Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4472 ATGTGTCTTCAACTTCCTCAAATTGAAATATTTTCTCTATCCGCTAATCATTTTGAAGGAGCCATTCCACGATCCATTGGCAACTGCACATCGTTACAAAAGTTATTTTTAGGGAATAACTTTTTTACAGGTTCGATACCAATGGAGATTGGCCATCTCAGTAAACTTCAGCTTCTAGCATTGGGAAATAACATATTGAGTGGGCCTATTCCTTCAAAAGGCTTCAACATTTCAACAATGGAACTTTTCCATATTGAACTAAATTCTTTCTCAGGCATGCTTCCATCAAATATAGGATTAAGCCTTCCTAACCTGCATGGATTATACATGTATGGAAACAAGTTTGTTGGAAAAATTCCAAATAGTATATCCAATGCTTTAAATCTTGTTAGAGTTGACTTGAGTGAGAATGAATTTAGTGGGATTATACCCAATTCATTTGGAGATTTAACAGTCCTCCTCGAACATCTCATCCTAAGTATTAATAATTTGACATTAATTGATGATTCTCATGAATTCAACTTCTTTACTTCACTTACAAGTTGCAGATATCTGACATATCTTGAAGTATCAGAGAATATTTTGTTATCAAAACTTCCCAAGTCCATTGGAAACTTATCTGTAAAATACTTTATGTCAGATTATTGTGGAATTAAAGGAAATATTCCACTAGAAATCGGAAACATGAGCAACATAATTCAATTATCTCTGATTAGGAATGATTTAAGTGGATCAATCCCAAGTACAATTAAAGGGTTACATAAACTCCAGTCTTTGAATCTTGGCTACAATGGACTGCAAGGATCCATCATTGATGAGCTTTGTGATATTAGGAGCTTGAGTGAGTTATATTTAACAAGCAATAAGCTTTTTGGAGTATTACCAACATGTTTAGGAAATATGACTTCTCTTAGAAAGTTTTACATAGGATCTAACAGGTTAACCTCTAGGATACCTTCCTCCTTTTGGAATCTCAAAGATATTTTAGAGGTAAACTTATCTTCTAATACTTTAATTGGAAATCTTCCACCTGAGATTAAGAATTTGAGAGCTCTTGTACTATTGGACTTGTCAAGAAATCAAATTTCAAGCAACTTTCCAACAGCCATAAGTTTCTTGACAACTTTAGAAACTTTATCCTTAGCATATAACAAATTGAATGGGCCTATTCCAACATCACTTGGTGAAATGTCACTTTCTTATCTTAAATACATAAATTTGTCATACAATAGATTTCAAGGAGAGATTCCTGATGGAGGATCATTCAAAAGATTCAAAGCTCAATCTTTCATGCATAATGAACAGGGGCGGACCCAGGGTCCTCGCTTACAAGTACCTCCATGTGATAAACAAATTAGGAAAAAATCAATGACAAAGTTGCTATTAATCAAATGCCTATTGCCCATAATTGTGTTTGCCATTTTTGTTGTTGCATGCATTATACTTCGACTGCATATAAGGGAAAGGATTGAAAGTTCACTTGAAAGAGGTTTATCCATTATAGGAGTTCCAAGACGGATTTCCTATTATGAACTCGTGCAAGCAACTAATGGTTTCAGTGAGAGTAATTTACTTGGAAGGGGTGGCTTTGGATCTGTGTATAAAGGAATGCTTTCTAGTGGGAAGATAATAGCAATTAAAGTACTTGACTTGACTTTGGAAGCAACATCGAGAAGCTTTGATGCAGAATGCAATGCAATGCGCAACCTTAGGCATCGAAATCTCGTTCAAATTATCAGTAGTTGTTCAAATCCTGATTTCAAATCTCTAGTGATGGAATTCATGACAAATGGAAGTGTGGAAAAATGGTTATACTCGGATAACTATTGTTTGGATTTCTTGCAAAGGTTGAATATAATGATAGATGTGGCATCAGCATTGGAGTATCTCCATCATGGTTCTTCAATACCAGTGGTTCATTGTGATTTGAAGCCTAGTAATGTGTTACTGGATGAAGATATGGTTGCACATGTTAGTGATTTTGGCATTTCCAAGCTCTTGGATGAAGGACATTCAAAAACTCATACCGAGACTTTAGCTACTCTTGGCTATGTTGCACCAGGAGTAATTTCTGTTAAAGGAGATGTGTACAGCTATGGGATAATGCTAATGGAAATGTTTACAGGAAAGAAGCCAACAGATGAAATGTTTTCAGAAGAATTAACCTTGAAAACTTGTGTTAGTGAATCAATGGCCAATTCTAATATGGAAGTTGTGGATTACAATTTAGACTCACAACATGGGAAAGAAATTCATGATATCTTAGCTTTAGCATTGAGATGTTGTGAAGATTCACCTGAGGCACGAATTAATATGACAGATGTAACCGCGTCGTTAATCAAGATCAAAACCTCATTCATCCGGTGA 2367 0.3519 