Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4481 ATGGCCAAACTGTACACTTGTGACTCATGTCTCTGTATTCTCTCTGTCTCACTCTATTTTTACTTCTTCACTTGCTTAGCTATGAGTACTAAAAACATCACCACCGATGAATTATCACTTCTTGCATTCAAATCCTCTATTACCTTAGACCCTTATCATATGCTTAGTAATTGGTCAATTTCCTCTTCTACTACTTCTTTCTCTTCATGTAATTGGGTTGGTGTCACCTGTGATGAACATCATGGAAGAGTTAAGGCATTGAATCTTAGTAACATGGGTCTTGAAGGTACAATTTCCCCTCAATTGGGAAATCTTTCTTTCCTAGTTGTGCTTGATCTACATGACAATAGCTTCCATGGTGAGTTACCACAAGAGTTACTTCAATTGCATAGATTGAAGTTGTTGGATTTGAGCAAAAATGATTTTGTTGGAGAAATTCCTTTAAGGATAGGGGACTTATCAAAACTCCAACATTTGGATCTTGGCTATAATAATATTGTTGGAAATATTCCTCAATCTATATCCAATTTGTCAATGTTAGAGTACTTAGATTGGAAATCAAATTTCATCAAAGGTACCATTCCACATGTTATTGGTCAACTTCGTGTGATGAGGATTTTGGATATTAGAAATAACAAACTCTCTGGAATCATACCAACAACAATTTCCAACATGTCTTCACTTGAAGAAATTCATTTAGCAAATAACTCCTTATCTGGTGAAATTCCCAAAGGAATTGGTGATCTTACACAGATGAGAACGGTGAACCTTCAACGTAATTTTCTCTCGGGCAACATATTATCGACATTAATGTTCAACAGCTCATCTTTGCAAAATTTGGCACTTGGTTTTAATAATCTAACCGGCATTCTTCCATCAAATGTTTGTCAAGGACTTCCAAATCTTAGATTACTCTATCTTTATGTTAATGATCTTTCTGGTAAGATGCCAAATGTTTGGCATTATTGCAAAGAGTTGGAAGATTTGGAACTATCCTTCAATAATTTTGACAAAGGACGTATACCAGCTGATATTGGAAACTTGCCCAAGCTTCAATCCTTGTATCTTAAAAGCAACAACTTGGAGGGTGAAATTCCATTGTCTCTCTTCAACATCTCTTCTTTGACAGAGATCAACCTTGAAGGAAATAATTTAAATGGACCTCTCCCAGACAAGATGTGTCATCAACTTCCTCAACTTGAAATATTTACTCTATACGGTAATCATTTTGAAGGAACCATTCCACAATCCATCGGCAACTGCACATTGTTACAAATATTAAATTTACAAAATAATTTTTTTACAGGTTTGATACCAATGGAGATTGGCCGTCTAAATCAACTTCAACTTCTACAACTGGGAAATAACAGTTTGAGTGGACCTATTCCTTCAAAAGTCTTCAACATTTCAACATTGGTATATTTGCATTTCGAACTTAATTCTTTTGGAGGCATGCTTCCATCAAATATGGGATTTGGCCTTCCTAACCTGCAAGAATTACACATGTATGGAAACAAATTTGTTGGGAAAATTCCAAATAGTATATCCAATGCTTCAAATCTCGTCATAATTGACTTGAGTTCAAATGAATTTAGTGGAATCATACCCAACTCATTTGGAGATTTAAGATTCCTCGAATCACTCATCATAGGTGGCAATAATTTGACAACAGATGATTCTCTTGAATTCAACTTCCTAACTTCACTAACAAGTTGTAGATATTTGACATATCTTGATGTATCAGAGATGATCAACTTACAATTAAAACTTCCCAAGTCCATAGGAAACTTAACTTTAGAACATTTTTGGGCAAATTCTTGTGGAATTAATGGAAATATTCCACTAGAAATCGGAAACATGAGCAACCTGATTCGATTATCTCTGAGTAGGAATTATTTAAAAGGATCAATCCCTAGTACAATTAAAGGGTTACATAATCTTCAATCTTTGGATCTTGACTACAATGGACTACAAGGATCTATCAATGGCGAGCTTTGTGAAATTAGGAGTTTGAGCGAGTTGAACTTAACAAGCAATAAGCTTATAGGAGTGTTACCAACATGTTTGGGAAATATGACTTCTCTTAGAAAGTTTCACATAGGATCTAATAGGTTAACCTCTAAGATACCTTCCTCATTTTGGAGTCTCAATGATATTTTAGAGGTAAACTTATCCTCCAATGCTTTAACTGGAATTATTCCACCTGAGATTAAGAATTTGAGAGCTATTGTACTATTAGATTTGTCAAGAAATCAAATTTCAAGCAACATTCCAGCAAGCATAAGTTTCTTGAAAACTTTAGAAACTCTCTCCTTGGCAGCTAACAAATTGAAAGGGCCTATTCCAAAATCACTTGGTGAAATGGTAGGCTTGAGTTTCTTGGACTTGTCTCAAAATCTTCTTACTGGTGTGATCCCAAAATCATTAGAGTCACTTTCTTATCTTAAATACATTAATTTTTCATACAATAGATTGCAAGGAGAGATTCCTAATGGAGGGCCATTCAAAAAATTCACATCTCAATCTTTCATGAATAATGAAGCACTTTGTGGTAGTCCTCACTTACAAGTACCTCCATGTGATAAACAAATTAGAAAAAAATCAAAGAAAAAGATGTTATTAATCGTATGCATATCATCCATAATTGCCGTGTTTGGCATTTTGGCTATTGCATGCATAATACTTCAAATGCTTAAAAAGAAAAAGGTTGAAAATCCATTTGAAAGGGAGTTATCAACTAATTTAGGGCTTTCAAAAAGGATTTCCTATTCTGAACTTGTTCAAGCAACTAATGGATTTAGTGAGACTAATTTAATTGGAAAGGGTGGCTTTGGATCTGTGTATCAAGGAATGATTTCTAGTGGGAAGATGGTAGCAATTAAAGTACTTGACTTGAAATCGGAAGCAACATCAAAAAGCTTTAATGCAGAATGCAATGCTATGCGCAATCTTCGGCATCGAAATCTTGTTGAGATTATTACTAGTTGTTCAAATGTCAATTTCAGATCATTGGTAATGGAGTTAATGTCAAATGGAAGCTTAGAAAAATGGGTATACACTGATAACTATTTTTTAGGTTTCTTGCAAAGGTTGAATATAATGATAGACGTGGCATCAGCATTGGAGTATCTCCATCATGGTTCTTCAATACCAGTGGTTCATTGTGATTTGAAGCCTAGTAATGTGTTACTCGATGAAAATATGGTTGCACATGTTAGTGATTTTGGGATTTCCAAACTCTTGGATGATGGACAATCTAAAGCTCATACTCAGACTTTAGCTACTATTGGCTATGTTTCACCAGAGTATGCATCCAAGGGAGTAATTTCAGTTAAAGGAGATGTGTACAGCTATGGAATAATGTTATTGGAAATTTACACTGGAAAAAAGCCAACAAATGAAATGTTTGGAGAAGAATTAACTTTGAAAACTTGGATTAGTGAATCAATGCACAATTCAGTTATGGAAGTTGTGGACACCAATTTAATCTCACAGCATGGGAAAGAAATTCATGAACTTTTACCTCATGTATCATCTATTTTTGCTTTAGCATTGAGTTGTTGTGAAGAATTACCTGAGGCACGAGTTAATATGATAGAGGTAACTGCATCATTAATCAAAATCAAGACCTTATTCACCCAATGA 3645 0.3462 MAKLYTCDSCLCILSVSLYFYFFTCLAMSTKNITTDELSLLAFKSSITLDPYHMLSNWSISSSTTSFSSCNWVGVTCDEHHGRVKALNLSNMGLEGTISPQLGNLSFLVVLDLHDNSFHGELPQELLQLHRLKLLDLSKNDFVGEIPLRIGDLSKLQHLDLGYNNIVGNIPQSISNLSMLEYLDWKSNFIKGTIPHVIGQLRVMRILDIRNNKLSGIIPTTISNMSSLEEIHLANNSLSGEIPKGIGDLTQMRTVNLQRNFLSGNILSTLMFNSSSLQNLALGFNNLTGILPSNVCQGLPNLRLLYLYVNDLSGKMPNVWHYCKELEDLELSFNNFDKGRIPADIGNLPKLQSLYLKSNNLEGEIPLSLFNISSLTEINLEGNNLNGPLPDKMCHQLPQLEIFTLYGNHFEGTIPQSIGNCTLLQILNLQNNFFTGLIPMEIGRLNQLQLLQLGNNSLSGPIPSKVFNISTLVYLHFELNSFGGMLPSNMGFGLPNLQELHMYGNKFVGKIPNSISNASNLVIIDLSSNEFSGIIPNSFGDLRFLESLIIGGNNLTTDDSLEFNFLTSLTSCRYLTYLDVSEMINLQLKLPKSIGNLTLEHFWANSCGINGNIPLEIGNMSNLIRLSLSRNYLKGSIPSTIKGLHNLQSLDLDYNGLQGSINGELCEIRSLSELNLTSNKLIGVLPTCLGNMTSLRKFHIGSNRLTSKIPSSFWSLNDILEVNLSSNALTGIIPPEIKNLRAIVLLDLSRNQISSNIPASISFLKTLETLSLAANKLKGPIPKSLGEMVGLSFLDLSQNLLTGVIPKSLESLSYLKYINFSYNRLQGEIPNGGPFKKFTSQSFMNNEALCGSPHLQVPPCDKQIRKKSKKKMLLIVCISSIIAVFGILAIACIILQMLKKKKVENPFERELSTNLGLSKRISYSELVQATNGFSETNLIGKGGFGSVYQGMISSGKMVAIKVLDLKSEATSKSFNAECNAMRNLRHRNLVEIITSCSNVNFRSLVMELMSNGSLEKWVYTDNYFLGFLQRLNIMIDVASALEYLHHGSSIPVVHCDLKPSNVLLDENMVAHVSDFGISKLLDDGQSKAHTQTLATIGYVSPEYASKGVISVKGDVYSYGIMLLEIYTGKKPTNEMFGEELTLKTWISESMHNSVMEVVDTNLISQHGKEIHELLPHVSSIFALALSCCEELPEARVNMIEVTASLIKIKTLFTQ* 1215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4481 1214 Pfam Leucine rich repeat N-terminal domain 35 78 IPR013210 -
Mal4g4481 1214 SUPERFAMILY L domain-like 63 410 - -
Mal4g4481 1214 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 399 1212 - -
Mal4g4481 1214 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 325 440 - -
Mal4g4481 1214 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 205 337 - -
Mal4g4481 1214 SMART LRR_typ_2 788 811 IPR003591 -
Mal4g4481 1214 SMART LRR_typ_2 299 322 IPR003591 -
Mal4g4481 1214 SMART LRR_typ_2 494 518 IPR003591 -
Mal4g4481 1214 SMART LRR_typ_2 620 643 IPR003591 -
Mal4g4481 1214 SMART LRR_typ_2 225 249 IPR003591 -
Mal4g4481 1214 SMART LRR_typ_2 519 541 IPR003591 -
Mal4g4481 1214 SMART LRR_typ_2 740 764 IPR003591 -
Mal4g4481 1214 SMART LRR_typ_2 105 129 IPR003591 -
Mal4g4481 1214 SMART LRR_typ_2 153 177 IPR003591 -
Mal4g4481 1214 SMART LRR_typ_2 692 716 IPR003591 -
Mal4g4481 1214 SMART LRR_typ_2 348 372 IPR003591 -
Mal4g4481 1214 SMART LRR_typ_2 644 667 IPR003591 -
Mal4g4481 1214 SMART LRR_typ_2 668 691 IPR003591 -
Mal4g4481 1214 SMART LRR_typ_2 275 298 IPR003591 -
Mal4g4481 1214 SMART LRR_typ_2 397 421 IPR003591 -
Mal4g4481 1214 SMART LRR_typ_2 201 224 IPR003591 -
Mal4g4481 1214 SMART LRR_typ_2 445 469 IPR003591 -
Mal4g4481 1214 Gene3D Ribonuclease Inhibitor 560 869 IPR032675 -
Mal4g4481 1214 Gene3D Transferase(Phosphotransferase) domain 1 1009 1213 - -
Mal4g4481 1214 SUPERFAMILY L domain-like 393 488 - -
Mal4g4481 1214 Gene3D Ribonuclease Inhibitor 294 393 IPR032675 -
Mal4g4481 1214 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 399 1212 - -
Mal4g4481 1214 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 205 337 - -
Mal4g4481 1214 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 325 440 - -
