Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4406 ATGGCACAAAACACTGAGGTTGATGATCATGGAAGAGACAACAAAGCATCATTATTGTTAATTTACCTGGCTGCTGGGTCTGGAATAGCATCATTCCTACAGGTATCATGTTGGATGGTGACAGGAGAAAGACAAGCTGCAAGGATTCGTAGTTTGTACTTGAAAACCATATTAAAGCAGGATATTGCATTCTTTGACACTGAAACAAACACAGGAGAGGTAATTGGTAGAATGTCTGGTGACACAATTCTCATTCAAGATGCTATGGGAGAGAAGGTATATATACTAGATGTAGTTTTGCTTGCATGTATACCTTGTGTTGTTGTTGGTGGTGGATTCATGTCTATGTTGATGGCTAAAATGTCGAGTCGTGGACAAGCTGCTTATTCAGAAGCAGGAAATGTTGTTGATCAAACAGTAGGAGCCATCAGAACATTAAAAATTGCTTATACTACAACGGTTCAACAAGGAATTGCCTCAGGGTTAGGAATGGGGGCACTGTCTTTGATTGTGTTTAGCACTTATGGACTTGCCATGTGGTATGGTTCCAAGTTAGTCCTTCAGAAAGGATATACTGGTGGGACTGTCATGATTGTAATCATAGCTCTCATGACTGGTGGAATGTCATTGGGTCAGACATCACCATGCTTAGATGCATTTGCTGCAGGCCAAGCAGCAGCATATAAAATGTTTGAGACAAATAAAAGAAAGCCTAAAATTGATGCTTATGACACAAGTGGTGTTGTCTTGGAAGATATAAAGGGAGATATTGAACTTAAAGATGTTTATTTCAGATATCCTGCAAGGCCAGATGTGCAGATCTTTGCTGGATTCTCACTGTCTGTTCCAAGTGGCACAACTACTGCTCTGGTGGGTCAAAGTGGAAGTGGAAAGTCTACTGTAATCAGTTTATTGGAAAGATTCAATGATCCAGATGCTGGAGAAGTACTTATAGATGGTGTGAATTTGAAGAATTTTCAAGTTAGATGGATAAGAGAGCAGATTGGGTTGGTCAGTCAAGAACCTATCTTGTTTACTACTTCTATCAGAGAGAATGTAGCATATGGGAAAGGTGCAACTGATGAGGAGATAACAACAGCAATAACACTTGCCAATGCTAAAAAGTTCATTGACAAGTTACCTCAGGGCCTTGGAACCATGGCAGGGCAAAATGGGACTCAGCTTTCTGGTGGGCAAAAGCAAAGAATCGCAATTGCAAGAGCAATATTGAAGAACCCAAGAATCCTTCTTCTTGATGAAGCAACAAGTGCATTGGATGCCGAGTCTGAACGTATTGTTCAAGAAGCTTTAGAAAAAGTGATGTTTAAAAGGACTACTGTTGTTGTTGCACATCGTTTAACAACTATTAGAAATGCAGACACCATAGCAGTACATCAGGGAAAAATCGTGGAGAAAGCTAATCAAGAAAGAGAAAAAGAAAGCCAAAAGACTGAAGCAGATGAGTCAAAGAGAATTTCCTATGTGAAATCAATAAGCCAAAGATCACCAGGGAGATTTTCCCATCAAAGTAGTGTAAAAATAGAAGAACCAAATATTGAAGAAGGTCTACTTGATAATAACAAGAAACACAGTAACGTTTCTATTAAACGTTTGGCCTACTTGAATAAACCTGAGGTTCCTGTCTTACTACTTGGATCCATTGCAGCAATAGTGCATGGTGTAGTGTTCCCCATATTTGGCCTAGTGTTTTCATCAGCCATTATTATGTTTTATGAACCTCCAGAACAACAGAAGAAAGATGCTAGGCTCTGGTCACTTCTATATGTGGGTCTGGGTTTGGTTACTCTAGTGATTGTACCACTGCAGAATTACTTCTTCGGGATTGCAGGTGGAAAACTTGTAGAAAGAATTTGTTCGTTGACATTTGCAAAAGTTGTGCACCAAGAAATAAGATGGTTTGATGACCCTGCAAATTCAAGTTGGTGCAAGGTTATCCACCGACGCTTCAATTGTGAAAAGTCTTGTTGGCGACACATTGGCCCTCATAGTTCAAAACATATCACAATCACAGCTGGTCTAGTTCTAGCATTCATTGCTAACTGGATTCTCGCTTTTGTAGTTTTGTCTGTGTCACCTATGGTTCTTATGCAAGGAATCTTTCAGATGAAGTTTCTTAAAGGATTCAGTGCTGATGCCAAGGTAATGTATGAAGAGGCAAGTCAGGTGGCAAATGATGCTGTTAGTAGCATCAGAACAGTTGCATCATTTTGTGCAGAATCAAAGGTAATGGATATGTACCACAAGAAATGTTCAGGGACAAAAAAACAAGGTGTTCATTTGGGGCTTGTGAGTGGCGCAGGATTTGGTTTCTCTTTTGTCGGTCTATATTGCATGAGTGCATTTTGTTTCTACATAGGATCTGTTCTAGTGCAACATGGGAAAGCAAGTTCTGCAGAGGTTTTCAAGGTTTTCTTTAGTTTAACAATAACAGCCGTAGGCATTTTCTCAGCCAAAGATTCTGCAGCTTCAATTTTTGAAATTCTAGATAGTAACTCTACTATCGACTCTAGTAGCAATGAAGGTGTAACATTAGAAACAGTAACAGGTGATATTGAACTTCAACATGTCAGCTTTAATTACCCAACAAGGCCTCATATTCAAATTTTCAAAGAATTATGTCTAAGCATCCCTGCTGGAAAGACTGCTGGCTTGGTTGGAGAAAGTGGAAGTGGAAAATCAACAGTTATAAGCCTCTTAGAAAGATTTTATAACCCTGACTTTGGACATGTATTACTAGATGGAGTGGATATAAAAACTTTCAGACTAGGCTGGCTAAGACAACAAATGGGTATGGTTGGTCAGGAGCCTATTCTTTTCAACGAAAGCATCCGTGCCAACATAGCTTATGGCAAAGAAGGAGGTGCGACGGAGGATGAGATAATTGCAGCAACTAACACAGCCAATGCACACAACTTCATAAGTTCTCTTCCAAATGGTTATGACACCTCTGTTGGGGAAAGAGGCACACAACTGTCCGGAGGACAAAAGCAGCGTATTGCTATTGCAAGAGCCATGCTGAAAAATCCCAAAATACTCTTGCTTGATGAGGCAACAAGTGCACTTGATGCCGAGTCAGAGCGTATAGTTCAAGAGGCTCTAGATAGAGTGAGTGTGAACAAAACTACTGTGATGGTGGCTCACCGCCTTACAACAATTCGAGGGGCAGATACTATAGCGGTAATTAAAATGGGGTGGTTGCTGAAAAGGGAAGTCATGATGTGA 3243 0.4024 MAQNTEVDDHGRDNKASLLLIYLAAGSGIASFLQVSCWMVTGERQAARIRSLYLKTILKQDIAFFDTETNTGEVIGRMSGDTILIQDAMGEKVYILDVVLLACIPCVVVGGGFMSMLMAKMSSRGQAAYSEAGNVVDQTVGAIRTLKIAYTTTVQQGIASGLGMGALSLIVFSTYGLAMWYGSKLVLQKGYTGGTVMIVIIALMTGGMSLGQTSPCLDAFAAGQAAAYKMFETNKRKPKIDAYDTSGVVLEDIKGDIELKDVYFRYPARPDVQIFAGFSLSVPSGTTTALVGQSGSGKSTVISLLERFNDPDAGEVLIDGVNLKNFQVRWIREQIGLVSQEPILFTTSIRENVAYGKGATDEEITTAITLANAKKFIDKLPQGLGTMAGQNGTQLSGGQKQRIAIARAILKNPRILLLDEATSALDAESERIVQEALEKVMFKRTTVVVAHRLTTIRNADTIAVHQGKIVEKANQEREKESQKTEADESKRISYVKSISQRSPGRFSHQSSVKIEEPNIEEGLLDNNKKHSNVSIKRLAYLNKPEVPVLLLGSIAAIVHGVVFPIFGLVFSSAIIMFYEPPEQQKKDARLWSLLYVGLGLVTLVIVPLQNYFFGIAGGKLVERICSLTFAKVVHQEIRWFDDPANSSWCKVIHRRFNCEKSCWRHIGPHSSKHITITAGLVLAFIANWILAFVVLSVSPMVLMQGIFQMKFLKGFSADAKVMYEEASQVANDAVSSIRTVASFCAESKVMDMYHKKCSGTKKQGVHLGLVSGAGFGFSFVGLYCMSAFCFYIGSVLVQHGKASSAEVFKVFFSLTITAVGIFSAKDSAASIFEILDSNSTIDSSSNEGVTLETVTGDIELQHVSFNYPTRPHIQIFKELCLSIPAGKTAGLVGESGSGKSTVISLLERFYNPDFGHVLLDGVDIKTFRLGWLRQQMGMVGQEPILFNESIRANIAYGKEGGATEDEIIAATNTANAHNFISSLPNGYDTSVGERGTQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAESERIVQEALDRVSVNKTTVMVAHRLTTIRGADTIAVIKMGWLLKREVMM* 1081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4406 1080 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 17 222 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal4g4406 1080 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 15 476 - -
Mal4g4406 1080 MobiDBLite consensus disorder prediction 473 493 - -
Mal4g4406 1080 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 15 476 IPR039421 -
Mal4g4406 1080 CDD ABC_6TM_Pgp_ABCB1_D1_like 14 217 - -
