Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4476 ATGGCCAAATTATACTCTTGTCACTCTTGGCTCTGTATTCTCTCTGCTTCACTCTATTATTTCTTCTTTACTTGCTTAGCTGTGAGTAGTAAAAAAAACATCACCACCGATGAATTTTCACTTCTTGCATTCAAATCCTCAATTACCTTAGACCCTCATTATATGCTCAGTAACTGGTCAATTTCCTCTTCTACTTCTTTCTCTTCATGCACTTGGGTTGGTGTCACTTGTGATGAACATCATGGAAGAGTAAAGGCATTGAATCTTAGTAACATGGGCCTTGAAGGTACCATTTCTCCTCAATTGGGAAATCTCTCTTTCCTACTTGTTCTTGATCTACATGACAATAGTTTGCATGGTGAGTTACCACATGAGTTACTTCGGTTGAAGAGATTGAAGTTGTTGGATTTGAGCTACAATGAATTTGTTGGAGAAATTCCTTCAAGGATAGGGGAGTTATCAAAACTTCAACATTTAAATATTGACTATAATAATATTGTTGGATTTATTCCTCAATCTATATCCAACTTATCAATGTTAGAGTATCAAGGTTTGAAATCAAATCTCATCAAAGGAACCATTCCACATGCTATTGGTCAACTTCGTGTGTTGAAGATTTTGGATATTAGAAATAACAAGCTCTCTGGAATCATACCAACAACAATTTCCAACATATCTTCACTTGAACAAATTCATTTAGCAGATAACACCTTATCAGGAGAAATTCCTAAAGGAATTGGCGATCTTCCACAACTGAAAACGCTGAACCTTCAAAGGAATTTTCTATCAGGCAACATATTATCAACATTAATCTTCAACAACTCATCGTTGCAAAATTTGGCACTTGGTTCTAATAATCTGACGGGCATTCTTCCATCAAATGTTTGTCAAGGGCTTCCAAACCTTAGATTACTCTATCTTCCTGTTAATGATCTTTCTGGTGAGATGCCAACTGTTTGGCGTGATTGCAAAAAGTTGGAAGATTTGGACCTATCCTTCAATAATTTTGACAAAGGACGCATGTCAGCTGACATTGAAAAATTGACCAAGCTTCAATATTTGTATCTTAGAAAGAACGACTTGGAGGGTGAAATTCCTTTATCCCTCTTCAACATCTCTTCTTTGAAAGAGATCAACCTTGATCGAAACAATTTATATGGAAGCCTCCCTGGCGAAATGTTTCATCAACTTCCTCAACTTGAAATATTTTCTCTATCCGCTAATCATTTTGAAGGAGCCATTCCACGATCCATTGGCAACTGCACATCGTTACAAGAGTTATATTTACAGAGTAACTTTTTTACAGGTACAATACCAATGGAGATTGGCCATCTTAGTCAACTTCAGGTTCTAGTAATGGGTAATAACAGCTTGAGTGAGCCTATTCCTTCAAAAGTCTTCAACATTTCAACATTGGAATTTTTGTATCTTGAACGAAATTCTTTCTCAGGAATGCTTCCATCAAATTTGGGATTTGGTTTTCCTAACCTACAAAATCTATACATGTTTGGAAACAAATTTGTTGGAAAAATTCCAAATAGTATATCCAATGCTTCAAATCTCGTCATATTTGACTTGAGTCAGAATGAATTTAGTGGAATTATGGCCAATTCTTTTGGAGATTTAAGATTCCTCAAAGTTCTGATGATAAATGGCAATAATCTGACATTAACAAATGATTCTCATGAATTCAACTTCCTTACTTCACTTACAAGTTGCCAATATCTGACATATCTTAATGTATCAGAGAATCTTTTGCTATCAAAACTTCCCAAGTCCATTGGAAACTTATCTGCAAAATACATTCTGGCAGATTCTTGTGGAATTAATGGAAATATTCCACTAGAAATCGGAAACATGAGCAACCTAATTGAATTATCTCTGAGTTGGAATAGTTTAAGTGGATCAATCCCAAGTACAATTAAAGGGTTACCTAAACTCCAGTCTTTGAATCTTGGTTACAACGGACTGCAGGGATGCATCATTGATGAGCTTTGTGAAATTAGGAGTTTGAGTGAGTTGATTTTAACAAACAATAAGCTTATAGGAGTGTTACCAACGTGTTTGGGAAATATGACTTCACTTAGAAAGTTTTACATAGGATCTAATAGGTTAACCACTGAGATACCTTCCTCATTTTGGACTCTCAATGATATTTTAGAGGTAAACATATCCTCCAATTCCTTAACTGGAAATCTTCCAATGGAGATTAGTAAATTAAGAGCAATTATGCTATTAGATCTGTCAGGCAATCAAATTTCAAGCAACATTCCTGAAACCATAGGTTTGTTAACAACTTTGCAGACTCTTTCCTTAGCACGGAACGATTTAAATGGAGTAATTCCCACATCACTTGGTGAACTGTTAAGCTTGAGCTTCTTAGACTTATCACAAAATCTTATAACTGGTGTGATCCCAAAATCCTTAGAGTCTCTTTCTTATCTTAAAGACATAAATTTGTCATACAATAAATTGCAAGGAGAGATTCCTGATGGAGGACCTTTCAAAAGATTCACAGCTCAATCTTTCATGCATAATGAAGCACTTTGTGGCAGTCCTCGCTTACAACTACCTCAATGTGATCAACATAGGAAAAAGTCAAAGATGCTATTAACCATATGCATATCATCCATAATTGTTGTGTTAGGCATTTTGGTTGTTGCATGCATTATACTTCGAATGTATAAAAGGAAAAAGGTTGAAAATCCACTTGAAAGGGATTTATCCACTATTGGAATTCCAAGAAGGATTTCCTATTATGAACTTGTGCAAGCAACTAATGGATTCAGTGACCGTAATTTACTTGGAAGGGGTGGCTTTGGATCTGTGTATCAAGGAATGCTTTCTAGTGGGAAGATGATAGCAATTAAAGTACTTGACTTGACATTGGAAGCAACATCGAGAAGCTTTGATGCAGAATGCAATGCAATGCGCAACCTTAGGCATCGAAATCTCGTTCAAATTATTAGTAGTTGTTCAAATCCTGATTTCAAATCTCTAGTGATGGAGTTCATGTCAAATGGAAGTGTGGAAGAATGGTTATACTCGGATAACTATTTTTTAGGTTTCTTGCAAAGGTTGAATATAATGATAGATGTGGCTTCTGCGTTGGAGTATCTCCATCATGGTTCTTCAATACCAGTGGTTCATTGTGATTTGAAGCCTAGTAATGTGTTACTGGATGAAGATATGGTTGCACATGTTAGTGATTTTGGCATTTCCAAGCTCTTGGATGAAGGACATTCAAAAACTCATACCGAGACTTTAGCTACTCTTGGCTATGTTGCACCAGAGTATGGATCTAAGGGAGTAATTTCAGTTAAAGGAGATGTGTACAGCTATGGGATAATGCTAATGGAAATGTTCACTAGAAAGAAGCCAACAAATGAAATGTTTTCAGATGAACGAACCTTGAAAACTTGGATTAGTGAATCAATGGCTAGTTCAATTATGGAGGTTGTGGATCACAATTTAGTCTCACAACATGAGAAAGAAATTCATGATATTTTAGCTTTAGCATTGAGATGTTGTGAAGACTCACCTGAAGCAAGAATTAATATGACAAATGTGACTGCATCGTTAATCAAGATCAAGACCTCATTCATCCGGTGA 3612 0.3591 MAKLYSCHSWLCILSASLYYFFFTCLAVSSKKNITTDEFSLLAFKSSITLDPHYMLSNWSISSSTSFSSCTWVGVTCDEHHGRVKALNLSNMGLEGTISPQLGNLSFLLVLDLHDNSLHGELPHELLRLKRLKLLDLSYNEFVGEIPSRIGELSKLQHLNIDYNNIVGFIPQSISNLSMLEYQGLKSNLIKGTIPHAIGQLRVLKILDIRNNKLSGIIPTTISNISSLEQIHLADNTLSGEIPKGIGDLPQLKTLNLQRNFLSGNILSTLIFNNSSLQNLALGSNNLTGILPSNVCQGLPNLRLLYLPVNDLSGEMPTVWRDCKKLEDLDLSFNNFDKGRMSADIEKLTKLQYLYLRKNDLEGEIPLSLFNISSLKEINLDRNNLYGSLPGEMFHQLPQLEIFSLSANHFEGAIPRSIGNCTSLQELYLQSNFFTGTIPMEIGHLSQLQVLVMGNNSLSEPIPSKVFNISTLEFLYLERNSFSGMLPSNLGFGFPNLQNLYMFGNKFVGKIPNSISNASNLVIFDLSQNEFSGIMANSFGDLRFLKVLMINGNNLTLTNDSHEFNFLTSLTSCQYLTYLNVSENLLLSKLPKSIGNLSAKYILADSCGINGNIPLEIGNMSNLIELSLSWNSLSGSIPSTIKGLPKLQSLNLGYNGLQGCIIDELCEIRSLSELILTNNKLIGVLPTCLGNMTSLRKFYIGSNRLTTEIPSSFWTLNDILEVNISSNSLTGNLPMEISKLRAIMLLDLSGNQISSNIPETIGLLTTLQTLSLARNDLNGVIPTSLGELLSLSFLDLSQNLITGVIPKSLESLSYLKDINLSYNKLQGEIPDGGPFKRFTAQSFMHNEALCGSPRLQLPQCDQHRKKSKMLLTICISSIIVVLGILVVACIILRMYKRKKVENPLERDLSTIGIPRRISYYELVQATNGFSDRNLLGRGGFGSVYQGMLSSGKMIAIKVLDLTLEATSRSFDAECNAMRNLRHRNLVQIISSCSNPDFKSLVMEFMSNGSVEEWLYSDNYFLGFLQRLNIMIDVASALEYLHHGSSIPVVHCDLKPSNVLLDEDMVAHVSDFGISKLLDEGHSKTHTETLATLGYVAPEYGSKGVISVKGDVYSYGIMLMEMFTRKKPTNEMFSDERTLKTWISESMASSIMEVVDHNLVSQHEKEIHDILALALRCCEDSPEARINMTNVTASLIKIKTSFIR* 1204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4476 1203 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 398 1202 - -
Mal4g4476 1203 Pfam Leucine Rich Repeat 622 644 IPR001611 GO:0005515
Mal4g4476 1203 Pfam Leucine Rich Repeat 155 177 IPR001611 GO:0005515
Mal4g4476 1203 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 398 1202 - -
Mal4g4476 1203 Coils Coil 1202 1203 - -
Mal4g4476 1203 SUPERFAMILY Protein kinase-like (PK-like) 909 1194 IPR011009 -
Mal4g4476 1203 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 152 295 - -
Mal4g4476 1203 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 298 438 - -
Mal4g4476 1203 SUPERFAMILY L domain-like 323 591 - -
Mal4g4476 1203 Pfam Leucine rich repeat N-terminal domain 36 78 IPR013210 -
Mal4g4476 1203 ProSitePatterns Protein kinases ATP-binding region signature. 935 957 IPR017441 GO:0005524
Mal4g4476 1203 Pfam Protein kinase domain 931 1191 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g4476 1203 Gene3D Ribonuclease Inhibitor 393 491 IPR032675 -
Mal4g4476 1203 Gene3D Ribonuclease Inhibitor 189 296 IPR032675 -
Mal4g4476 1203 Gene3D Ribonuclease Inhibitor 492 593 IPR032675 -
Mal4g4476 1203 SMART LRR_sd22_2 788 814 - -
Mal4g4476 1203 SMART LRR_sd22_2 201 227 - -
Mal4g4476 1203 SMART LRR_sd22_2 348 369 - -
Mal4g4476 1203 SMART LRR_sd22_2 299 331 - -
Mal4g4476 1203 SMART LRR_sd22_2 445 471 - -
Mal4g4476 1203 SMART LRR_sd22_2 153 179 - -
Mal4g4476 1203 SMART LRR_sd22_2 620 646 - -
Mal4g4476 1203 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 204 337 - -
Mal4g4476 1203 Gene3D Ribonuclease Inhibitor 598 864 IPR032675 -
Mal4g4476 1203 Gene3D Transferase(Phosphotransferase) domain 1 1005 1201 - -
Mal4g4476 1203 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 152 295 - -
Mal4g4476 1203 SMART LRR_typ_2 668 691 IPR003591 -
Mal4g4476 1203 SMART LRR_typ_2 445 469 IPR003591 -
