Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4606 ATGAGCCTAACTCCTACCACTTCTGATACTGAGGTTTCTGCAAAAAATCTGGGACGTATCACGCAAATAATTGGTCCGGTACTCGATGTAGTTTTTCCACCAGGGAAGATGCCTTATATTTACAACGCTCTGATAGTTCAAGGTCGAGATACTGTTGGCCAACAAATTAACGTAACTTGTGAAGTACAGCAATTATTAGGAAATAATCGAGTTAGAGCTGTAGCTATGAGTGCTACAGATGGTCTAAAGAGAGGATTGGATGTGATTGACACGGGAGCTCCTCTAAGTGTTCCAGTCGGCGGAGCAACCCTAGGTCGAATTTTCAACGTGCTTGGCGAGCCTATTGATAATTTAGGTCCTGTAGATACTCGCACAACATCTCCTATTCATAGATCCGCGCCTGCCTTTATACAGTTAGATACAAAACTATCTATTTTTGAAACAGGAATTAAAGTAGTAGATCTTTTAGCTCCTTATCGCCGTGGCGGAAAAATAGGACTTTTCGGTGGAGCTGGGGTAGGTAAAACAGTACTGATTATGGAATTGATCAATAACATTGCCAAAGCTCATGGAGGTGTATCCGTATTTGGCGGAGTAGGTGAACGTACTCGTGAGGGAAATGATCTTTATATGGAAATGAAAGAATCCGGAGTAATTAATGAAAAAAATATTGAAGAATCAAAAGTAGCTCTAGTCTACGGTCAAATGAATGAACCGCCCGGAGCTCGTATGAGAGTTGGTTTAACTGCCCTAACTATGGCAGAATATTTCCGAGATGTCAATGAACAGGACGTCCTTCTATTTATCGACAATATCTTCCGTTTTGTACAAGCCGGATCCGAAGTATCTGCCCTATTGGGCCGAATGCCTTCCGCTGTGGGTTATCAACCCACCCTGGGTACTGAAATGGGTACTTTACAAGAACGAATTACCTCTACCAAAGAAGGGTCTATAACTTCTATTCAAGCAGTTTATGTACCTGCAGACGATTTGACCGATCCTGCTCCTGCCACGACATTTGCACATTTGGATGCTACTACTGTACTATCAAGAGGATTAGCTTCCAAAGGTATCTATCCAGCAGTAGATCCTTTAGATTCAACGTCAACCATGCTCCAACCTCGGATCGTTGGTGAAGAACATTATGAAACTGCGCAAAGAGTTAAACAAACGTTACAACGTTACAAAGAACTTCAGGACATTATAGCTATTCTTGGGTTGGACGAATTATCCGAAGAGGATCGTTTAACCGTAGCAAGAGCACGAAAAATTGAACGTTTCTTATCACAACCTTTTTTCGTAGCAGAAGTATTTACAGGTTCTCCAGGGAAATATGTTGGTCTAGCAGAAACAATTAGAGGGTTTAAATTGATTCTTTCTGGAGAATTAGACAGTCTTCCTGAACAAGCCTTTTATTTGGTGGGTAATATCGATGAAGCTACTGCGAAGGCTACGAACTTTGAAATGGAGAACAAATTCAAGAAATGA 1488 0.4133 MSLTPTTSDTEVSAKNLGRITQIIGPVLDVVFPPGKMPYIYNALIVQGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLKRGLDVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGTLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDSLPEQAFYLVGNIDEATAKATNFEMENKFKK* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4606 495 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 149 369 IPR000194 GO:0005524
Mal4g4606 495 CDD F1-ATPase_beta 94 374 - -
Mal4g4606 495 Coils Coil 486 495 - -
Mal4g4606 495 ProSitePatterns ATP synthase alpha and beta subunits signature. 360 369 IPR020003 GO:0005524
Mal4g4606 495 Hamap ATP synthase subunit beta [atpB]. 15 487 IPR005722 GO:0015986|GO:0045261|GO:0046933
Mal4g4606 495 TIGRFAM atpD: ATP synthase F1, beta subunit 17 486 IPR005722 GO:0015986|GO:0045261|GO:0046933
Mal4g4606 495 SUPERFAMILY N-terminal domain of alpha and beta subunits of F1 ATP synthase 16 94 IPR036121 GO:0046034|GO:1902600
Mal4g4606 495 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 96 374 IPR027417 -
Mal4g4606 495 PANTHER F0F1-TYPE ATP SYNTHASE, BETA SUBUNIT 1 490 - -
Mal4g4606 495 SMART AAA_5 161 353 IPR003593 -
Mal4g4606 495 Gene3D - 15 94 - -
Mal4g4606 495 Gene3D - 95 371 IPR027417 -
Mal4g4606 495 CDD ATP-synt_F1_beta_C 376 483 - -
Mal4g4606 495 CDD ATP-synt_F1_beta_N 16 95 - -
Mal4g4606 495 Pfam ATP synthase alpha/beta family, beta-barrel domain 20 92 IPR004100 GO:0046034|GO:1902600
Mal4g4606 495 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 372 486 - -
Mal4g4606 495 Gene3D - 372 495 IPR024034 -
Mal4g4606 495 PANTHER ATP SYNTHASE 1 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4606 Mal-Chr4 124833300 124834787 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4606 20 426 Primary Pumps ATPases(2) AT1G20260 26.364 5.03e-28 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4606 K02112 - mnt:24286633 915.99