Mal4g4406 1080 Pfam ABC transporter transmembrane region 550 819 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal4g4406 1080 Pfam ABC transporter transmembrane region 13 95 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal4g4406 1080 Pfam ABC transporter 877 1026 IPR003439 GO:0005524
Mal4g4406 1080 CDD ABC_MTABC3_MDL1_MDL2 257 472 - -
Mal4g4406 1080 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 503 1072 - -
Mal4g4406 1080 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 247 474 IPR027417 -
Mal4g4406 1080 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 858 1080 IPR003439 GO:0005524
Mal4g4406 1080 CDD ABC_6TM_Pgp_ABCB1_D2_like 539 841 - -
Mal4g4406 1080 ProSitePatterns ABC transporters family signature. 998 1012 IPR017871 GO:0005524
Mal4g4406 1080 Coils Coil 470 492 - -
Mal4g4406 1080 Pfam ABC transporter 278 423 IPR003439 GO:0005524
Mal4g4406 1080 SUPERFAMILY ABC transporter transmembrane region 536 836 IPR036640 GO:0005524|GO:0016021
Mal4g4406 1080 Gene3D - 848 1073 IPR027417 -
Mal4g4406 1080 Gene3D - 247 528 IPR027417 -
Mal4g4406 1080 SMART AAA_5 284 474 IPR003593 -
Mal4g4406 1080 SMART AAA_5 885 1071 IPR003593 -
Mal4g4406 1080 CDD ABC_MTABC3_MDL1_MDL2 858 1071 - -
Mal4g4406 1080 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 257 492 IPR003439 GO:0005524
Mal4g4406 1080 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 847 1074 IPR027417 -
Mal4g4406 1080 Gene3D ABC transporter type 1, transmembrane domain 96 821 IPR036640 GO:0005524|GO:0016021
Mal4g4406 1080 ProSitePatterns ABC transporters family signature. 395 409 IPR017871 GO:0005524
Mal4g4406 1080 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 503 1072 IPR039421 -
Mal4g4406 1080 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 550 816 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal4g4406 1080 SUPERFAMILY ABC transporter transmembrane region 15 238 IPR036640 GO:0005524|GO:0016021
Mal4g4406 1080 Gene3D ABC transporter type 1, transmembrane domain 16 95 IPR036640 GO:0005524|GO:0016021
Mal4g4406 1080 Gene3D ABC transporter type 1, transmembrane domain 822 847 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4406 Mal-Chr4 121873820 121879212 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4406 14 475 Calmodulin-binding Proteins AT2G36910 38.095 9.33e-93 321
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g4406 4 121873820 121879212 Mal4g4406 4 121873820 121879212 ECH