Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4404 ATGGCACAAAACACTGAGGTTGATGATCATGGAAGAGACAACAAAGCCAACCAGAAAGTTCCATTCTACAAGCTCTTCACTTTTGCTGATAGCCTTGATGTGACATTGATGATCATTGGTACTATCTCTGCTGTTGCTAATGGAATGACACAGCCTATCATGACTCTCATTCTTGGCAAGATCATCAACATTTTTGGCTCTACAGATCCTCACCACATGGTCAAAGAAGTTTCTAAGGCTTCATTATTGTTCATTTACCTGGCTGTTGGATCTGGAATAGTATCATTCCTACAGGTATCATGTTGGATGGTGACAGGAGAAAGACAATCTGCAAGGATTCGTAGTTTGTACTTGAAAACCATATTAAAGCAGGATATTGCATACTTTGACACCGAAACAAATACAGGAGAAGTAATTGGCAGAATGTCTGGTGACACAATTCTCATTCAAGATGCTATGGGAGAAAAGGTTGGGAAGTTTATTCAACTTGCTGCAACATTTTTTGGTGGCTTTGTGGTTGCCTTTGTAAAAGGATGGAGACTAGCTGTAGTTTTGCTTGCATGTATACCTTGTGTTGTTGTTGTTGGTGGATTCATGTCCATGTTGATGGCTAAAATGTCGAGTCGTGGACAAGCTGCTTACTCAGAAGCAGGAAATGTTGTTGATCAAACAGTAGGAGCCATCAGAACAGTTGCATCTTTTACTGGGGAGAAAAAAGCAATAGAAAAGTACAATAGCAAGTTAAAAGTTGCTTATACTACAACTGTTCAACAAGGAATTGCCTCAGGGTTAGGAATGGGGACACTGTCTTTGATTGTCTTTAGCACTTATGGACTTGCAATGTGGTATGGTTCCAAATTAGTCCTTGAGAAAGGATATACTGGTGGAACTGTCATGATTGTTATCATAGCTCTCATGACTGGTGGAATGTCATTGGGTCAGACATCCCCATGCTTAGATGCATTTGCTGCAGGCCAAGCAGCAGCATATAAAATGTTTGAGACAATTAAAAGAAAGCCTAAAATTGATGCTTATGACACAAGTGGTGTTGTCTTGGAAGACATAAAGGGAGATATTGAACTTAAAGATGTTTATTTCAGATATCCTGCAAGACCAGATGTGCAGATCTTTGCTGGATTCTCATTGTTTGTTCCAAGTGGCACAACTACTGCTTTGGTTGGTCAAAGTGGAAGTGGAAAGTCTACTGTAATCAGTTTATTGGAAAGATTCTATGATCCTGAAGCTGGAGAAGTACTTATAGATGGTGTGAATCTGAAGAACTTGCAACTTAGATGGATAAGAGAACAGATTGGGCTGGTTAGTCAAGAACCTATCTTGTTTACTACTTCTATCAGAGAGAACATAGCATATGGGAAAGAAGGTGCAACTGATGAGGAGATAACAACAGCAATAAAACTTGCCAATGCCAAGAAATTCATTGACAAACTACCTCAGGGTCTTGACACCATGGCAGGGCAAAATGGGACTCAACTTTCTGGTGGACAAAAGCAAAGAATTGCAATTGCAAGGGCAATATTGAAGAACCCAAGAATCCTTCTTCTTGATGAAGCAACAAGTGCATTGGATGCTGAGTCTGAACGTGTTGTTCAAGAAGCATTGGACAAAGTTATGACACAAAGGACTACTGTAGTTGTTGCACATCGTTTAACAACTATAAGAAATGCCGACATAATAGCAGTGGTTCATCAGGGCAAAATTGTGGAAAAAGGAGCACATGATGAGTTAATCAAGGATGTAGATGGTGCTTATTCTCAGCTTATTCGTCTACAAGAAGGTGAAAAAGAAAGCCAAAAGTCTGAAGCAGATAAGTCAAGTCACATTTTAAATAGTCAAATGGCTAGATCTTCTAACCAGAGAATTTCCTTAGTGAAATCAATAAGCCAAAGATCATCAGGGAGACACTCCCAATCAAATAGATTTTCTCTTCCTCATGAAAGTGGTGTACAAACAGAGGAACCAAATATTGAAGAAGGTCAATTTGATAAGAAACGCAAAAACGTTTCTATAAGACGTTTGGCCTACCTGAACAAACCTGAGGTTCCTGCCTTACTACTTGGATCCGTTGCTGCAATAGTGAATGGTGCAGTGTTCCCTATATTTGGCCTAGTATTTTCATCCGCCATTACTATGTTTTATGAACCTCCAGAACAACAAAGGAAAGATGCTAGGCTCTGGTCACTTCTATATGTGGGTCTGGGTTTGGTTACTCTAGTGATTTTACCACTGCAGAATTACTTCTTCGGGATTGCAGGTGGAAAACTTGTAGAAAGAATTCGTTCGTTGACATTTGCAAAAGTTGTGCACCAAGAAATAAGTTGGTTTGATGACCCTGCAAATTCAAGTGGTGCAGTTGGTGCAAGATTATCCACCGACGCTTCAACTGTGAAAAGTCTTGTTGGTGACACATTGGCCCTCATAGTGCAAAACCTATCAACAATCACAGCTGGTCTAGTTCTAGCATTCACTTCTAATTGGATTCTGGCTTTTATAGTTTTGGCTGTGTCACCAGTGGTCCTTGTGCAAGGAATTATTCAGATGCAATTTCTTAAAGGATTCAGTGGAGATGCCAAGGTGATGTATGAAGAGGCAAGTCAGGTGGCAAATGACGCTGTTAGCGGCATCAGAACTGTTGCATCATTTAATGCAGAATCAAAGGTGATGGATATGTACCAGAAGAAATGTTCAGGGCCAGAAAAACAAGGTGTTCGTTTGGGGCTTGTGAGTGGTGCAGGATTTGGTTTCTCTTTTGTCGCTCTATATTGCATGAGTGCTTTTTGTTTCTACATAGGATCTGTCCTAGTGCAACATGGGAAAGCAACTTTTCAAGAGGTTTTCAAGGTTTTCTTTAGTTTAACAATAACAGCCGTAGGCATTTCTCAGTCTAGTACCTTGGCACCAGACACTAACAAGGCCAAAGATTCGGCAGCTTCAATATTTGATATTCTAGACAGTAACCCTACTATTGACTCCAGTAGCAATGAAGGTGTAACATTAGAAACAGTTACAGGCGATATTGAACTTCAGCATGTCAGCTTCAATTACCCAACAAGGCCTCATATTCAAATTTTCAAAGATTTATGTCTAAGCATCCCTGCCGGAAAGACTGTTGCTTTGGTTGGAGAAAGTGGAAGTGGAAAATCAACAGTTATAAGCCTCTTAGAGAGATTTTATAACCCTGACTCTGGACATGTATTACTAGATGGAGTGGATATCAAAACTTTCAGATTAAGCTGGTTGAGACAACAAATGGGTTTGGTTGGTCAAGAGCCTATTCTTTTCAACGAAAGCATTCGTGCCAACATAGCTTATGGCAAAGAAGGTGCTACAGAGGATGAGATCACTGCAGCAGCAAATGCAGCCAATGCACACAACTTCATAAGTTCTCTTCCAAATGGTTACGACACCTCTGTTGGGGAAAGAGGCACGCAACTATCAGGAGGGCAAAAGCAACGTATTGCTATTGCAAGAGCCATGCTGAAAAACCCGAAAATACTTTTGCTTGATGAGGCAACAAGTGCACTTGATGCTGAGTCAGAGCGAATAGTTCAAGAGGCTCTAGATAGGGTCAGTGTGAACAGAACTACTGTGGTGGTGGCTCACCGTCTTACAACAATTCGAGGAGCTGATACTATAGCAGTAATTAAAAATGGGGTGGTTGCTGAAAAGGGAAGACATGATGTGTTGATGAAGATTACCGATGGTGTTTATGCTTCATTAGTAGCTCTTCATTCAAGTGCATCATAA 3765 0.405 MAQNTEVDDHGRDNKANQKVPFYKLFTFADSLDVTLMIIGTISAVANGMTQPIMTLILGKIINIFGSTDPHHMVKEVSKASLLFIYLAVGSGIVSFLQVSCWMVTGERQSARIRSLYLKTILKQDIAYFDTETNTGEVIGRMSGDTILIQDAMGEKVGKFIQLAATFFGGFVVAFVKGWRLAVVLLACIPCVVVVGGFMSMLMAKMSSRGQAAYSEAGNVVDQTVGAIRTVASFTGEKKAIEKYNSKLKVAYTTTVQQGIASGLGMGTLSLIVFSTYGLAMWYGSKLVLEKGYTGGTVMIVIIALMTGGMSLGQTSPCLDAFAAGQAAAYKMFETIKRKPKIDAYDTSGVVLEDIKGDIELKDVYFRYPARPDVQIFAGFSLFVPSGTTTALVGQSGSGKSTVISLLERFYDPEAGEVLIDGVNLKNLQLRWIREQIGLVSQEPILFTTSIRENIAYGKEGATDEEITTAIKLANAKKFIDKLPQGLDTMAGQNGTQLSGGQKQRIAIARAILKNPRILLLDEATSALDAESERVVQEALDKVMTQRTTVVVAHRLTTIRNADIIAVVHQGKIVEKGAHDELIKDVDGAYSQLIRLQEGEKESQKSEADKSSHILNSQMARSSNQRISLVKSISQRSSGRHSQSNRFSLPHESGVQTEEPNIEEGQFDKKRKNVSIRRLAYLNKPEVPALLLGSVAAIVNGAVFPIFGLVFSSAITMFYEPPEQQRKDARLWSLLYVGLGLVTLVILPLQNYFFGIAGGKLVERIRSLTFAKVVHQEISWFDDPANSSGAVGARLSTDASTVKSLVGDTLALIVQNLSTITAGLVLAFTSNWILAFIVLAVSPVVLVQGIIQMQFLKGFSGDAKVMYEEASQVANDAVSGIRTVASFNAESKVMDMYQKKCSGPEKQGVRLGLVSGAGFGFSFVALYCMSAFCFYIGSVLVQHGKATFQEVFKVFFSLTITAVGISQSSTLAPDTNKAKDSAASIFDILDSNPTIDSSSNEGVTLETVTGDIELQHVSFNYPTRPHIQIFKDLCLSIPAGKTVALVGESGSGKSTVISLLERFYNPDSGHVLLDGVDIKTFRLSWLRQQMGLVGQEPILFNESIRANIAYGKEGATEDEITAAANAANAHNFISSLPNGYDTSVGERGTQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAESERIVQEALDRVSVNRTTVVVAHRLTTIRGADTIAVIKNGVVAEKGRHDVLMKITDGVYASLVALHSSAS* 1255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4404 1254 ProSitePatterns ABC transporters family signature. 1151 1165 IPR017871 GO:0005524
Mal4g4404 1254 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 691 977 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal4g4404 1254 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 14 1251 - -
Mal4g4404 1254 SMART AAA_5 1039 1225 IPR003593 -
Mal4g4404 1254 SMART AAA_5 386 572 IPR003593 -
Mal4g4404 1254 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 38 324 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal4g4404 1254 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 359 595 IPR003439 GO:0005524
Mal4g4404 1254 Pfam ABC transporter 1031 1179 IPR003439 GO:0005524
Mal4g4404 1254 Pfam ABC transporter transmembrane region 691 963 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal4g4404 1254 Pfam ABC transporter transmembrane region 37 309 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal4g4404 1254 MobiDBLite consensus disorder prediction 598 666 - -
Mal4g4404 1254 SUPERFAMILY ABC transporter transmembrane region 672 993 IPR036640 GO:0005524|GO:0016021
Mal4g4404 1254 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 14 1251 IPR039421 -
Mal4g4404 1254 Pfam ABC transporter 380 526 IPR003439 GO:0005524
Mal4g4404 1254 CDD ABC_6TM_Pgp_ABCB1_D1_like 37 319 - -
Mal4g4404 1254 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1001 1248 IPR027417 -
Mal4g4404 1254 MobiDBLite consensus disorder prediction 610 655 - -
Mal4g4404 1254 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 349 597 IPR027417 -
Mal4g4404 1254 Gene3D ABC transporter type 1, transmembrane domain 981 1001 IPR036640 GO:0005524|GO:0016021
Mal4g4404 1254 Gene3D - 1002 1251 IPR027417 -
Mal4g4404 1254 ProSitePatterns ABC transporters family signature. 498 512 IPR017871 GO:0005524
Mal4g4404 1254 Gene3D - 357 610 IPR027417 -
Mal4g4404 1254 SUPERFAMILY ABC transporter transmembrane region 24 343 IPR036640 GO:0005524|GO:0016021
Mal4g4404 1254 CDD ABC_MTABC3_MDL1_MDL2 359 597 - -
Mal4g4404 1254 CDD ABC_6TM_Pgp_ABCB1_D2_like 680 995 - -
Mal4g4404 1254 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1012 1248 IPR003439 GO:0005524
Mal4g4404 1254 CDD ABC_MTABC3_MDL1_MDL2 1012 1247 - -
Mal4g4404 1254 Gene3D ABC transporter type 1, transmembrane domain 86 980 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4404 Mal-Chr4 121821645 121827277 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4404 20 1250 Calmodulin-binding Proteins AT2G36910 46.191 0.0 1090
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4404 K05658 - gmx:100801771 1977.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g4404 4 121821645 121827277 Mal4g4404 4 121821645 121827277 ECH