Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4624 ATGAGCCTAACTCCTACCACTTCTGATACTGAGGTTTCTGCAAAAAATCTGGGACGTATCACGCAAATAATTGGTCCGGTACTCGATGTAGTTTTTCCACCAGGGAAGATGCCTTATATTTACAACGCTCTGATAGTTCAAGGTCGAGATACTGTTGGCCAACAAATTAACGTAACTTGTGAAGTACAGCAATTATTAGGAAATAATCGAGTTAGAGCTGTAGCTATGAGTGCTACAGATGGTCTAAAGAGAGGATTGGATGTGATTGACACGGGAGCTCCTCTAAGTGTTCCAGTCGGCGGAGCAACCCTAGGTCGAATTTTCAACGTGCTTGGCGAGCCTATTGATAATTTAGGTCCTGTAGATACTCGCACAACATCTCCTATTCATAGATCCGCGCCTGCCTTTATACAGTTAGATACAAAACTATCTATTTTTGAAACAGGAATTAAAGTAGTAGATCTTTTAGCTCCTTATCGCCGTGGCGGAAAAATAGGACTTTTCGGTGGAGCTGGGGTAGGTAAAACAGTACTGATTATGGAATTGATCAATAACATTGCCAAAGCTCATGGAGGTGTATCCGTATTTGGCGGAGTAGGTGAACGTACTCGTGAGGGAAATGATCTTTATATGGAAATGAAAGAATCCGGAGTAATTAATGAAAAAAATATTGAAGAATCAAAAGTAGCTCTAGTCTACGGTCAAATGAATGAACCGCCCGGAGCTCGTATGAGAGTTGGTTTAACTGCCCTAACTATGGCAGAATATTTCCGAGATGTCAATGAACAGGACGTCCTTCTATTTATCGACAATATCTTCCGTTTTGTACAAGCCGGATCCGAAGTATCTGCCCTATTGGGCCGAATGCCTTCCGCTGTGGGTTATCAACCCACCCTGGGTACTGAAATGGGTACTTTACAAGAACGAATTACCTCTACCAAAGAAGGGTCTATAACTTCTATTCAAGCAGTTTATGTACCTGCAGACGATTTGACCGATCCTGCTCCTGCCACGACATTTGCACATTTGGATGCTACTACTGTACTATCAAGAGGATTAGCTTCCAAAGGTATCTATCCAGCAGTAGATCCTTTAGATTCAACGTCAACCATGCTCCAACCTCGGATCGTTGGTGAAGAACATTATGAAACTGCGCAAAGAGTTAAACAAACGTTACAACGTTACAAAGAACTTCAGGACATTATAGCTATTCTTGGGTTGGACGAATTATCCGAAGAGGATCCAGAAGTATTTACAGGTTCTCCAGGGAAATATGTTGGTCTAGCAGAAACAATTAGAGGGTTTAAATTGATTCTTTCTGGAGAATTAGACAGTCTTCCTGAACAAGCCTTTTATTTGGTGGAACAAATTCAAGAAATGACTTTAAATCTTTGTGTACTGACCCCCAATCGAATTGTTTGGGATTCAGAAGTGAAGGAAATTATTTTATCTACTAATAGTGGACAAATCGGGGTATTAATAAATCATGCGCCTATTGCCACAGCTTTAGATATAGGTATTTTGAGAATACGCCTTAACGACCAATGGTTAACGATGGCTGTGATGGGCGGTTTTGCTATTATAGGCAATAATGAGATCACTCTTTTAGTAAATGATGCAGAAAAGGGTAGTGACATTGATCCACAAGAAGCACAACAAACTCTTAAAATAGCAGAAGCTAACTTGAATAAGGCTGAAGGGAAGAGACAAACAATTGAGGCAAATCTAGCTCTCCGACGAGCTAGGACACGGGTAGAGGCTATCAATATGATCTCGTAA 1779 0.4092 MSLTPTTSDTEVSAKNLGRITQIIGPVLDVVFPPGKMPYIYNALIVQGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLKRGLDVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGTLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDPEVFTGSPGKYVGLAETIRGFKLILSGELDSLPEQAFYLVEQIQEMTLNLCVLTPNRIVWDSEVKEIILSTNSGQIGVLINHAPIATALDIGILRIRLNDQWLTMAVMGGFAIIGNNEITLLVNDAEKGSDIDPQEAQQTLKIAEANLNKAEGKRQTIEANLALRRARTRVEAINMIS* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4624 592 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 372 460 - -
