Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4493 ATGAAGCAATTTTATAGATTCTTGATTCTTCTATCACTTTTTACTTTCACACAATCATCTTCATGCAATAGTGAAAACAAGAACCTTATATCAAAAGCCTTTCAATCTGTCCAAGGATTCAACACTTCCTTATTCCAAACAAAAAGTTTCAACTGTTCAAAGGGTCAAATTAACATCATAGAACTTCCATCCAAAAACTTGAGTGGCAACATCTCATGGAGATACCTAAGAAACATGACAAACTTAGAGTTTCTTGATCTTTCAGGTAATTCTCTACAAGGTCAAGTTCCAAACTGGTTTTGGTCAAGTAGTTCAAATTTATCAACAGTGAATCTCTCAAATAATAGATTTGGTGGAAGCATTGCATTCAAAACAAAACCCATTTCCCAAAATGGTTCATTTTTCACTTCATCACTACAAAATCTCAATCTCTCACACAATAGATTCACAAATCAACTTCATCTTTCGTTTTTTGAAAACCTTAAAATCCTCGACCTTTCACACAACAACCTCAACACTTTACCTTCAGGTTTTCAAAACCTTACTAAACTCAACTACCTCGATCTCTCAAACTGTAACATCATAGGAAACATCAAACCCATTTCTTATCTTAAATCACTCTCTTTCTTAAACCTTTCAAACAACTCTTTGAATGGTACTTTCACTTCAGATTTTCCATCTCTAAACAAACTCAAATTCCTCAACATCTCAAACAACAACTTCAAATCTTCAATTTCCTTAAACAACTTCATCAAGAAATTTGGAAAATCATCATTCATTCACAACAACTTCAATCTCAACAACTACAATACATCCAAAAAACCAAACATTCATTCAAATTCAATTTCAACTCTACAACACCACCACCAACATCAACAACAACTTCATGTGACAAACACAAAACCCATTCACACGAACAAAACCAAACCAAGACACAAACAGAAGTCAAAAACAAAAACAGTGATTATTGTAGCAGTTTCCTCGGCGTCAACGCTTATTTTTGTCGTATTATGTCTATGTGCAATTTTTGGTTACAGAAGAAAAAGAAAACTAGCTCAAAAAAACAAATGGGCAATTTCAATATCAAAACCAATGACAGGATTAACAACAACCGTTAAGATGGAGAAATCTGGACCGTTTGCATTTGAAACAGAATCTGGAACATCATGGGTAGCTGATCTAAAAGAACCAACTTCAGCATCAGTTGTGATGTTTGAGAAACCTTTGATGAACATTAGTTTCATGGATCTTATGAATGCCACGTCATACTTTGGGAAAGATTCTCAGCTAGCTGAAGGTAGGTGTGGGCCCGTTTATCGTGCTGTTTTGCCTGGGGAGTTACACGTGGCAATTAAGGTTCTTGAAAATGCTAGAGATGTTGATCATGATGATGCTGTTGATACTTTTGTTGACTTGTCTAAGCTTAAACATCCTAATCTCTTGCCTCTCTCTGGTTACTGCATCGCAGGGAAAGAAAAGCTAGTGTTGTATGAGTTTATGTCAAACGGGGATTTAGGCAGATGGCTGCACGAGCTACCGACGGGTGAGACTAATGTGGAGGACTGGAGTAGCGACACATGGGAGATTCAAAACGGTGTTGGTTCAAGAGCCTCGTCACCGGAAAAAATGGGTTGGCCAACACGACACCGTATCGCTCTAGGGGTAGCACGTGGTCTAGCTTTTCTCCACCACGCAGGATCGAAGCCCGTCATTCACGGCCATCTGGTGACATCAAATGTCCTACTCGCTGATGACTTCGAGCCTCGAATAGCCGATTTTGGGTTCCGAAAGTTTGGACAACAATGTCCTCCTAATTGTAGCACCGAAACGGATGTTTATTGCTTCGGTGTGGTTCTTATGGAGCTTCTAACGGGGAGGTCCGGTACGGCTGAGACAGTTGTTTGGGTGAGGAAGCTTGTAAGAGAGAGTCATGGAGTGAGAGCGCTCGACGATAGGCTCAAACTCGGTGGCGGTGACTCTGAGAGTCAGATGGTGGAGAGTCTTCGAGTTGCGTACCTATGTACGGCCGAGTCGCCTGGGAAGAGGCCCACTATGCAGCAAGTTTTGGGCCTTCTCAAAGATATTCATCCGAGAGCTGGACTCGAATGA 2109 0.4011 