MCLQLPQIEIFSLSANHFEGAIPRSIGNCTSLQKLFLGNNFFTGSIPMEIGHLSKLQLLALGNNILSGPIPSKGFNISTMELFHIELNSFSGMLPSNIGLSLPNLHGLYMYGNKFVGKIPNSISNALNLVRVDLSENEFSGIIPNSFGDLTVLLEHLILSINNLTLIDDSHEFNFFTSLTSCRYLTYLEVSENILLSKLPKSIGNLSVKYFMSDYCGIKGNIPLEIGNMSNIIQLSLIRNDLSGSIPSTIKGLHKLQSLNLGYNGLQGSIIDELCDIRSLSELYLTSNKLFGVLPTCLGNMTSLRKFYIGSNRLTSRIPSSFWNLKDILEVNLSSNTLIGNLPPEIKNLRALVLLDLSRNQISSNFPTAISFLTTLETLSLAYNKLNGPIPTSLGEMSLSYLKYINLSYNRFQGEIPDGGSFKRFKAQSFMHNEQGRTQGPRLQVPPCDKQIRKKSMTKLLLIKCLLPIIVFAIFVVACIILRLHIRERIESSLERGLSIIGVPRRISYYELVQATNGFSESNLLGRGGFGSVYKGMLSSGKIIAIKVLDLTLEATSRSFDAECNAMRNLRHRNLVQIISSCSNPDFKSLVMEFMTNGSVEKWLYSDNYCLDFLQRLNIMIDVASALEYLHHGSSIPVVHCDLKPSNVLLDEDMVAHVSDFGISKLLDEGHSKTHTETLATLGYVAPGVISVKGDVYSYGIMLMEMFTGKKPTDEMFSEELTLKTCVSESMANSNMEVVDYNLDSQHGKEIHDILALALRCCEDSPEARINMTDVTASLIKIKTSFIR* 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4472 788 SUPERFAMILY L domain-like 181 433 - -
Mal4g4472 788 Gene3D Ribonuclease Inhibitor 173 448 IPR032675 -
Mal4g4472 788 SUPERFAMILY L domain-like 4 207 - -
Mal4g4472 788 Gene3D Transferase(Phosphotransferase) domain 1 595 786 - -
Mal4g4472 788 Pfam Protein kinase domain 520 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g4472 788 SUPERFAMILY Protein kinase-like (PK-like) 500 779 IPR011009 -
Mal4g4472 788 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 398 787 - -
Mal4g4472 788 ProSitePatterns Serine/Threonine protein kinases active-site signature. 638 650 IPR008271 GO:0004672|GO:0006468
Mal4g4472 788 Gene3D Phosphorylase Kinase; domain 1 502 594 - -
Mal4g4472 788 Pfam Leucine rich repeat 278 338 IPR001611 GO:0005515
Mal4g4472 788 SMART serkin_6 519 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g4472 788 Gene3D Ribonuclease Inhibitor 1 172 IPR032675 -
Mal4g4472 788 ProSitePatterns Protein kinases ATP-binding region signature. 525 547 IPR017441 GO:0005524
Mal4g4472 788 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 398 787 - -
Mal4g4472 788 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 7 397 - -
Mal4g4472 788 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 7 397 - -
Mal4g4472 788 ProSiteProfiles Protein kinase domain profile. 519 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4472 Mal-Chr4 122850050 122853395 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4472 11 788 Receptor kinase-like Gene Family AT3G47570 36.342 1.13e-154 475
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mal4g4472 Pkinase 4.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4472 - K13420 mtr:MTR_6g040210 1194.49