Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4482 ATGACCAAACTATGCTCTCATCTCATTTTTCTCTCACTCTCACTGAATTACTACATCTTCACTTGCTTAGCTATGAATAGAAAAAACATCACCACAGATGAATTTTCACTTCTTGCATTCAAATCTTCCATTACTCTAGACCCTTATGATCTAATGGTTCATAACTGGTCAACCTCCTCTTATGTATGCAATTGGGTTGGTGTAACATGTGATGAACAACATGGTAGAGTCCATGCTTTGAATCTTAGTAACATGGGACTTCAAGGTACTATTTCCCCACAACTTGGGAATCTCTCGTTCCTTGTTTACCTTGATCTTCAAGGCAATGCTTTCAATGGTGAATTGCCACAATCGTTATTTCAGTTGCATCGATTGAAGTTGCTTAATTTGAGCAATAACATGCTTTCTGGAACCATACCTCAAACAATTTCCAACTTGTTTTCACTTGAAGAAATTAATTTAGCTAATAACTCCTTATCAGGGGAAATTCCAAAAAGGATGGGCAATCTTACTCAGCTGATAACAATGAACTTTGGTTATAATGATCTATCCGGCAATCTTCCATCAAATATTTGCAAAGGGCTTCCAAAACTTAGAATACTTAATATTTCTCATAATCATTTTTCTGGTGACATGCCTACTGTTTGGCATCAATGTGAAAATTTGGAAAGGTTAATATTATCCTACAATGGTTTCAACAAAGGACCAATGCCAGAAGATATGGGAAACTTGAACAAGCTTCAACGTTTATTTCTTAGTAGTAACAACTTGGAGGGTGGAATTCCATTCTCTCTATTCAACATTACTACTCTGAAGATTGTTAACATTAGTGGTAACAATTTACATGGAATTCTACCAAGTGAGCTTTGTCATCCACTTCTTCCTCAACTTGAAAGATTTATTTTGGACAGTAATCAATTTGAAGGAAGAATTCCACGTTCCATTGGAAACTGCACATCGTTGAAATATTTGAGTTTGAACGATAATCATTTCACTGGTTTGGCACCCGAGGAGATTGGCAATCTTGATCAACTTGAGACTCTATTATTGGGAAACAATAGATTGAGTGGACCCATTTCTTCAAAAATCTTCAACATTTCAACATTGAGGTACTTGTCTCTCATAAACAATTCTCTCTCAGGCAGTCTTCCAACAGACCTAGGGCGTGGTTGTCCTAATCTGGAAAAGCTAAAAATACGTTATAACATGTTTGTGGGAAACATTCCAAATGGTATAGCCAATGCTTCTATGCTCACTGAAATAGACTTGCAGAAAAATCAATTCAGTGGAACAGTACCTGATGTTTTTGGTGGTTTAGCATTCCTTGAATGTCTCCATTTAGATTTCAATAATAATTTGAAACTAGAGGATTCCTTTGGATTCAACTTCCTCACTTCATTGACAGGTTGTACAAGTTTGAAATATTTGTCTGTATCAGGAACTAGTTTATCCAAACTTCCCAAGTCAATTGGAAACTTAACTGTAGGATACTTTTGGGCACAATCTTCTGGAATTGGTGGCAATTTGCCATTGGAAATAGGAAACATGAGCGACCTGGTTCAATTATATTTGAGTGGGAATGATTTAAATGGACCAATCCCTAGTAATATTAAAGGGCTACATAACCTTCAAACTTTGTATCTTGAGGACAATGGACTCCAAGGATCCATTCAGGAGCTTTGTGAAATTAAGAGTTTGAGTGATTTGTATCTATCAAACAATAAGTTTTCTGGAGTGTTGCCAACATGCTTAGGAAATATGACTTCTCTTAGCAAAGTTCACTTAGGATCTAATAGGTTGACTTCTGAGATACCTTCCTCATTTTGGAGTCTCAAAGATATTTTAGAGGTAAACTTATCCTCCAATGCTTTAATAGGAAATATTTCAATGGAGATTGGTAAATTGAGAGCAATTACGCTATTAAATTTGTCGGGAAATCAGATTTCAAGCAACATTCCTGAAACTTTAGGTTTATTAAAAACTTTGAGCTTCTTGGACTTGTCCCATAATCTTCTTACTGGTGTCATTCCAAAATCCTTAGAAAACCTTGTCAGTCTTGAAAGTATCAACTTTTCATACAATATGTTACAAGGAGAGATTCCTGATGGAGGACGATTCAAAAATTTCACAGCTCAATCTTTCATGCATAATGAAGCACTTTGCGGTAATCCTCTCCTACAAGTACCTCCATGTGGTAAACATAGAAGGTCAATCGCAAAGACACTATTAATCAAATGCATGCTGCCCATAATTGTGTCGGCCATTTTAGTTGCTGGATGCATTATACTTGTACTACACAAAAGGAAAAAAGTTGAAAATCGACATAAAAGCGATTTATCAACTATAGGAGTTCCAAGAAGGATTTCCTATTATGAACTTGTGCAAGCAACTAGTGGATTCAGTGAGAGTAATTTACTTGGAAAGGGAGGTTTTGGATCTGTGTATCAAGGGCTTCTCCCTAGTGGGGAGATGGTTGCAGTTAAGGTAATTGATTTAAACTTCAAAGCAACATCAAGGAGCTTTGATGTAGAATGCAACACAATGCGCAATCTACGACATCGAAATCTTGTTGAGATTATTAGCAGTTGTTCAAATGTTGATTTCAAATCTTTGGTGATGAAGTTTATGTCAAATGGAAGTGTGGAAAAATGGTTATACTCATATAACTATTGTTTAGATTTCTTGCAAAGGTTGAATATAATGATCGATGTCGCATCTGCATTGGAGTATCTCCATCATGGTTCTTCAATACCAGTGGTTCATTGCGATCTGAAACCTAGTAATGTTTTACTAGACAAAAACATGGTTGCACATGTTAGCGATTTTGGCATTGTCAAGCTCTTGGATGATGGACAGTCTAAAATTCATACCGAAACTTTAGCTACTCTTGGCTATATAGCACCTGAGTATGGTTCTAAGGGCATTGTTTCTATTAAAGGAGATGTGTACAGCTATGGGATTATGCTTATGGAGATATTCACAAGAAAGAGGCCAACAGATGAAATGTTTGCAGCAGAATTAACTTTGAAAACTTGGATCAGTGAATCTATGCCTAATTCAGTTATGGAAGTTGTGGATTCCAAATTAGTCCAGGAACATGAAAAAACAATTAATGACATTGTGTCTCATATATCATCTATTTTGGCTTTAAGCTTGAGTTGTTGCGCGGATTCACCTGAAGAGCGAATTAACATGATAGAAGTCACTGCATCATTAATCAAAATCAAGACCTTATTCCTTCAAGAAAAAGGATATGAAGATGTGAACTTATGTTTGTGA 3279 0.3611 MTKLCSHLIFLSLSLNYYIFTCLAMNRKNITTDEFSLLAFKSSITLDPYDLMVHNWSTSSYVCNWVGVTCDEQHGRVHALNLSNMGLQGTISPQLGNLSFLVYLDLQGNAFNGELPQSLFQLHRLKLLNLSNNMLSGTIPQTISNLFSLEEINLANNSLSGEIPKRMGNLTQLITMNFGYNDLSGNLPSNICKGLPKLRILNISHNHFSGDMPTVWHQCENLERLILSYNGFNKGPMPEDMGNLNKLQRLFLSSNNLEGGIPFSLFNITTLKIVNISGNNLHGILPSELCHPLLPQLERFILDSNQFEGRIPRSIGNCTSLKYLSLNDNHFTGLAPEEIGNLDQLETLLLGNNRLSGPISSKIFNISTLRYLSLINNSLSGSLPTDLGRGCPNLEKLKIRYNMFVGNIPNGIANASMLTEIDLQKNQFSGTVPDVFGGLAFLECLHLDFNNNLKLEDSFGFNFLTSLTGCTSLKYLSVSGTSLSKLPKSIGNLTVGYFWAQSSGIGGNLPLEIGNMSDLVQLYLSGNDLNGPIPSNIKGLHNLQTLYLEDNGLQGSIQELCEIKSLSDLYLSNNKFSGVLPTCLGNMTSLSKVHLGSNRLTSEIPSSFWSLKDILEVNLSSNALIGNISMEIGKLRAITLLNLSGNQISSNIPETLGLLKTLSFLDLSHNLLTGVIPKSLENLVSLESINFSYNMLQGEIPDGGRFKNFTAQSFMHNEALCGNPLLQVPPCGKHRRSIAKTLLIKCMLPIIVSAILVAGCIILVLHKRKKVENRHKSDLSTIGVPRRISYYELVQATSGFSESNLLGKGGFGSVYQGLLPSGEMVAVKVIDLNFKATSRSFDVECNTMRNLRHRNLVEIISSCSNVDFKSLVMKFMSNGSVEKWLYSYNYCLDFLQRLNIMIDVASALEYLHHGSSIPVVHCDLKPSNVLLDKNMVAHVSDFGIVKLLDDGQSKIHTETLATLGYIAPEYGSKGIVSIKGDVYSYGIMLMEIFTRKRPTDEMFAAELTLKTWISESMPNSVMEVVDSKLVQEHEKTINDIVSHISSILALSLSCCADSPEERINMIEVTASLIKIKTLFLQEKGYEDVNLCL* 1093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4482 1092 Gene3D Ribonuclease Inhibitor 144 223 IPR032675 -
Mal4g4482 1092 Gene3D Transferase(Phosphotransferase) domain 1 876 1086 - -
Mal4g4482 1092 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Mal4g4482 1092 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 130 233 - -
Mal4g4482 1092 SUPERFAMILY RNI-like 302 701 - -
Mal4g4482 1092 ProSitePatterns Protein kinases ATP-binding region signature. 806 828 IPR017441 GO:0005524
Mal4g4482 1092 SMART serkin_6 800 1079 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g4482 1092 Pfam Leucine Rich Repeat 662 683 IPR001611 GO:0005515
Mal4g4482 1092 Pfam Leucine Rich Repeat 124 146 IPR001611 GO:0005515
Mal4g4482 1092 ProSiteProfiles Protein kinase domain profile. 800 1080 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g4482 1092 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 130 233 - -
