Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4574 ATGGATTCTAGCTCTGATATTTCAAGGATACTATTCAATGCTTCTTCATATGGATTTGGTGGTTCAAATGAGATTTCAAGAGGTGGGTTTGTATCAACAAACTCATTGGTTTTGGATAGTGAGAAAGGAGAATTAGTGAAGTCCCCTCCAATGATTAATGGAGAGAAAAAGATTTGTGATGCTAACAAAACTTTAGTGGCTTTGAAGAATCATAGGGAAGCAGAGAGGAGAAGAAGGAACAGAATTAATGGTCATCTTGCTAAACTTCGTGCACTAGTGCCCTCCTCTCCAAAGATGGACAAAGCAACCTTACTAGCTGAGGTTATTAGGCAAGTGAAAGAATTGAAAAAAAATGCAGATAAAGCAAGCAAAGGTTATTCAATCCCAACAGATGATGATGAAGTGAAAGTTGAACCATGTGAAAATGGTGGGGTAGATGGATCAATGCTTTACAAAGCATCTATCAGCTGTGATTACCGACCAGAACTTCTATCTGATATAAGACAAACTCTTGATACACTTCAACTACAATTGGTAAGGGAAGAAATATCAACTTTGGGAGACAGGGTTAAGAATGAGTTTGTCTACACATGTTGTAATGTAGACATTTATGATATTGAACTATGTCAACTTATTGCAAGTAATGTTCATCAGGCACTGAGTTCTGTATTGGAAAGGGCTTCTACCTCAATGGATTACTCACTAAGATCACCACGTCCTTGCAAACTGATGCAGCAGACATCTACCTTGTCATGCAACCATGAATTTTGCTCTTGTTGA 780 0.3795 MDSSSDISRILFNASSYGFGGSNEISRGGFVSTNSLVLDSEKGELVKSPPMINGEKKICDANKTLVALKNHREAERRRRNRINGHLAKLRALVPSSPKMDKATLLAEVIRQVKELKKNADKASKGYSIPTDDDEVKVEPCENGGVDGSMLYKASISCDYRPELLSDIRQTLDTLQLQLVREEISTLGDRVKNEFVYTCCNVDIYDIELCQLIASNVHQALSSVLERASTSMDYSLRSPRPCKLMQQTSTLSCNHEFCSC* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4574 259 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 70 125 IPR036638 GO:0046983
Mal4g4574 259 CDD ACT_UUR-ACR-like 154 195 - -
Mal4g4574 259 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 66 115 IPR011598 GO:0046983
Mal4g4574 259 Pfam Helix-loop-helix DNA-binding domain 70 115 IPR011598 GO:0046983
Mal4g4574 259 PANTHER DNA BINDING PROTEIN-LIKE 9 246 - -
Mal4g4574 259 Gene3D - 66 125 IPR036638 GO:0046983
Mal4g4574 259 PANTHER TRANSCRIPTION FACTOR BHLH30 9 246 IPR045847 GO:0003700|GO:0006355
Mal4g4574 259 Coils Coil 105 125 - -
Mal4g4574 259 SMART finulus 72 121 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4574 Mal-Chr4 124425386 124427505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4574 69 226 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G40200 41.104 3.49e-31 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal4g4574 HLH 1.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4574 - - mtr:MTR_2g015890 363.614