Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4535 ATGATTTTTTCTGCTCAAACTTGGTACTCAATTCCAAATCATTTGCTTTGGCTTCCTCTAATAATCTCACTTCTCTCATTCCAATGTCTTGCTAATAGTTCTCAAACTACAACAAGTGTTGGTGTGGTCATTGATGTTAATTCTGAAACAGGGAAACAACAGAGAACAGCCATGCAAATTGCAGCTCAAAGTTTCAATAATTACTCCAACTCTCAAAACATAATCCTTTTCTTCCGTGACTCTGCTAGAAACCCTTTACAAGCAGCTTCAGCTGCTGAAGAATTAATTACTAAAGAGAAAGTTAAAGTGATTATTGGCATGGAAACATGGCAAGAAGCAGCTCTTGTTGCTGATCTTGGAGCAAAATTTCAAGTACCAACAATTTCATTTTCTTCTCCTCCATTAGTCTCTTCGTCATCAATGCAACTTCGTTGGCCTTTCTTGATTCAAATGGCACAAAATCATTCTGCAGAAATGAACTTCATAGCTGAAATAGTCCATGCTTTAAACTCTCAAAAAGTTATAGCTATATATGAAGACAACCCTTATAGTAGTGATTCTGGAATGTTAAGCCTCTTATCCGATGCTCTCCAAAAGGTTAACTCGCAGATTGAACATCGATTAGTTCTTCCACCATTCACTTCTCTATCTGATCCAAAAAGGTTTGTTCTTGATGAATTGTTGAAGTTGTTGCCGCTAAAATCTCATGTTTTTATTGTACTTCAAGCATCATTACCTATCGTGAACCATTTGTTTAGAGAAGCTAAGAAAATTGGATTTTTGGAGAAAGAATCATCTTGGATAATCAATGAGGAGATTACAAGCATGTTAGTCTATGTGGATAAATCTGTTTTATCTTCTATGGAAGGTGTTTTAGGAATCAAAATCAACTATTCTACAAGCTCTAGTACTTATACTCAATTGCAGGAAAATTTCCAAGCTGAGCATACAGCAAGAGTTGAGTCCAAACCAGGATCAAATGCTTTGCTAGCTTATGATAGCATTACTGTTGTTACAAAGGCTTTGGAGAAAATGAATACTAATTTTAGTAGCTCAAAGATGTTATTGGAGGAAATGTTATCTTCCAATTTCAATGGTTTAAGGGGTAAAATAAGATTCAAAGAAAGGCAACTATCCTATACTCCAATATTAAGAGTCATAAAAGTGATTAATAATGATATGAAACATATTGAAATGGACTCTAGGACACCAAAGTTGAAGTTTTCTAGATCTCTTAGAGAGAAAACAAGTGATGATACTACAGAAATTCAGACATGGAAAATACCTACTGATGCAAACCCTTTAAAAGTTGCAATTCCTATGAGTCCTGCTTTTGATAACTTTGTGAAATTCTCTCAAAATCAACCTGTTACTGGTTTTTGTATTGAACTTTTCAAAGAGATCAGAAAAATTCTGAGTGATCAATATTCTGGTCTTCCCTACGAATTTCACCCCTTCAATGAATCTTATGATATACTTCTGCATAAAGTCATAGATAAGACCTATGATGCTATTGTAGGAGATGTAACAATACTTGCCGACCGATCAAAGAGTGTATCATTCACTCAACCATATACAGAATCAGGCTTATCACTCATATTTCCAGCAGAGAATGAAGATTCAGCATGGTTGTTTTTGAAGCCATTTAGCTGGGAAATGTGGATTGCTACTGCTGGTATCCTCATCTACACAATGATTATCATCTGGTTCTTGGAACATCACTTGAATCCTGAATTTGGTGGACCATTGAAAACGCAGATCAGCACCACTTTGTGGTTTGCTTTTTGTTCTCTATTTTTTGCTCAGAGGGAGAAAATAAACAGCAACAGTGCAAGAGTAGTAGTTGGAGTATGGTTATCTCTTGTGTTTGTTCTAACCTCAAGCTACACTGCAAATTTTTCATCATTGCTTACTGTCCAAAAATTGAGGTCTGACAGAGACATTGAATGGCTTAAACAAAACAAACTACCGGTTGGTTGTGAGAACAGTAGTACCATTGTAAAGAACTACTTGATCCAAGTGTACGACATTCCTAGCCAACAAGTTGTAGATGTTGACAATGAACAAGACATTGTTGAAAAGTTCAAGAACAAAAAAATTTCTGCTCTCTTTGTTGAGAGCCCATATGAGAAGGTTTTCTTGAATAAATACTGCAAAGATTACACTGCAACTACAGCTGCATATAAATTTGGAGGATTGGGATTTGTGAGTGCCTAA 