Mal4g4481 1214 SUPERFAMILY Protein kinase-like (PK-like) 915 1205 IPR011009 -
Mal4g4481 1214 ProSitePatterns Protein kinases ATP-binding region signature. 939 961 IPR017441 GO:0005524
Mal4g4481 1214 SMART LRR_sd22_2 788 814 - -
Mal4g4481 1214 SMART LRR_sd22_2 764 785 - -
Mal4g4481 1214 SMART LRR_sd22_2 644 676 - -
Mal4g4481 1214 SMART LRR_sd22_2 445 471 - -
Mal4g4481 1214 SMART LRR_sd22_2 201 227 - -
Mal4g4481 1214 SMART LRR_sd22_2 153 179 - -
Mal4g4481 1214 Gene3D Phosphorylase Kinase; domain 1 916 1008 - -
Mal4g4481 1214 SUPERFAMILY RNI-like 493 831 - -
Mal4g4481 1214 Pfam Protein kinase domain 934 1201 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g4481 1214 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 152 244 - -
Mal4g4481 1214 SMART serkin_6 933 1212 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g4481 1214 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 19 153 - -
Mal4g4481 1214 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 152 244 - -
Mal4g4481 1214 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1052 1064 IPR008271 GO:0004672|GO:0006468
Mal4g4481 1214 Pfam Leucine Rich Repeat 155 177 IPR001611 GO:0005515
Mal4g4481 1214 ProSiteProfiles Protein kinase domain profile. 933 1212 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g4481 1214 Pfam Leucine rich repeat 619 657 IPR001611 GO:0005515
Mal4g4481 1214 Pfam Leucine rich repeat 204 260 IPR001611 GO:0005515
Mal4g4481 1214 Pfam Leucine rich repeat 495 555 IPR001611 GO:0005515
Mal4g4481 1214 Pfam Leucine rich repeat 694 753 IPR001611 GO:0005515
Mal4g4481 1214 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 19 153 - -
Mal4g4481 1214 Gene3D Ribonuclease Inhibitor 394 559 IPR032675 -
Mal4g4481 1214 Gene3D Ribonuclease Inhibitor 147 204 IPR032675 -
Mal4g4481 1214 Gene3D Ribonuclease Inhibitor 205 274 IPR032675 -
Mal4g4481 1214 Gene3D Ribonuclease Inhibitor 36 146 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4481 Mal-Chr4 123070780 123082197 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4481 596 833 Receptor kinase-like Gene Family AT3G47570 32.917 5.66e-24 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mal4g4481 Pkinase 3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4481 K13420 - mtr:MTR_6g040210 1237.25