Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4405 ATGATCATTGGTACTATCTCTGCTGTTGCTAATGGAATGACACAGCCTATCATGACTCTTATTCTTGGCAAAATCATCAACATCTTTGGCTCTACAGATCCTCACCATATGGTCAAAGAAGTTTCTAAGGCTTCATTATTGTTCATTTACCTGGCTGTTGGATCTGGAATACTATCATTCCTACAGGTATCATGTTGGATGGTGACAGGAGAAAGACAAGCTGCAAGGATTCGTAGCTTGTACTTGAAAACCATATTAAAGCAGGATATTGCATTCTTTGACACTGAAACAAATACAGGAGAAGTAATTGGGAGAATGTCTGGTGACACAATTCTCATTCAAGATGCTATGGGAGAGAAGGTTGGGAAGTTTATTCAACTTGCTGCAACATTTTTTGGTGGCTTTGTGGTTGCCTTTGTAAAAGGATGGAGACTAGCTGTAGTTTTGCTTGCATGTATACCTTGTGTTGTTGTTGTTGGTGGATTCATGTCTATGTTGATGGCTAAAATGTCGAGTCGTGGACAAGCTGCTTATTCAGAAGCAGGAAATGTCGTTGATCAAACAGTAGGAGCCATCAGAACAGTTGCATCTTTTACTGGGGAGAAAAAAGCAATAGAAAAGTACAATAGCAAGTTAAAAGTTGCTTATACTACAACTGTTCAACAGGGAATTGCCTCAGGGTTAGGAATGGGGACACTGTCTTTGATTGTCTTTAGCACTTATGGACTTGCAATGTGGTATGGTTCCAAATTAGTCCTTGAGAAAGGATATACTGGTGGAACTGTCATGATTGTTATCATAGCTCTCATGACTGGTGGAATGTCGTTGGGTCAGACATCACCATGCTTAGATGCATTTGCTGCAGGCCAAGCAGCAGCATATAAAATGTTTGAGACAATTAAAAGAAAGCCTAAAATTGATGCTTATGACACAAGTGGTGTTGTCTTGGAAGACATAAAAGGAGATATTGAACTTAAAGATGTTTATTTCAGATATCCTGCAAGACCAGATGTGCAGATCTTTGCTGGATTCTCATTGTTTGTTCCAAGTGGCACAACTACTGCTTTGGTGGGTCAAAGTGGAAGTGGAAAGTCTACTGTAATCAGTTTATTGGAAAGATTCTATGATCCTGAAGCTGGAGAAGTACTAATAGATGGTGTGAATTTGAAGAACTTGCAACTTAGATGGATAAGAGAACAGATTGGGCTGGTTAGTCAAGAACCTATCCTGTTTACTACTTCTATTAGAGAGAACATAGCATATGGGAAAGAAGTTAACAATACTGTGGTATTTTGTTTGCAGGGTCTGGAGACCATGGCAGGGCAAAATGGGACTCAACTTTCTGGTGGACAAAAGCAAAGAATTGCAATTGCAAGGGCAATATTGAAGAATCCAAGAATCCTTCTTCTTGATGAAGCAACAAGTGCATTGGATGCTGAGTCTGAACGTGTTGTTCAAGAAGCATTGGACAAAGTTATGACACAAAGAACTACTGTAGTTGTTGCACATCGTTTAACAACTATAAGAAATGCTGACATAATAGCAGTGGTTCATCAGGGCAAAATAGTGGAAAAAGGAGCACATGATGAGTTAATCAAGGATGTAGATGGTGCTTATTCTCAGCTTATTCGTCTACAAGAAGGAGAAAAAGAAAGCCAAAAGTCTGAAGCAGATAAGTCAAGTCACATTTTAAATAGTCAAATGGCTAGATCTTCTAACCAGAGAATTTCCTTAGTGAAATCAATAAGCCAAAGATCATCAGGGAGACACTCCCTATCAAATAGATTTTCTCTTCCTCATGAAAGTGGTGTACAAACAGAGGAACCAAATATTGAAGAAGGTCAATTTGATAAGAAACACAAAAACGTTTCTATAAGACGTTTGGCCTACCTGAACAAACCTGAGCTTCCTGCCTTACTACTTGGATCTGTTGCTGCAATAGTGAATGGTGCAGTGTTCCCTATATTTGGCCTAGTATTTTCATCCGCCATTACTATGTTTTATGAACCTCCAGAACAACAAAGGAAAGATGCTAGGCTCTGGTCACTTCTATATGTGGGTCTGGGTTTGGTTACTATAGTGATTTTACCACTGCAGAATTACTTCTTCGGGATTGCAGGTGGAAAACTTGTAGAAAGAATTCGTTCGTTGACATTTGCAAAAGTTGTGCACCAAGAAATAAGTTGGTTTGATGACCCTGCAAATTCAAGTGGTGCAGTTGGTGCAAGATTATCCATGGACGCTTCAACTGTGAAAAGTCTTGTTGGTGACACATTGGCCCTCATAGTGCAAAACATATCAACAATCACAGCTGGTCTAGTTCTAGCATTCACTTCTAATTGGATTCTGGCTTTTATAGTTTTGGCTGTGTCACCAGTGATCCTTGTGCAAGGAGTTATTCAGATGCAATTTCTTAAAGGATTCAGTGGAGATGCCAAGGTGATGTATGAAGAGGCAAGTCAGGTAGCAAATGATGCTGTTAGTAGCATCAGAACTGTTGCATCATTTAATGCAGAGTCAAAGGTGATGGATATGTACCAGAAGAAATGTTCAGGGCCAGAAAAACAAGGTGTTCGTTTGGGGCTTGTGAGTGGTGCAGGATTCGGTTTCTCTTTTCTCGCTTTACATTGCATGAGTGCTTTTTGTTTCTACATAGGATCTGTTCTAGTGCAACATGGGAAAGCAACTTTTCAAGAGGTTTTCAAGGTTTTCTTTAGTTTAACAATAACAGCCGTAGGCATTTCTCAGTCTAGTACCTTGGCACCAGACACTAACAAGGCCAAGGATTCCGCAGCTTCAATATTTGATATTCTAGACAGTAACCCTACTATTGACTCCAGTAGCAATGAAGGTGTAACATTAGAAACAGTTTTAGGCGATATTGAACTTCAACATGTCAGCTTCAATTACCCAACAAGGCCTCATATTCAAATTTTCAAAGATTTATGTCTAAGCATCCCTGCCGGAAAGACTGTTGCTTTGGTTGGGGAAAGTGGCAGTGGAAAATCAACAGTTATAAGTCTCTTAGAGAGATTTTATAATCCTAATTCTGGACATGTATTACTAGATGGAGTGGATATCAAAACTTTCAGATTAAGCTGGTTGAGACAACAAATGGGTTTGGTTGGTCAAGAGCCTATTCTTTTCAACGAAAGCATTCGTGCCAACATAGCTTATGGCAAAGAAGGAGGTGCTACAGAGGATGAGATCATTGCAGCAGCAAACGCAGCCAATGCACACAACTTCATAAGTTCTCTTCCAAATGGTTACGACACTTCTGTTGGGGAAAGAGGCACACAACTATCAGGAGGGCAAAAGCAACGTATTGCTATTGCAAGAGCCATGCTGAAAAACCCGAAAATACTTTTGCTTGATGAGGCAACAAGTGCACTTGATGCTGAGTCAGAGCGTATAGTTCAAGAGGCTCTAGATAGAGTGAGTGTGAACAGAACTACTGTGATGGTGGCTCACCGCCTTACAACAATTCGAGGGGCTGATACTATTGCGGTAATTAAAAATGGGGTGGTTGCTGAAAAGGGAAGTCATGATGCGTTGATGAAGATTACTGATGGTGTTTATGCTTCATTAGTATCTCTTCATTCAAGTGCATCATAA 3615 0.4 MIIGTISAVANGMTQPIMTLILGKIINIFGSTDPHHMVKEVSKASLLFIYLAVGSGILSFLQVSCWMVTGERQAARIRSLYLKTILKQDIAFFDTETNTGEVIGRMSGDTILIQDAMGEKVGKFIQLAATFFGGFVVAFVKGWRLAVVLLACIPCVVVVGGFMSMLMAKMSSRGQAAYSEAGNVVDQTVGAIRTVASFTGEKKAIEKYNSKLKVAYTTTVQQGIASGLGMGTLSLIVFSTYGLAMWYGSKLVLEKGYTGGTVMIVIIALMTGGMSLGQTSPCLDAFAAGQAAAYKMFETIKRKPKIDAYDTSGVVLEDIKGDIELKDVYFRYPARPDVQIFAGFSLFVPSGTTTALVGQSGSGKSTVISLLERFYDPEAGEVLIDGVNLKNLQLRWIREQIGLVSQEPILFTTSIRENIAYGKEVNNTVVFCLQGLETMAGQNGTQLSGGQKQRIAIARAILKNPRILLLDEATSALDAESERVVQEALDKVMTQRTTVVVAHRLTTIRNADIIAVVHQGKIVEKGAHDELIKDVDGAYSQLIRLQEGEKESQKSEADKSSHILNSQMARSSNQRISLVKSISQRSSGRHSLSNRFSLPHESGVQTEEPNIEEGQFDKKHKNVSIRRLAYLNKPELPALLLGSVAAIVNGAVFPIFGLVFSSAITMFYEPPEQQRKDARLWSLLYVGLGLVTIVILPLQNYFFGIAGGKLVERIRSLTFAKVVHQEISWFDDPANSSGAVGARLSMDASTVKSLVGDTLALIVQNISTITAGLVLAFTSNWILAFIVLAVSPVILVQGVIQMQFLKGFSGDAKVMYEEASQVANDAVSSIRTVASFNAESKVMDMYQKKCSGPEKQGVRLGLVSGAGFGFSFLALHCMSAFCFYIGSVLVQHGKATFQEVFKVFFSLTITAVGISQSSTLAPDTNKAKDSAASIFDILDSNPTIDSSSNEGVTLETVLGDIELQHVSFNYPTRPHIQIFKDLCLSIPAGKTVALVGESGSGKSTVISLLERFYNPNSGHVLLDGVDIKTFRLSWLRQQMGLVGQEPILFNESIRANIAYGKEGGATEDEIIAAANAANAHNFISSLPNGYDTSVGERGTQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAESERIVQEALDRVSVNRTTVMVAHRLTTIRGADTIAVIKNGVVAEKGSHDALMKITDGVYASLVSLHSSAS* 1205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4405 1204 CDD ABC_MTABC3_MDL1_MDL2 961 1197 - -
