Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4533 ATGCATTTCCTTTCAACTACTCCTCAAGCACTTTCAAGAATATGGCTATTATTTTTCTTACTCAACCCTTTTGTTTTCATTTACGGTATCCGAGATAAGACTATCAATTCAAACAACTATGTCATATCCATTGGGGTGATCATTGATGTTAATTCTCGTATTGGGAAAGAACAAGAAGTAGCCATGGACATTGCAGCCAAGAGTTACAACAACACTTCAAAGAACTACAAGTTAGCTCTCTATTTCCAGAACTCCACCAAGGATACCCTCAAGGCCATCAAAATTGCTGAAGAGATGATTAATGTACAAAAGGTGCAAGTGATTATAGGGATGCACACATGGCCAGAAGCAGGTATAGTTTCTGAAATAGGAAAAAAAGCTCAAGTTCCTATCATATCTTTTGCAGTTCCTACCATAACCCTACCGTTGATGAAAGCTCGATGGCCTTTTCTGGTGAGACTTGCTAACAATGGTACAACATATATAAGTTGCATTGTAGAAATAGTGCAGACTTATAGTTGGAAGAAAGTAGTAGTAATCTACGAAGATGAAGGGTACGGTGGAGATAATGGTATGCTAGCTCTTCTATCTGAGGCACTTCAGGATGTGGATTCAATGATTGAGCACCGCTTAGTCCTTCCACCAATTTCTTCTCTACATGATCCAGGGAAGCTAGTTAGTGAAGAAATGGTAAAGTTAAAACAAACACAATCTCGGGTGTTCATAGTGCTGCAATCATCATTAGAAATGGCAATTCATTTGTTCAAAGAAGCTTCAAAAGTTGGACTAGTAGATAAAGAATCGGTTTGGATGATCCCGGAGAGCGTAACTAATTTGCTGGACTCTGTCAATAAGTCTGCTATTTCTTATATGGAAGGTGCTTTAGGAATTAAGACCTACTACTCAGAAAGAAGCAGGGAGTATCAAGAATTTGAGGCTCAGTTTCGGAGAACATTTTGGTCAAAGAATCCGGAGGAAGATAACCGATACCCAGGATTTTATGCTCTACAAGCATATGATAGCATTAACATTGTAACTCAAGCTTTCAACAGAATGACCAGTAGGAACAATAGCATCCCAAGGACTTTACTAAGAGAAATACTGTCTAGCAATTTCCTTGGTTTAAGTGGCCCTATTCAACTTGAAGCTGGACAAGTCATGCAGAAGAATCTTGTCTTAAGGATAGTAAACGTGGCTGGGAAGAGTTACAAAGAATTATGCTTTTGGACTCAACAACATGGCTTTACTACAATCCAGCATGCAGGACAAGGTGGAAATAATGTTGCTAGAAATACGGAATGTCTCAGGGGTGTGCGGTGGCCTGGGAACTTACCCCGCGATCCAAAGGGCTGGAACATGCCTACTGAAAAAAATCCTTTGAGAATCGCAGTCAGAAGCAGAACCTCGTTTTCCAGGTTTGTCAAGGTTGAGTATGGCCAGAATGGAGGAGAGCCTGAATATAGTGGATTCTGCATTGAAATTTTTGAGCATGTACAAAAACTTTTGGGGTACAATCTGCCATCTAAATATTATCCCATCAATGGAACCTATGATGATTTGGTTCAGCTTGTCTATAACAAGACTTACGATGCTGTTGTTGGGGACATGACCATAATAGAGGAAAGATTGCAGTATGTGGATTTTACAGTGCCATATGCAGAATCAGGCTTGTCAATGATAGTTCCGATGAAGCCTGGAGAGTCGGCATGGATGTTTATGAAGCCATTTACCTGGGAATTGTGGCTGGTTACAGGTGCAATCTTGATTTACACAATGTTTGTTGTTTGGTATCTCGAGAGAGAACCCAATCCAGAGTTTCATGGAAACTGGAAGCTCCAGCTCAGCACAACTCTTTGGTTTACCTTCTCCTCTTTGTTCTTCGCTCATAGGGAAAAAATGCACAGCAACTTAACTCGAGTGGTGATGGTCTCGTGGCTCTTTCTTGTATTGATTCTCACCTCAAGCTACACAGCTAGTCTTTCTTCAATGCTCACAGTTAAACAGTTGCGACCGAATGTCACAGACATTCAGTGGCTGAAGAATAACAACAAGAAAATTGGCTGTGACGGCGACTCATTTGTTAGGACATTCCTAGAGAAAGTTGAAAAGTTCAAGCCAGAGAATATCATTAACATTACCGATGAATACAAGTATGATGATGCATTCGCTAATAACAGCATAGCAGCTGCTTTTCTTGAGCTCCCATATGAAAAAGTATTCATCAGTGAATACTGCAAGAGATACACTGGCTTCACTCCTAGAACTAGATTTGGAGGATTGGGCTTTATGTTCCAGAAAGGCTCTCCTCTGGCCAGAGACGTATCGAAAGCTATATTAAATCTCTCAGAAAACGCAGAGTTGAAGAGATTGGAAGAAAAGTGGTTAATTACCTCACAGGATTGCTCCAACAACGTTACATCATCGAACGATACAGATAGTTTGAATCTTGGAAGCTTATGGGTTTTATATGTCATCTCTGGTGCCACTTCTACTATTTGTGTGCTAATATCAACCATCAAGTATCTAAAATCCAATCATCAACATGAAGACTTGCCACCCGAAGAAGGCAATGGCACACCAAATGATGAAAGGGTGTGGGAAAAGGCTATTACATTTGCAAAGAAGATTTATAGCAAAAAGCTTAATAATTCAAGCAAGGAACAGGATGTAACTGACTATTCTTCGAGATCAGGTCATGCGAGCATCGCTGATACTCGTGAGCATTCACAGGAATTCACTTCTCCGCAAAACGATGTATATATGACAAGTACAACATGTGACATAGGAACCATGGAACCACATAGACTTCAAAATAATTGCCATATCAGACACTGTACAAACCCAGTTTAA 