASLQQYTNSFSQENRIGEGTLGSVYRAELPDGKLLAVKKLDAAVFKDQNDEQFLQLVSSISKIQHANIAKFVGYCAEYNQRLLIHEYCNNGTLHDALHGDDEHCIKFPWNARIKVALGAARALEYLHENFRPPIVHRNFRSVNVLLNEKSEARVSDCGLGHLLSSGTAGQLSGRLLTAYGYSAPEFESGSYTQQSDVFSFGVVMLELLTGRKSYDRSRPRGEQFLVRWAIPQLHDIDALSKMVDPRLNGSYSMKSLSRFADIVSSCIQREPEFRPAMSEIVQDLLLTM* 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4640 714 ProSiteProfiles Protein kinase domain profile. 436 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g4640 714 Pfam Protein tyrosine and serine/threonine kinase 438 710 IPR001245 GO:0004672|GO:0006468
Mal4g4640 714 PANTHER LEUCINE RICH REPEAT KINASE 2 141 711 - -
Mal4g4640 714 SUPERFAMILY L domain-like 34 212 - -
Mal4g4640 714 Gene3D Ribonuclease Inhibitor 35 229 IPR032675 -
Mal4g4640 714 SUPERFAMILY Protein kinase-like (PK-like) 416 711 IPR011009 -
Mal4g4640 714 Gene3D Transferase(Phosphotransferase) domain 1 514 712 - -
Mal4g4640 714 ProSiteProfiles Leucine-rich repeat profile. 119 141 IPR001611 GO:0005515
Mal4g4640 714 PANTHER LEUCINE RICH REPEAT KINASE 2 12 156 - -
Mal4g4640 714 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 3-LIKE ISOFORM X1 141 711 - -
Mal4g4640 714 Gene3D Phosphorylase Kinase; domain 1 399 513 - -
Mal4g4640 714 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 3-LIKE ISOFORM X1 12 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4640 Mal-Chr4 125398139 125404100 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4640 20 711 Strubbelig Receptor Gene Family AT4G03390 49.733 0.0 638
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Mal4g4640 PK_Tyr_Ser-Thr 1.7e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4640 - - gmx:100793423 964.526