Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4489 ATGGAAAGTGTTAAAGTGTTTGTTTGGCTTGTTTCCTTTATTTTTCTGTTGAATTTGGTGGCAATGGTTGTTGAGGGAGCTGAGAGCCTTCTCTCTCCAAAGGGTGTCAACTATGAAGTGGCTGCTTTGATGTCTATGAAGAATAAGATGAATGATGGGTTGCATGTTATGAATGGTTGGGATATTAATTCGGTTGATCCTTGTACTTGGAATATGGTTGCTTGCTCTTCTGAGGGTTATGTCATTTCCTTGGAAATGGCCAGTGCAGGTTTATCTGGAATAATTTCCTCAGGAATTGGAAATTTGAGCCACCTCCGAACATTGTTTTTGCAGAACAATCAGTTATCTGGTCCTATCCCGGATGAGATAGGAAACCTGTTAGAGCTTCAGACTCTTGATCTTTCCGGTAACCAGCTTATTGGGAACATTCCTAGTTCTTTGGGCTCTTTGACTCATCTTAGTTACTTGCGGCTCAGCAAAAATAAACTATCTGGACAGATCCCTCAACTTGTTGCTAATCTCACAGGACTTTCATTCTTGGATTTGTCATTCAACAATCTTAGTGGTCCCACTCCGAAAATTTTAGCAAAAGGCTATAGTATTTCAGGAAACAACTTCCTCTGTACATCATCCTCAGAAATTTGTATGGGAGGTTCGAAGCCAGTAAATGATACAAGGTCATCTAAGCCAGTCAGCAGTCATCGCCATGTGGTGCTTTCTGTTGTTATTGGCTTTAGTTGCGCATTTGTAATTTCAGTGATGCTACTCATCTATTGGTTGCATTGGTACAAATCACGCATCCTCTATTCATCTTATGTGGAGCAAGATTGTGAATTTGGTATTGGTCATTTGAAGAGGTTCTCCTTCCGTGAATTGCAAATTGCTACTGGAAATTTCACTTCAAAAAATATCGTAGGACAAGGTGGTTTTGGTGTTGTATACAAAGGATGCCTTGCAAACAAAATGTTGGTGGCAGTAAAGAGGCTTAAAGATCCTAATTATACTGGAGAAGTGCAGTTTCAAACCGAAGTCGAGATGATTGGCTTGGCTGTACATCGTAACCTCTTGCGTCTTTATGGATTTTGTATGACACCAGATGAAAGGTTACTCATTTATCCATTCATGCCTAATGGCAGTGTTGCTGATCGCTTACGAGAGAGTTTCCGGGGAAAGCCATGTTTGGATTGGGACAGACGAATGCGCATTGCCGTTGGGGCTGCACGTGGGCTTCTATATTTGCACGAACAATGCAATCCAAAAATAATCCACAGGGATGTTAAGGCTGCAAACATTTTGTTAGATGAAAGTTTTGAAGCTGTGGTAGGAGATTTTGGTCTTGCTAAGCTCTTAGATCAAAGGGATTCACATGTAACTACTGCAGTACGCGGGACTGTAGGACACATTGCCCCCGAGTATCTTTCAACTGGACAGTCTTCTGAAAAAACAGATGTTTTTGGATTTGGCATATTACTTTTGGAGCTCATAACAGGACAAAAAGCACTGGATGCTGGAAATGTTCAGGTCCAAAAGGGAATGATTCTTGATTGGGCTAGAACTTTATTTGAAGAGAAGCGGCTGGAAGTGTTAGTTGACAGGGATCTAAAGGGATGTTATGATCCGGTAGAGTTAGAAAAAGCGGTCGAGTTGTCTTTGCAATGTACTCAATCTCTTCCTAGTTTGAGGCCAAAGATGTCAGAAGTTTTGAAGATTCTTGAAGGTCTTATTGGATTGTCAGTGAGGCCAGATGAATCACAAGGAGGGGGTAACCTATATGATGAAAGGAATTGCAGTTTCTCTCAAAATTATAGTGATGTTCATGAAGAACCTTCCTTTATTATTGAAGCCATTGAACTTTCTGGACCTAGGTGA 1869 0.4093 MESVKVFVWLVSFIFLLNLVAMVVEGAESLLSPKGVNYEVAALMSMKNKMNDGLHVMNGWDINSVDPCTWNMVACSSEGYVISLEMASAGLSGIISSGIGNLSHLRTLFLQNNQLSGPIPDEIGNLLELQTLDLSGNQLIGNIPSSLGSLTHLSYLRLSKNKLSGQIPQLVANLTGLSFLDLSFNNLSGPTPKILAKGYSISGNNFLCTSSSEICMGGSKPVNDTRSSKPVSSHRHVVLSVVIGFSCAFVISVMLLIYWLHWYKSRILYSSYVEQDCEFGIGHLKRFSFRELQIATGNFTSKNIVGQGGFGVVYKGCLANKMLVAVKRLKDPNYTGEVQFQTEVEMIGLAVHRNLLRLYGFCMTPDERLLIYPFMPNGSVADRLRESFRGKPCLDWDRRMRIAVGAARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDQRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQKALDAGNVQVQKGMILDWARTLFEEKRLEVLVDRDLKGCYDPVELEKAVELSLQCTQSLPSLRPKMSEVLKILEGLIGLSVRPDESQGGGNLYDERNCSFSQNYSDVHEEPSFIIEAIELSGPR* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4489 622 ProSitePatterns Serine/Threonine protein kinases active-site signature. 421 433 IPR008271 GO:0004672|GO:0006468
Mal4g4489 622 SMART LRR_typ_2 126 150 IPR003591 -
Mal4g4489 622 SMART LRR_typ_2 102 125 IPR003591 -
Mal4g4489 622 SMART LRR_typ_2 174 197 IPR003591 -
Mal4g4489 622 Gene3D Phosphorylase Kinase; domain 1 269 374 - -
Mal4g4489 622 Gene3D Ribonuclease Inhibitor 36 216 IPR032675 -
Mal4g4489 622 Pfam Leucine rich repeat N-terminal domain 37 76 IPR013210 -
Mal4g4489 622 SUPERFAMILY Protein kinase-like (PK-like) 282 572 IPR011009 -
Mal4g4489 622 ProSiteProfiles Protein kinase domain profile. 299 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g4489 622 Gene3D Transferase(Phosphotransferase) domain 1 375 575 - -
Mal4g4489 622 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 11 622 - -
Mal4g4489 622 ProSiteProfiles Leucine-rich repeat profile. 128 150 IPR001611 GO:0005515
Mal4g4489 622 Pfam Protein kinase domain 300 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g4489 622 SUPERFAMILY L domain-like 38 208 - -
Mal4g4489 622 ProSitePatterns Protein kinases ATP-binding region signature. 305 327 IPR017441 GO:0005524
Mal4g4489 622 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 11 622 - -
Mal4g4489 622 SMART serkin_6 299 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4489 Mal-Chr4 123236643 123240648 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4489 44 622 Receptor kinase-like Gene Family AT5G45780 70.052 0.0 813
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Mal4g4489 Pkinase 1.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4489 - - gmx:100810610 1081.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g4489 4 123236643 123240648 Mal4g4489 4 123236643 123240648 ECH