Mal4g4405 1204 Pfam ABC transporter 980 1129 IPR003439 GO:0005524
Mal4g4405 1204 Gene3D - 952 1203 IPR027417 -
Mal4g4405 1204 Gene3D ABC transporter type 1, transmembrane domain 47 935 IPR036640 GO:0005524|GO:0016021
Mal4g4405 1204 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 1 1201 - -
Mal4g4405 1204 SUPERFAMILY ABC transporter transmembrane region 1 307 IPR036640 GO:0005524|GO:0016021
Mal4g4405 1204 Pfam ABC transporter 344 475 IPR003439 GO:0005524
Mal4g4405 1204 ProSitePatterns ABC transporters family signature. 1101 1115 IPR017871 GO:0005524
Mal4g4405 1204 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 951 1199 IPR027417 -
Mal4g4405 1204 ProSitePatterns ABC transporters family signature. 447 461 IPR017871 GO:0005524
Mal4g4405 1204 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 1 1201 IPR039421 -
Mal4g4405 1204 SMART AAA_5 988 1175 IPR003593 -
Mal4g4405 1204 SMART AAA_5 350 521 IPR003593 -
Mal4g4405 1204 SUPERFAMILY ABC transporter transmembrane region 621 942 IPR036640 GO:0005524|GO:0016021
Mal4g4405 1204 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 961 1198 IPR003439 GO:0005524
Mal4g4405 1204 CDD ABC_MTABC3_MDL1_MDL2 323 546 - -
Mal4g4405 1204 CDD ABC_6TM_Pgp_ABCB1_D2_like 629 944 - -
Mal4g4405 1204 MobiDBLite consensus disorder prediction 559 604 - -
Mal4g4405 1204 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 640 926 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal4g4405 1204 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 313 546 IPR027417 -
Mal4g4405 1204 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 2 288 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal4g4405 1204 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 323 544 IPR003439 GO:0005524
Mal4g4405 1204 Gene3D - 321 559 IPR027417 -
Mal4g4405 1204 MobiDBLite consensus disorder prediction 547 613 - -
Mal4g4405 1204 CDD ABC_6TM_Pgp_ABCB1_D1_like 1 283 - -
Mal4g4405 1204 Pfam ABC transporter transmembrane region 640 912 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal4g4405 1204 Pfam ABC transporter transmembrane region 1 273 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4405 Mal-Chr4 121835405 121840908 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4405 1 1200 Calmodulin-binding Proteins AT2G36910 45.528 0.0 1041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g4405 4 121835405 121840908 Mal4g4405 4 121835405 121840908 ECH