Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4542 ATGTTGAAAACGAGAGAGCAAACTCTCATTTTTCCTTCTCACACCCCCTTCTTAGAAGACCACACCCTCCCTCTCTCCCACCTCGACACCGATCGCAACCTCCACACAACCATCCGCTACCTCCGCGCTTACACCGCCACATCAACCACCAATGACCCCTTCACCGTCATCTCCTCCTCCCTCTCACAAACTCTCCTTCACTACTACCCACTCGCCGGCACACTCCGTCATCGCAACCACCCAGACCAACGTCTCGAACTCTTCTGCTCCACCAACCAAGACGGCGTTCCTCTCATCCACGCCACCGTAGATATCACTCTCGAATCCATAAACTACCTCGATGATCCATCTTCGCATTTCATCGAACAGTTGGTACCTGATCCAAACCCCGAAGAAGGATTAAACCATCCATGCATGCTTCAACTCACCGTTTTCAAGTGCGGTGGGTTCACTCTCGGTGCAGCGATTCATCACTCTCTATGCGATGGAATGGGTGGAACCCTTTTCTTCAACGCGGTGGCTGAGTTGGCTCGTGGGGGGAGTAGGATAACGGTGGAGCCGGTGTGGGAGAGAGAGAGGTTGTTGGGTCCAAGGGATGTGCCACGAGTGGATTCGACTTTGATAAGAGAGTTTTTGAGCTTAGATAAGGAGTTTTTGGTGTATGAAGAGGGTGTTGGTGGTGTTGTGAGAGAGTGTTTTGATGTGAGGGATGAGTGTTTGGAAGAGTTTAAGAGATCGTTGTTTGATCAATGTGGGTTCAAGTTCACCACTTTTGAAGCTTTAGGTGCTTACATTTGGAGGTCCAAGGTGAAGGCCTCGCAAGTGAAGGATAATGAGAAGGTTAAATTTGCATACTCAATCAATATACGTAAACTAGTAAAGCCATCACTACCTGCTGGCTATTGGGGCAACGGTTGTGTTCCAATGTATGTTCAACTTACAGAGCTGATAAGAAAGAGTAAAACTAATGTCACTGATGAGTATGTTCGTTCTTTCATCGATTATCAGCATCTGCATTTTGCTGATGGGATCACTGCAGGAAAATGGGTGAGTGGTTTCACTGATTGGAGACACTTAGGCCATTCTACTGTGGATTTTGGATGGGGAGGTCCAGTTACTGTATTGCCACTTGGTAGAAACTTGCTTGGGAGTGTTGAACCTTGTTACTTTTTACCTTATTCTACAGCTAGTGCTGAGAAGAAGAATGGGTTTAAGGTTTTGGTGAATTTGAGTGAGGTAGCTTTGCCTGCTTTTAGAGAAGACATGCAAATGTTTGCTGGTAGTCAAGAGTTGTTACCCGACTCACGCATTTGA 1314 0.4696 MLKTREQTLIFPSHTPFLEDHTLPLSHLDTDRNLHTTIRYLRAYTATSTTNDPFTVISSSLSQTLLHYYPLAGTLRHRNHPDQRLELFCSTNQDGVPLIHATVDITLESINYLDDPSSHFIEQLVPDPNPEEGLNHPCMLQLTVFKCGGFTLGAAIHHSLCDGMGGTLFFNAVAELARGGSRITVEPVWERERLLGPRDVPRVDSTLIREFLSLDKEFLVYEEGVGGVVRECFDVRDECLEEFKRSLFDQCGFKFTTFEALGAYIWRSKVKASQVKDNEKVKFAYSINIRKLVKPSLPAGYWGNGCVPMYVQLTELIRKSKTNVTDEYVRSFIDYQHLHFADGITAGKWVSGFTDWRHLGHSTVDFGWGGPVTVLPLGRNLLGSVEPCYFLPYSTASAEKKNGFKVLVNLSEVALPAFREDMQMFAGSQELLPDSRI* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4542 437 Pfam Transferase family 2 423 - -
Mal4g4542 437 Gene3D - 227 429 IPR023213 -
Mal4g4542 437 PANTHER N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE, PUTATIVE-RELATED 2 427 - -
Mal4g4542 437 Gene3D - 2 211 IPR023213 -
Mal4g4542 437 PANTHER ACYL TRANSFERASE 4 2 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4542 Mal-Chr4 124034749 124039207 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4542 34 378 Monolignol Biosynthesis Gene Families AT5G48930 28.108 1.43e-30 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4542 - - gmx:100817021 657.521