2850 0.4021 MHFLSTTPQALSRIWLLFFLLNPFVFIYGIRDKTINSNNYVISIGVIIDVNSRIGKEQEVAMDIAAKSYNNTSKNYKLALYFQNSTKDTLKAIKIAEEMINVQKVQVIIGMHTWPEAGIVSEIGKKAQVPIISFAVPTITLPLMKARWPFLVRLANNGTTYISCIVEIVQTYSWKKVVVIYEDEGYGGDNGMLALLSEALQDVDSMIEHRLVLPPISSLHDPGKLVSEEMVKLKQTQSRVFIVLQSSLEMAIHLFKEASKVGLVDKESVWMIPESVTNLLDSVNKSAISYMEGALGIKTYYSERSREYQEFEAQFRRTFWSKNPEEDNRYPGFYALQAYDSINIVTQAFNRMTSRNNSIPRTLLREILSSNFLGLSGPIQLEAGQVMQKNLVLRIVNVAGKSYKELCFWTQQHGFTTIQHAGQGGNNVARNTECLRGVRWPGNLPRDPKGWNMPTEKNPLRIAVRSRTSFSRFVKVEYGQNGGEPEYSGFCIEIFEHVQKLLGYNLPSKYYPINGTYDDLVQLVYNKTYDAVVGDMTIIEERLQYVDFTVPYAESGLSMIVPMKPGESAWMFMKPFTWELWLVTGAILIYTMFVVWYLEREPNPEFHGNWKLQLSTTLWFTFSSLFFAHREKMHSNLTRVVMVSWLFLVLILTSSYTASLSSMLTVKQLRPNVTDIQWLKNNNKKIGCDGDSFVRTFLEKVEKFKPENIINITDEYKYDDAFANNSIAAAFLELPYEKVFISEYCKRYTGFTPRTRFGGLGFMFQKGSPLARDVSKAILNLSENAELKRLEEKWLITSQDCSNNVTSSNDTDSLNLGSLWVLYVISGATSTICVLISTIKYLKSNHQHEDLPPEEGNGTPNDERVWEKAITFAKKIYSKKLNNSSKEQDVTDYSSRSGHASIADTREHSQEFTSPQNDVYMTSTTCDIGTMEPHRLQNNCHIRHCTNPV* 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4533 949 CDD GluR_Plant 458 795 - -
Mal4g4533 949 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 23 919 - -
Mal4g4533 949 Gene3D - 38 161 - -
Mal4g4533 949 Gene3D - 162 333 - -
Mal4g4533 949 Pfam Receptor family ligand binding region 59 391 IPR001828 -
Mal4g4533 949 SMART GluR_14 459 797 IPR001320 GO:0015276|GO:0016020
Mal4g4533 949 Pfam Bacterial extracellular solute-binding proteins, family 3 484 795 IPR001638 -
Mal4g4533 949 SUPERFAMILY Periplasmic binding protein-like I 39 451 IPR028082 -
Mal4g4533 949 Gene3D - 570 707 - -
Mal4g4533 949 CDD PBP1_GABAb_receptor_plant 43 416 IPR044440 -
Mal4g4533 949 Gene3D - 724 802 - -
Mal4g4533 949 PANTHER GLUTAMATE RECEPTOR 3.4 23 919 - -
Mal4g4533 949 PIRSF IGluLR_plant 10 940 IPR017103 -
Mal4g4533 949 Gene3D - 454 569 - -
Mal4g4533 949 MobiDBLite consensus disorder prediction 887 916 - -
Mal4g4533 949 Pfam Ligand-gated ion channel 796 827 IPR001320 GO:0015276|GO:0016020
Mal4g4533 949 SUPERFAMILY Periplasmic binding protein-like II 438 795 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4533 Mal-Chr4 123850144 123853761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4533 8 848 Ion Channels AT2G29120 32.990 1.76e-147 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4533 - - mtr:MTR_2g015270 1597.02