Mal4g4482 1092 Pfam Protein kinase domain 801 1068 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g4482 1092 SMART LRR_sd22_2 659 685 - -
Mal4g4482 1092 SMART LRR_sd22_2 342 368 - -
Mal4g4482 1092 SMART LRR_sd22_2 540 562 - -
Mal4g4482 1092 SMART LRR_sd22_2 122 148 - -
Mal4g4482 1092 SMART LRR_sd22_2 244 265 - -
Mal4g4482 1092 Gene3D Ribonuclease Inhibitor 224 454 IPR032675 -
Mal4g4482 1092 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 14 146 - -
Mal4g4482 1092 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 651 1081 - -
Mal4g4482 1092 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 294 662 - -
Mal4g4482 1092 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 651 1081 - -
Mal4g4482 1092 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 294 662 - -
Mal4g4482 1092 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 14 146 - -
Mal4g4482 1092 Gene3D Ribonuclease Inhibitor 33 143 IPR032675 -
Mal4g4482 1092 SUPERFAMILY Protein kinase-like (PK-like) 779 1072 IPR011009 -
Mal4g4482 1092 Pfam Leucine rich repeat 565 624 IPR001611 GO:0005515
Mal4g4482 1092 Pfam Leucine rich repeat 295 355 IPR001611 GO:0005515
Mal4g4482 1092 SUPERFAMILY RNI-like 79 405 - -
Mal4g4482 1092 Gene3D Ribonuclease Inhibitor 455 738 IPR032675 -
Mal4g4482 1092 Gene3D Phosphorylase Kinase; domain 1 783 875 - -
Mal4g4482 1092 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 234 333 - -
Mal4g4482 1092 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 234 333 - -
Mal4g4482 1092 ProSitePatterns Serine/Threonine protein kinases active-site signature. 919 931 IPR008271 GO:0004672|GO:0006468
Mal4g4482 1092 SMART LRR_typ_2 470 493 IPR003591 -
Mal4g4482 1092 SMART LRR_typ_2 587 611 IPR003591 -
Mal4g4482 1092 SMART LRR_typ_2 98 122 IPR003591 -
Mal4g4482 1092 SMART LRR_typ_2 635 658 IPR003591 -
Mal4g4482 1092 SMART LRR_typ_2 563 586 IPR003591 -
Mal4g4482 1092 SMART LRR_typ_2 659 682 IPR003591 -
Mal4g4482 1092 SMART LRR_typ_2 319 341 IPR003591 -
Mal4g4482 1092 SMART LRR_typ_2 342 366 IPR003591 -
Mal4g4482 1092 SMART LRR_typ_2 294 318 IPR003591 -
Mal4g4482 1092 SMART LRR_typ_2 195 218 IPR003591 -
Mal4g4482 1092 SMART LRR_typ_2 146 170 IPR003591 -
Mal4g4482 1092 SMART LRR_typ_2 244 268 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4482 Mal-Chr4 123086330 123091140 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4482 10 1076 Receptor kinase-like Gene Family AT5G46330 34.188 1.51e-170 531
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mal4g4482 Pkinase 4.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4482 - K13420 mtr:MTR_8g465340 1121.69