Mal4g4624 592 SUPERFAMILY N-terminal domain of alpha and beta subunits of F1 ATP synthase 16 94 IPR036121 GO:0046034|GO:1902600
Mal4g4624 592 PANTHER F0F1-TYPE ATP SYNTHASE, BETA SUBUNIT 416 464 - -
Mal4g4624 592 PANTHER F0F1-TYPE ATP SYNTHASE, BETA SUBUNIT 2 414 - -
Mal4g4624 592 PANTHER ATP SYNTHASE 416 464 - -
Mal4g4624 592 Pfam ATP synthase, Delta/Epsilon chain, long alpha-helix domain 545 588 IPR020547 -
Mal4g4624 592 Pfam ATP synthase alpha/beta family, beta-barrel domain 20 92 IPR004100 GO:0046034|GO:1902600
Mal4g4624 592 SMART AAA_5 161 353 IPR003593 -
Mal4g4624 592 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 149 369 IPR000194 GO:0005524
Mal4g4624 592 Gene3D - 464 546 IPR036771 -
Mal4g4624 592 CDD ATP-synt_F1_beta_N 16 95 - -
Mal4g4624 592 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 96 374 IPR027417 -
Mal4g4624 592 Hamap ATP synthase epsilon chain [atpC]. 460 587 IPR001469 GO:0015986|GO:0045261|GO:0046933
Mal4g4624 592 SUPERFAMILY Epsilon subunit of F1F0-ATP synthase N-terminal domain 460 541 IPR036771 -
Mal4g4624 592 CDD F1-ATPase_delta 462 582 IPR001469 GO:0015986|GO:0045261|GO:0046933
Mal4g4624 592 TIGRFAM atpD: ATP synthase F1, beta subunit 17 415 IPR005722 GO:0015986|GO:0045261|GO:0046933
Mal4g4624 592 CDD F1-ATPase_beta 94 374 - -
Mal4g4624 592 ProSitePatterns ATP synthase alpha and beta subunits signature. 360 369 IPR020003 GO:0005524
Mal4g4624 592 Hamap ATP synthase subunit beta [atpB]. 15 467 IPR005722 GO:0015986|GO:0045261|GO:0046933
Mal4g4624 592 Gene3D - 95 371 IPR027417 -
Mal4g4624 592 PANTHER ATP SYNTHASE 2 414 - -
Mal4g4624 592 TIGRFAM ATP_synt_epsi: ATP synthase F1, epsilon subunit 461 589 IPR001469 GO:0015986|GO:0045261|GO:0046933
Mal4g4624 592 Gene3D - 416 463 IPR024034 -
Mal4g4624 592 Gene3D - 372 415 IPR024034 -
Mal4g4624 592 Pfam ATP synthase, Delta/Epsilon chain, beta-sandwich domain 462 540 IPR020546 GO:0015986
Mal4g4624 592 Gene3D - 15 94 - -
Mal4g4624 592 Gene3D - 548 592 - -
Mal4g4624 592 Coils Coil 555 575 - -
Mal4g4624 592 CDD ATP-synt_F1_beta_C 376 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4624 Mal-Chr4 125011721 125013605 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4624 20 414 Primary Pumps ATPases(2) AT1G20260 26.168 4.17e-26 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4624 K02112 - han:118484095 1008.05