Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4525 ATGATATCTATTTCTCTAATTCCTCATTTATGTGTTTATACCAACATGGAGAATATTCACATTCACAATAGTAATAATCATCATGCAGCTACTGAAGGATCAATTCTTGAGAATGTATGGGCTAAAATTATAAGCAATGATGGAAGAACAAATGTAAATGAAGCAGAATGTTCTAACACATGGGGAGAATTGCCTAATCTTGACGAAAGAGACGGTTCGATGGAAATACTTCAAAGGCTTCCAAGTTTAGGAAGATGGATATCAATGGGAGCAGATTATTGGGAAGAGCTTTTAGATGATATTCTACCAATTACTGCAATAAGCAATACAGAAGATTTTTCATGCAACAAAAAGATGGAAATTGAAAGTGTGAATAAATCAAATTCAAAGGAAAAAGTAGAAGAAGATGGTGTGAGAAAAGAGAAAAAAAGAGTTGAAAAACATTATAGAGGAGTAAGGAGAAGACCATGGGGTAAATATGCAGCTGAAATTAGAGACTCATCAAAGAAAGGTGCAAGAGTTTGGCTTGGTACATTTAATACAGCTGAAGAAGCTGCTTTAGCTTATGATAAAGCTGCTTTGAGAATTAGAGGTTCAAAAGCATGTCTTAATTTTCCAATTCAGACAGTTACAAATACAAACACTTTAGAATGTGGTAAAAAAGGAATTGAACATGATGTTACAAAGAGAGAAAGTTTATTGGATTCAAGAAAGAGAGGATTAAGGGACAGAGGAGAATTTGTTGATGTGATGAATACTGAACAACCTGCAACCAAAAAGATGGCAGGGTTGGAATTGGAAGACATGTTAGAAAATGATGCTTTTGTATTTCAGGATCTAGGAATTGATTATTTGGATAGTTTGTTGTCTTCTTTTTGA 879 0.3379 MISISLIPHLCVYTNMENIHIHNSNNHHAATEGSILENVWAKIISNDGRTNVNEAECSNTWGELPNLDERDGSMEILQRLPSLGRWISMGADYWEELLDDILPITAISNTEDFSCNKKMEIESVNKSNSKEKVEEDGVRKEKKRVEKHYRGVRRRPWGKYAAEIRDSSKKGARVWLGTFNTAEEAALAYDKAALRIRGSKACLNFPIQTVTNTNTLECGKKGIEHDVTKRESLLDSRKRGLRDRGEFVDVMNTEQPATKKMAGLELEDMLENDAFVFQDLGIDYLDSLLSSF* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4525 292 CDD AP2 147 208 IPR001471 GO:0003700|GO:0006355
Mal4g4525 292 Pfam AP2 domain 148 198 IPR001471 GO:0003700|GO:0006355
Mal4g4525 292 Gene3D AP2/ERF domain 147 209 IPR036955 GO:0003700|GO:0006355
Mal4g4525 292 PRINTS Ethylene responsive element binding protein signature 149 160 IPR001471 GO:0003700|GO:0006355
Mal4g4525 292 PRINTS Ethylene responsive element binding protein signature 172 188 IPR001471 GO:0003700|GO:0006355
Mal4g4525 292 SUPERFAMILY DNA-binding domain 148 207 IPR016177 GO:0003677
Mal4g4525 292 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 37 292 - -
Mal4g4525 292 SMART rav1_2 148 212 IPR001471 GO:0003700|GO:0006355
Mal4g4525 292 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF091 37 292 - -
Mal4g4525 292 ProSiteProfiles AP2/ERF domain profile. 148 206 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4525 Mal-Chr4 123739145 123740023 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4525 32 292 AP2-EREBP Transcription Factor Family AT4G18450 34.921 2.75e-39 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mal4g4525 AP2 2.8e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4525 - - lang:109334345 299.671