Mal4g4476 1203 SMART LRR_typ_2 275 298 IPR003591 -
Mal4g4476 1203 SMART LRR_typ_2 201 224 IPR003591 -
Mal4g4476 1203 SMART LRR_typ_2 153 177 IPR003591 -
Mal4g4476 1203 SMART LRR_typ_2 348 372 IPR003591 -
Mal4g4476 1203 SMART LRR_typ_2 788 811 IPR003591 -
Mal4g4476 1203 SMART LRR_typ_2 620 643 IPR003591 -
Mal4g4476 1203 SMART LRR_typ_2 373 396 IPR003591 -
Mal4g4476 1203 SMART LRR_typ_2 740 764 IPR003591 -
Mal4g4476 1203 SMART LRR_typ_2 519 541 IPR003591 -
Mal4g4476 1203 SMART LRR_typ_2 105 129 IPR003591 -
Mal4g4476 1203 SMART LRR_typ_2 249 274 IPR003591 -
Mal4g4476 1203 SMART LRR_typ_2 692 716 IPR003591 -
Mal4g4476 1203 SMART LRR_typ_2 397 421 IPR003591 -
Mal4g4476 1203 Pfam Leucine rich repeat 374 432 IPR001611 GO:0005515
Mal4g4476 1203 Pfam Leucine rich repeat 204 260 IPR001611 GO:0005515
Mal4g4476 1203 Pfam Leucine rich repeat 669 729 IPR001611 GO:0005515
Mal4g4476 1203 Pfam Leucine rich repeat 766 825 IPR001611 GO:0005515
Mal4g4476 1203 SUPERFAMILY L domain-like 605 854 - -
Mal4g4476 1203 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 298 438 - -
Mal4g4476 1203 Gene3D Phosphorylase Kinase; domain 1 912 1004 - -
Mal4g4476 1203 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 17 154 - -
Mal4g4476 1203 Gene3D Ribonuclease Inhibitor 297 392 IPR032675 -
Mal4g4476 1203 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 17 154 - -
Mal4g4476 1203 ProSiteProfiles Protein kinase domain profile. 929 1202 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g4476 1203 SMART serkin_6 929 1201 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g4476 1203 SUPERFAMILY L domain-like 49 388 - -
Mal4g4476 1203 Gene3D Ribonuclease Inhibitor 33 188 IPR032675 -
Mal4g4476 1203 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1048 1060 IPR008271 GO:0004672|GO:0006468
Mal4g4476 1203 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 204 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4476 Mal-Chr4 122930006 122955084 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4476 687 830 Receptor kinase-like Gene Family AT3G47570 31.250 5.51e-11 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mal4g4476 Pkinase 6.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4476 - K13420 mtr:MTR_6g040210 1279.23