Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4499 ATGTCAGAAGAGGAAAGTAATAATTCATTTGATTGTTCTAAAAAATGGTCTTCCTTTGATTTGAATGAAGAAGCTACTAGTGAAGATAACAATCATGAAGCAATACTTGAGGAGAATGAGAATGAGAAGGAAAATATTGAAGGTAGTTATTCAGGTTCAGGAAATTATAGTAATAGTATATCAAGAGAAGAAGGAAATAATGAAAGAGGAGGCAAAAAGGTTAGACATTATGTTAGATCAAAGATGCCTAGGCTAAGGTGGACTCCTGAGCTTCATCATTCTTTTTTGCATGCTGTTGATAGACTTGGTGGTCTAGAGAGAGCAACACCCAAGTTGGTACTTCAGCTAATGAATGTTAGAGGACTCAACATTGCTCATGTCAAGTCTCACTTGCAGATGTATCGAAGCAAGAAACTTGACCAGTTCGGACAAGTACTATGCCAAACACAAAGGTCAGCACAAGAAGTTGATAGATCTCAGAAACTCCATCTAAGTCAACATTTTAAGATGGGTAATGGTGGTATTATTCTATCAAGTAGTTACAATGAGCAGCATCATAGTCCTCAATATTTCCCAACTCTCCTGCAGCCGCGCTCTTCCTTCTACCCATCACATAATTATTCACATACAAACTCAACCCATCATGATGATTCAAGGCACCAACATTGGCACTTCAATCATCAACCTTTTAGAATTGCACCTGTGACACCAAGCCAATTTCTTGAAGAGAAAAATTGGTCTCCATTTGAAATCATGAACAATATTCATCAACCTAAATTCAAAAGGCTACTTTCCAATGTAACTTCTAAAACTTGGTCACAGCCTATTGAGCAAGTTGAACGGAACAACACAAATAGAAGTATTACAAATAATACTGAAAATTTATTGAAGTCCAAAGAAACTTGCAACTCTTCCACAAGTTTATTGCTACAATTTGAGGCCCCATTTCGGATCAAGTTAAATCAAGAGAAAGTATATATAGACGAGAAAAGGTTATTGCCTGATTTGCAACTTGGTTTGAGTCACACATATGGAACCGATGATGGTAAGATTGATCATTGTAGAGAGATCAAGGAAATTAGCACTACGCTATCACTTTCTTAG 1104 0.3668 MSEEESNNSFDCSKKWSSFDLNEEATSEDNNHEAILEENENEKENIEGSYSGSGNYSNSISREEGNNERGGKKVRHYVRSKMPRLRWTPELHHSFLHAVDRLGGLERATPKLVLQLMNVRGLNIAHVKSHLQMYRSKKLDQFGQVLCQTQRSAQEVDRSQKLHLSQHFKMGNGGIILSSSYNEQHHSPQYFPTLLQPRSSFYPSHNYSHTNSTHHDDSRHQHWHFNHQPFRIAPVTPSQFLEEKNWSPFEIMNNIHQPKFKRLLSNVTSKTWSQPIEQVERNNTNRSITNNTENLLKSKETCNSSTSLLLQFEAPFRIKLNQEKVYIDEKRLLPDLQLGLSHTYGTDDGKIDHCREIKEISTTLSLS* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4499 367 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 4 227 IPR044848 GO:0003700
Mal4g4499 367 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 230 367 IPR044848 GO:0003700
Mal4g4499 367 MobiDBLite consensus disorder prediction 21 45 - -
Mal4g4499 367 SUPERFAMILY Homeodomain-like 81 137 IPR009057 -
Mal4g4499 367 MobiDBLite consensus disorder prediction 21 72 - -
Mal4g4499 367 Pfam Myb-like DNA-binding domain 85 135 IPR001005 -
Mal4g4499 367 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 79 139 IPR017930 -
Mal4g4499 367 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 83 138 IPR006447 GO:0003677
Mal4g4499 367 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 4 227 - -
Mal4g4499 367 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 230 367 - -
Mal4g4499 367 Coils Coil 22 42 - -
Mal4g4499 367 MobiDBLite consensus disorder prediction 46 64 - -
Mal4g4499 367 Gene3D - 82 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4499 Mal-Chr4 123349509 123353511 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4499 74 140 G2-like Transcription Factor Family AT2G42660 76.119 1.45e-30 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mal4g4499 Myb_DNA-binding 1.2e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4499 - - mtr:MTR_2g016220 597.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g4499 4 123349509 123353511 Mal4g4499 4 123349509 123353511 ECH
Mal7g4343 7 110632069 110635166 Mal4g4499 4 123349509 123353511 PCT