Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4522 ATGGCTTCATCAAATAGACACTGGCCAAGCATGTTTAAGTCTAAGCCCTGCAACACTCATCACCAATGGCAACATGACATCAACTCTTCTCTCATCTCTTCTGCTTGCCACAGAACCCCTTACTCTTCAGGTTGTGAGGAGAGAAGTCCTGAGCCAAAGCCAAGGTGGAATCCAAAACCAGAACAAATCCGGATACTTGAAGCTATCTTCAACTCTGGAATGGTGAATCCACCAAGAGAAGAAATAAGGAAGATTAGAGCACAGTTGCAAGAGTATGGTCAAGTTGGTGATGCTAATGTTTTCTATTGGTTCCAAAACCGAAAATCAAGAAGCAAACATAAGCTTCGCCATCTTCAAAACCAAAACTCAAAGAACCAGAATCAGAATCAGGATCAATCATCACAACAAAACCATGTTTCACTTCCTCAAATCACTTCTACTGCACCTTCATCTTCATCATCTTCCTCTGACAAATCTCCACCAAAAGAATTAATACCTTCTAAGGTATTTTCTCTTGGTTTCCCTAACATCAATGATGTTGTTCCTAATTCTCCAACTACTTCTGTGAACCAAAACCAAACATATTTTCATCCTCAAAATGGAACCATCCTTGTTCCACCACCACCACCACCACAAGTAACTGCACCACCAACTGAGAATTTCTTCTTCCCAGTGCAACATCATGGACAAGGAACAATACTTTCTAACAATGCCTCATCATCACAAGGGTTTTGCTTCTCTGAACTTTCCAACATGGTTCATGCTCAGCAACAACATAACACTGGTAATTGCACTACTAGTTTTCTGCTTAGTGAGATCATGAACAGCCATGGTGTTAATCCGTCAAAGAAAGATCAAGATCAGGATAAGTCTGTCAAACTAATGCACCAAATCCCACATCTCAACTTCTGTTTCACCCCTACAACTACTACTGTTGCACCCCCCACAACTTCCTCCACCATCACTGTTCCATCCCCTATAATTCCTCAAGTTCAAGGCATTGGTGAACCATGTGTTGCTGCGAAATCTGTGGTGTTCATCAATGATGTGGCGTTTGAAGTGGCATCTGGACCTTTCAACGTCCGTGCAGCATTTGGTGATGATGCTGTCCTCATCCATTCAACTGGTCAACAAGTTTTAACAAATCAATGGGGTGTCACACTCCATTCTCTCCAGCATGGTGCATGTTATTACCTTATATAG 1203 0.419 MASSNRHWPSMFKSKPCNTHHQWQHDINSSLISSACHRTPYSSGCEERSPEPKPRWNPKPEQIRILEAIFNSGMVNPPREEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKHKLRHLQNQNSKNQNQNQDQSSQQNHVSLPQITSTAPSSSSSSSDKSPPKELIPSKVFSLGFPNINDVVPNSPTTSVNQNQTYFHPQNGTILVPPPPPPQVTAPPTENFFFPVQHHGQGTILSNNASSSQGFCFSELSNMVHAQQQHNTGNCTTSFLLSEIMNSHGVNPSKKDQDQDKSVKLMHQIPHLNFCFTPTTTTVAPPTTSSTITVPSPIIPQVQGIGEPCVAAKSVVFINDVAFEVASGPFNVRAAFGDDAVLIHSTGQQVLTNQWGVTLHSLQHGACYYLI* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4522 400 MobiDBLite consensus disorder prediction 112 166 - -
Mal4g4522 400 Pfam Homeodomain 53 113 IPR001356 GO:0003677
Mal4g4522 400 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 400 IPR044557 GO:0003700|GO:0050793
Mal4g4522 400 ProSiteProfiles 'Homeobox' domain profile. 49 114 IPR001356 GO:0003677
Mal4g4522 400 SUPERFAMILY Homeodomain-like 49 117 IPR009057 -
Mal4g4522 400 Gene3D - 53 120 - -
Mal4g4522 400 SMART HOX_1 51 118 IPR001356 GO:0003677
Mal4g4522 400 MobiDBLite consensus disorder prediction 120 161 - -
Mal4g4522 400 MobiDBLite consensus disorder prediction 39 60 - -
Mal4g4522 400 CDD homeodomain 52 114 IPR001356 GO:0003677
Mal4g4522 400 Coils Coil 115 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4522 Mal-Chr4 123711482 123713747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4522 1 120 Wox Gene Family AT2G33880 87.705 2.72e-68 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Mal4g4522 Homeodomain 5.7e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4522 - - mtr:MTR_2g015000 637.106