2217 0.3572 MIFSAQTWYSIPNHLLWLPLIISLLSFQCLANSSQTTTSVGVVIDVNSETGKQQRTAMQIAAQSFNNYSNSQNIILFFRDSARNPLQAASAAEELITKEKVKVIIGMETWQEAALVADLGAKFQVPTISFSSPPLVSSSSMQLRWPFLIQMAQNHSAEMNFIAEIVHALNSQKVIAIYEDNPYSSDSGMLSLLSDALQKVNSQIEHRLVLPPFTSLSDPKRFVLDELLKLLPLKSHVFIVLQASLPIVNHLFREAKKIGFLEKESSWIINEEITSMLVYVDKSVLSSMEGVLGIKINYSTSSSTYTQLQENFQAEHTARVESKPGSNALLAYDSITVVTKALEKMNTNFSSSKMLLEEMLSSNFNGLRGKIRFKERQLSYTPILRVIKVINNDMKHIEMDSRTPKLKFSRSLREKTSDDTTEIQTWKIPTDANPLKVAIPMSPAFDNFVKFSQNQPVTGFCIELFKEIRKILSDQYSGLPYEFHPFNESYDILLHKVIDKTYDAIVGDVTILADRSKSVSFTQPYTESGLSLIFPAENEDSAWLFLKPFSWEMWIATAGILIYTMIIIWFLEHHLNPEFGGPLKTQISTTLWFAFCSLFFAQREKINSNSARVVVGVWLSLVFVLTSSYTANFSSLLTVQKLRSDRDIEWLKQNKLPVGCENSSTIVKNYLIQVYDIPSQQVVDVDNEQDIVEKFKNKKISALFVESPYEKVFLNKYCKDYTATTAAYKFGGLGFVSA* 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4535 738 Gene3D - 543 678 - -
Mal4g4535 738 SUPERFAMILY Periplasmic binding protein-like I 35 393 IPR028082 -
Mal4g4535 738 Gene3D - 154 398 - -
Mal4g4535 738 PANTHER GLUTAMATE RECEPTOR 3 736 - -
Mal4g4535 738 SMART GluR_14 436 658 IPR001320 GO:0015276|GO:0016020
Mal4g4535 738 Pfam Bacterial extracellular solute-binding proteins, family 3 453 717 IPR001638 -
Mal4g4535 738 Pfam Receptor family ligand binding region 55 378 IPR001828 -
Mal4g4535 738 Gene3D - 430 542 - -
Mal4g4535 738 SUPERFAMILY Periplasmic binding protein-like II 424 736 - -
Mal4g4535 738 Pfam Ligand-gated ion channel 550 645 IPR001320 GO:0015276|GO:0016020
Mal4g4535 738 Gene3D - 48 381 - -
Mal4g4535 738 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 3 736 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4535 Mal-Chr4 123890919 123894135 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4535 29 736 Ion Channels AT2G29120 32.338 3.36e-108 350