Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4451 ATGATGGAAGAAGCTCAGGGAAGTTCCAACAGCAGCATGCCTCCTTTTCTTACAAAGACTTATGAGATGGTTGATGATCCTTCAACTGATGCCATTGTTTCATGGAATGTTACCAATAGAAGTTTCATTGTTTGGAATACAGCTGAATTTGCTAAAGAGTTGTTACCTAAATACTTTAAGCATAATAACTTCTCAAGTTTCAACAGACAGCTTAATACCTATGGATTTAGAAAAGTTGATCCAGAAAAATGGGAATTTGCAAATGATGACTTTGTTAGAGGTCAACCACATCTATTGAACAACATCCGTAGGCGCAAACCAGTTCATAGCCATTCTGTGCCGAACGCTCATGGCCAAGGTGCTGCTGCTCCACTTACTGAATTTGAACGGTTGAGTTTGAAAGCGAAGATCGAGCAACTTAAACAGGAAAAGGAACAACTGCTTCTCGAATGTCAGAGAGAGGAACAGGAGAGTAAAACGAATGAGATACAATTACAGCACTCGAAGGATCAGTTGGAAACGTTGGAACAGAAGCAGCAAAGTATGCTCTCTTCTGTTGGTAAAGCGCTGCAGAAACCTGGAATTGAGTTTGGTATCTGGTCACCGACAGAAAATACGGAGAGAAAACGGAGGTTGCCAAGAAACAGTCCGTTTAGTAATGAAAACGGCGAGAGTGCATCTGTTCTCTCGTTAAACATGGAACGGTTAAATCTCCTCGACTCATCGATGACGTTTTGGGAGAACATTGCAAATGATGTCGGTGACACTTCTTCTCAAAGTCATCCGAACGTAGAATTTGATGATTCTATGAATTCTGTTGAAGTTCAGCCCAAGTCACCGGAAACCGGCATAAACTTTGTGCCAGTGGTAGCCGTTCCTGATCCAGTTGCAGCTGAGCCAGAGGTAGTTGTTTTTACTGATCCTCTTGCAACTGGGCCGGAGGTAATCGTTGTTCATAATCCTGTTGCAACTGAGCCAGCGGTAACCGAGGCTCCTGATCGTGTTGCAACTGAGCCAACTGATTCAGTTTCATCAGAAGAACAAGCTGTCGTAACATCCCGAGTTACTACTGGTCATAATGACGAATTTTGGGGACAATACTTGCAGGACGAGTCGGAAAATGAAGGTAAGCCTGGTCAAGTTGGCAAATATTGGTGGAACAACAAGAGTCTAAATCACCTTCCAATTACAAAACGGATGGGGCATTCTTAG 1212 0.4299 MMEEAQGSSNSSMPPFLTKTYEMVDDPSTDAIVSWNVTNRSFIVWNTAEFAKELLPKYFKHNNFSSFNRQLNTYGFRKVDPEKWEFANDDFVRGQPHLLNNIRRRKPVHSHSVPNAHGQGAAAPLTEFERLSLKAKIEQLKQEKEQLLLECQREEQESKTNEIQLQHSKDQLETLEQKQQSMLSSVGKALQKPGIEFGIWSPTENTERKRRLPRNSPFSNENGESASVLSLNMERLNLLDSSMTFWENIANDVGDTSSQSHPNVEFDDSMNSVEVQPKSPETGINFVPVVAVPDPVAAEPEVVVFTDPLATGPEVIVVHNPVATEPAVTEAPDRVATEPTDSVSSEEQAVVTSRVTTGHNDEFWGQYLQDESENEGKPGQVGKYWWNNKSLNHLPITKRMGHS* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4451 403 Gene3D - 8 106 IPR036388 -
Mal4g4451 403 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-4C 2 375 - -
Mal4g4451 403 SUPERFAMILY "Winged helix" DNA-binding domain 11 105 IPR036390 -
Mal4g4451 403 Coils Coil 130 178 - -
Mal4g4451 403 PRINTS Heat shock factor (HSF) domain signature 54 66 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal4g4451 403 PRINTS Heat shock factor (HSF) domain signature 67 79 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal4g4451 403 PRINTS Heat shock factor (HSF) domain signature 16 39 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal4g4451 403 SMART hsfneu3 12 105 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal4g4451 403 MobiDBLite consensus disorder prediction 201 226 - -
Mal4g4451 403 Pfam HSF-type DNA-binding 16 105 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal4g4451 403 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 2 375 IPR027725 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4451 Mal-Chr4 122615141 122617121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4451 1 402 HSF AT4G18880 39.310 2.61e-81 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mal4g4451 HSF_DNA-bind 5e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4451 K09419 - gmx:100820566 375.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g4451 4 122615141 122617121 Mal4g4451 4 122615141 122617121 ECH
Mal7g4379 7 111260826 111262127 Mal4g4451 4 122615141 122617121 PCT