Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4494 ATGGCTGACGTGCTTTTACAGAAGGTGAAAACATCATCAAACAGCAACAGCAAGAAGGACTCATCGAATCTGTTATTGGGTCGTTTCGAAATTGGGAAGCTTCTTGGCCATGGAACATTTGCAAAGGTTTACTATGCAAAAAACATCAAAACCGATGAAGGTGTAGCTATAAAGGTGATAGACAAAGAGAAAATCTTAAAGGGTGGTTTGGTTGCACATATCAAACGTGAGATCTCAATTCTTCGCCGTGTTCGACACCCGAATATCGTTCAATTGTTTGAGGTAATGGCTACAAAAACAAAGATCTATTTTGTGATGGAATATGTTCGTGGGGGTGAGCTTTTTAACAAGGTTGCTAAGGGGAGATTGAAGGAAGATGTTGCTAGAAAGTATTTTCAACAATTGATTTCAGCTGTTGGATTTTGTCATGCTAGAGGTGTTTATCATAGGGATCTTAAGCCTGAAAATTTGTTGCTTGATGAGAATGGTAATTTGAAAGTGTCTGATTTTGGTTTGAGTGCTGTTTCTGATCAAATTAGACAAGATGGTTTGTTTCATACTTTTTGTGGTACTCCTGCTTATGTTGCACCTGAGGTTTTGGCTAGGAAAGGTTATGATGGTGCTAAGGTTGATCTTTGGTCTTGTGGTGTTGTTTTGTTTGTTTTGATGGCTGGTTATTTACCTTTTCATGATCAAAATGTTATGGCAATGTATAAGAAGATTTATAAGGGTGAGTTTAGATGTCCTAGGTGGTTTTCACCTGATTTGTCTAAACTGCTTATTCGTCTTCTTGATACTAAGCCTGAAACTAGGATTGCTATACCCGAGATTATGGAGAATAGGTGGTTTAAAAAAGGGTTTAAACAGATTAAGTTTTATGTTGAGGATGATAGGCTTTGTAATGTTGATGATGGTTTTGGTGACAATGATGATGATACAGCTTCTATAACATCTGTAGCGTCGTTTTCTGATTACGCGGTTTCGGAATCTGATTCTGAGGTTGAGACTAGAAGGAGAAATGCTCCTTTGCCTAGACCTGCTAGTTTGAATGCTTTTGACATTATTTCGTTCTCGCCTGGTTTTGATCTTTCTGGTTTGTTTGAGGAAAAAGGAGATGAGAATAGGATTGTGACTGCTGCGCCGGTTTCGAAGATCATATCTAAATTGGAAGAGATTGCTCAATTGGTTAGTTTTTCTGTGAGGAAGAAAGATTGCAGGGTTAGCTTGGAGGGAACAAGAGAAGGCGTGAAGGGACCGTTGACTATTGCTGCTGAGATATTTGAACTAACACCTTCTTTGGTTGTTGTTGAGGTGAAGAAAAAAGGAGGGGACAGAGCCGAATATGAGAGATTTTGTAATGAAGAATTGAAACCTGGATTGCAGAATTTGACGGTGGAGGAATCAGCAACTTCTTCAGCTTTATCACTGGAATCAGCAACTTCTTCAGCTTTGTCGCTGCCTGAAGAGCCTACCTTGCTTCGCGTGCTTTCTGAACCAGTTCACAACATGACTTCGGATATGGAATCGCCGCTCTATTTACCTGAGCTTTCTGAACCAGTTCACAACATGACTCCGGATATGGAATCGCCGCTCTATTTACCTGAAGAGTGA 1611 0.3985 MADVLLQKVKTSSNSNSKKDSSNLLLGRFEIGKLLGHGTFAKVYYAKNIKTDEGVAIKVIDKEKILKGGLVAHIKREISILRRVRHPNIVQLFEVMATKTKIYFVMEYVRGGELFNKVAKGRLKEDVARKYFQQLISAVGFCHARGVYHRDLKPENLLLDENGNLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLARKGYDGAKVDLWSCGVVLFVLMAGYLPFHDQNVMAMYKKIYKGEFRCPRWFSPDLSKLLIRLLDTKPETRIAIPEIMENRWFKKGFKQIKFYVEDDRLCNVDDGFGDNDDDTASITSVASFSDYAVSESDSEVETRRRNAPLPRPASLNAFDIISFSPGFDLSGLFEEKGDENRIVTAAPVSKIISKLEEIAQLVSFSVRKKDCRVSLEGTREGVKGPLTIAAEIFELTPSLVVVEVKKKGGDRAEYERFCNEELKPGLQNLTVEESATSSALSLESATSSALSLPEEPTLLRVLSEPVHNMTSDMESPLYLPELSEPVHNMTPDMESPLYLPEE* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4494 536 CDD STKc_SnRK3 28 282 - -
Mal4g4494 536 SUPERFAMILY Protein kinase-like (PK-like) 25 284 IPR011009 -
Mal4g4494 536 Gene3D Kinase associated domain 1, KA1 344 465 - -
Mal4g4494 536 Pfam Protein kinase domain 29 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g4494 536 Gene3D Transferase(Phosphotransferase) domain 1 19 339 - -
Mal4g4494 536 ProSiteProfiles NAF domain profile. 344 368 IPR018451 GO:0007165
Mal4g4494 536 CDD CIPK_C 350 461 - -
Mal4g4494 536 ProSiteProfiles Protein kinase domain profile. 29 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g4494 536 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672|GO:0006468
Mal4g4494 536 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 10 475 - -
Mal4g4494 536 ProSitePatterns Protein kinases ATP-binding region signature. 35 58 IPR017441 GO:0005524
Mal4g4494 536 Pfam NAF domain 346 402 IPR004041 GO:0007165
Mal4g4494 536 PANTHER - 10 475 - -
Mal4g4494 536 SMART serkin_6 29 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4494 Mal-Chr4 123291719 123293329 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4494 24 492 CBL-interacting serine-threonine protein kinases AT4G18700 78.298 0.0 755
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Mal4g4494 Pkinase 4.2e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4494 - - gmx:100790133 873.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g4494 4 123291719 123293329 Mal4g4494 4 123291719 123293329 ECH