Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4442 ATGGGTGATGTGGTTATGAATGTAAACGATGATGCTACCAAAAAATGTGACGAAACAAGCATTGATGATCATGTTCCTCTTTTGCAAAAGTTGGTAGCAGAGGTGGTGGGAACATTTTTCTTGATATTTGCTGGATGTGGTTCTGTGGTGGTGAACCTTAACAATGATAATGTAGTGACACTTCCTGGAATTGCAATTGTTTGGGGACTTACTGTTATGGTATTGGTCTATTCTATTGGTCACATCTCTGGTGCCCATTTCAATCCTGCTGTCACCATTGCTCATGCTTCTACCAAAAGATTTCCATTGAAGCAGGTACCAGCTTATATAATTGCTCAGGTCGCTGGCTCAACACTTGCAAGTGGAGCTCTCAAACTTATATTCAGTGGCAAGGAAAATAAATTTGCAGGAACACTTCCAGCTGGTTCTGACCTTCAAGCTTTTGTGGTCGAATTTATTATCACTTTCTACCTTATGTTCATCATTTCTGGAGTTGCCACTGATAATAGAGCGATTGGTGAATTGGCTGGACTTGCAGTTGGATCTACAGTTATATTGAATGTGTTGCTTGCGGGACCCATCACAGGAGCATCAATGAATCCAGCAAGAAGCTTAGGGCCAGCTATTGTGCACCATGAATATAGAGGAATATGGATATATATTGTGTCACCTATTGTAGGAGCTTTGGCTGGTACATGGGCCTACACTTTCCTCAGAATCACAAATAAGCCAGTTCGTGAGCTCACCAAGAGTTCTTCATTCCTCAAAGGTTCAGGAAGCAAATGA 786 0.416 MGDVVMNVNDDATKKCDETSIDDHVPLLQKLVAEVVGTFFLIFAGCGSVVVNLNNDNVVTLPGIAIVWGLTVMVLVYSIGHISGAHFNPAVTIAHASTKRFPLKQVPAYIIAQVAGSTLASGALKLIFSGKENKFAGTLPAGSDLQAFVVEFIITFYLMFIISGVATDNRAIGELAGLAVGSTVILNVLLAGPITGASMNPARSLGPAIVHHEYRGIWIYIVSPIVGALAGTWAYTFLRITNKPVRELTKSSSFLKGSGSK* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4442 261 TIGRFAM MIP: MIP family channel proteins 33 235 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal4g4442 261 PRINTS Major intrinsic protein family signature 105 124 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal4g4442 261 PRINTS Major intrinsic protein family signature 218 238 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal4g4442 261 PRINTS Major intrinsic protein family signature 150 168 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal4g4442 261 PRINTS Major intrinsic protein family signature 181 203 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal4g4442 261 PRINTS Major intrinsic protein family signature 29 48 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal4g4442 261 PRINTS Major intrinsic protein family signature 68 92 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal4g4442 261 SUPERFAMILY Aquaporin-like 24 249 IPR023271 -
Mal4g4442 261 ProSitePatterns MIP family signature. 86 94 IPR022357 -
Mal4g4442 261 CDD MIP 29 238 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal4g4442 261 PANTHER AQUAPORIN NIP2-1 3 258 IPR034294 -
Mal4g4442 261 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 3 258 - -
Mal4g4442 261 Pfam Major intrinsic protein 24 235 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal4g4442 261 Gene3D Glycerol uptake facilitator protein. 3 251 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4442 Mal-Chr4 122498211 122500045 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4442 13 261 Major Intrinsic Protein MIP AT5G37820 60.643 2.97e-103 301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g4385 7 111348994 111351299 Mal4g4442 4 122498211 122500045 PCT