Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4441 ATGGCTGATAATTCAGAAAACAATGAAATTCATCATGAGGTAGTTTTAGATGTAAACTGTGATGCCTCAAAAAAGTGTGAAGAGTCAGGCATCAAAGATTCTGTGCCTCTTTTCAAGAAGTTGGTAGCAGAAGTGATCGGAACATACATGATGATATTTGCGGGGTGTGCTGCTGTTATTGTGAATCTTAACAATGATCATGTAGTAACACTTCCTGGAATTGCATTTACATGGGGATTCACTGTTATGGTATTGATTTATTCTGTTGGTCATATCTCTGGTGCTCATTTCAACCCTGCTGTTACCATTGCTTTTGCTTCTACTAGAAGATTTCCCTTTAAGCAGGTACCAGCTTATATTATAGCTCAGGTCGTTGGATCCACATTAGCAAGTGGAACCCTCAGACTTATATTTAATAATGGTGAAGATGATCATTTTATTGGAACACTTCCAGCTGGTTCTGATCTACAAGCTTTTGTAATCGAATTCATATGCACTTTCTTCCTTATGTTTGTTATTACTGGAGTTGCCACCGATAACAGAGCGATTGGTGAATTAGCCGGGCTTGCAATTGGGTCTACAATAATAATAGATATATTATTTGCGGGACCAATGACAGGTGCATCGATGAATCCAGCAAGGAGCTTAGGACCTGCTTTTTTGTACCATGAATATACAGGATTATGGATATATTTGATTTCACCAATACTAGGAGCTTTGGTAGGTACATGGACTTACAATTTCATCAAGCACACAAGCAAGCCGACGTGTAATGAGACCAAGATTGAGCTCACCAAGATTGTCCCTTTCCTCAGAAGGAGCAGGTCGTAA 831 0.3923 MADNSENNEIHHEVVLDVNCDASKKCEESGIKDSVPLFKKLVAEVIGTYMMIFAGCAAVIVNLNNDHVVTLPGIAFTWGFTVMVLIYSVGHISGAHFNPAVTIAFASTRRFPFKQVPAYIIAQVVGSTLASGTLRLIFNNGEDDHFIGTLPAGSDLQAFVIEFICTFFLMFVITGVATDNRAIGELAGLAIGSTIIIDILFAGPMTGASMNPARSLGPAFLYHEYTGLWIYLISPILGALVGTWTYNFIKHTSKPTCNETKIELTKIVPFLRRSRS* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4441 276 Pfam Major intrinsic protein 34 246 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal4g4441 276 Gene3D Glycerol uptake facilitator protein. 2 263 IPR023271 -
Mal4g4441 276 PRINTS Major intrinsic protein family signature 115 134 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal4g4441 276 PRINTS Major intrinsic protein family signature 78 102 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal4g4441 276 PRINTS Major intrinsic protein family signature 192 214 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal4g4441 276 PRINTS Major intrinsic protein family signature 161 179 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal4g4441 276 PRINTS Major intrinsic protein family signature 229 249 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal4g4441 276 PRINTS Major intrinsic protein family signature 39 58 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal4g4441 276 SUPERFAMILY Aquaporin-like 35 260 IPR023271 -
Mal4g4441 276 ProSitePatterns MIP family signature. 96 104 IPR022357 -
Mal4g4441 276 CDD MIP 39 249 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal4g4441 276 TIGRFAM MIP: MIP family channel proteins 43 246 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal4g4441 276 PANTHER AQUAPORIN NIP2-1 1 261 IPR034294 -
Mal4g4441 276 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 1 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4441 Mal-Chr4 122495614 122497512 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4441 4 272 Major Intrinsic Protein MIP AT5G37820 53.091 1.82e-92 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4441 K09874 - gmx:100812577 397.512