MKQFYRFLILLSLFTFTQSSSCNSENKNLISKAFQSVQGFNTSLFQTKSFNCSKGQINIIELPSKNLSGNISWRYLRNMTNLEFLDLSGNSLQGQVPNWFWSSSSNLSTVNLSNNRFGGSIAFKTKPISQNGSFFTSSLQNLNLSHNRFTNQLHLSFFENLKILDLSHNNLNTLPSGFQNLTKLNYLDLSNCNIIGNIKPISYLKSLSFLNLSNNSLNGTFTSDFPSLNKLKFLNISNNNFKSSISLNNFIKKFGKSSFIHNNFNLNNYNTSKKPNIHSNSISTLQHHHQHQQQLHVTNTKPIHTNKTKPRHKQKSKTKTVIIVAVSSASTLIFVVLCLCAIFGYRRKRKLAQKNKWAISISKPMTGLTTTVKMEKSGPFAFETESGTSWVADLKEPTSASVVMFEKPLMNISFMDLMNATSYFGKDSQLAEGRCGPVYRAVLPGELHVAIKVLENARDVDHDDAVDTFVDLSKLKHPNLLPLSGYCIAGKEKLVLYEFMSNGDLGRWLHELPTGETNVEDWSSDTWEIQNGVGSRASSPEKMGWPTRHRIALGVARGLAFLHHAGSKPVIHGHLVTSNVLLADDFEPRIADFGFRKFGQQCPPNCSTETDVYCFGVVLMELLTGRSGTAETVVWVRKLVRESHGVRALDDRLKLGGGDSESQMVESLRVAYLCTAESPGKRPTMQQVLGLLKDIHPRAGLE* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4493 702 SMART LRR_typ_2 158 180 IPR003591 -
Mal4g4493 702 SMART LRR_typ_2 79 102 IPR003591 -
Mal4g4493 702 SMART LRR_typ_2 204 223 IPR003591 -
Mal4g4493 702 Gene3D Ribonuclease Inhibitor 13 132 IPR032675 -
Mal4g4493 702 SUPERFAMILY L domain-like 47 266 - -
Mal4g4493 702 Pfam Leucine rich repeat 138 194 IPR001611 GO:0005515
Mal4g4493 702 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 3 701 - -
Mal4g4493 702 Gene3D Transferase(Phosphotransferase) domain 1 603 700 - -
Mal4g4493 702 ProSiteProfiles Leucine-rich repeat profile. 160 182 IPR001611 GO:0005515
Mal4g4493 702 PANTHER KINASE, PUTATIVE-RELATED 3 701 - -
Mal4g4493 702 Gene3D Phosphorylase Kinase; domain 1 384 499 - -
Mal4g4493 702 Pfam Protein tyrosine and serine/threonine kinase 427 597 IPR001245 GO:0004672|GO:0006468
Mal4g4493 702 ProSiteProfiles Leucine-rich repeat profile. 183 205 IPR001611 GO:0005515
Mal4g4493 702 ProSiteProfiles Leucine-rich repeat profile. 138 159 IPR001611 GO:0005515
Mal4g4493 702 ProSiteProfiles Protein kinase domain profile. 424 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g4493 702 SUPERFAMILY Protein kinase-like (PK-like) 402 692 IPR011009 -
Mal4g4493 702 Gene3D Ribonuclease Inhibitor 136 275 IPR032675 -
Mal4g4493 702 Gene3D Transferase(Phosphotransferase) domain 1 500 602 - -
Mal4g4493 702 PRINTS Leucine-rich repeat signature 161 174 - -
Mal4g4493 702 PRINTS Leucine-rich repeat signature 204 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4493 Mal-Chr4 123272086 123275353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4493 59 695 Receptor kinase-like Gene Family AT5G07280 30.133 1.26e-66 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Mal4g4493 PK_Tyr_Ser-Thr 9.3e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4493 - - gmx:100778920 927.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g4493 4 123272086 123275353 Mal4g4493 4 123272086 123275353 ECH
Mal7g4347 7 110721278 110723730 Mal4g4493 4 123272086 123275353 PCT