Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4403 ATGATTACTGGTTTCTTATGTGCCGTAGTTAATGGATTATCTCAGCCTCTCATGGCACTTATATTTGGAAAACTCATCAATACCTTTGGCTCCACCGATCCATCACACATTATCCATGAAGTTTCTAAGGTTGCGTTATTATTTATTTACCTTGGTGTTGGATCTGGAATAGCATCATTTTTACAGGTTACTTGTTGGATGGTGACAGGAGAAAGACAAGCTGCACGGATTCGTGGCTTGTACTTGAAAACCATATTGAAGCAAGACATTTCCTACTTTGACACTGAAGCAACAAGTGGAGAGGTTATTGGGAGAATGTCTGGTGATACCATTCTCATTCAAGATGCCATGGGAGAAAAGGTTGGGAAGTTCATACAACTTAGTTCAACATTTATTGGTGGCTTTGTGATTGCCTTTACAAAAGGATGGGAACTCAGTCTTGTTTTGCTTGCATGCATTCCTTGTATTGTAGTTGTTGGTGGATTTATGTCAATGATGATGGCGAAAATGTCGAGTCGTGGACAAATTGCTTATTCAGAAGCTGGAGTTGTTGTAGAACAAACAGTTGGAGCCATTAGAACAGTTGCCTCTTTTACTGGTGAGGAAAAAGCAACTGAAAAGTACAATAATAAGTTAAGAATTGCTTATAAAAGTACAGTTCAACAAGGGTTAGCCTCAGGGACAGGAATGGGATTATTTTTGCTTATTCTCTTTGGCACTTATGCACTTGCTATGTGGTATGGTTCCAAACTCATCATTGAGAAAGGATATGATGGTGGAAGTGTCTTCAATATTATCATAGCAATTAATACTGGTGGAATGTCCCTTGGTCAAACAACACCATGCCTAAATGCATTTACAACAGGCCAAGTAGCAGCATATAAAATGTTTGAGACAATTAAAAGAAAACCAAAAATTGATGCTTATGACACAAGTGGTGTTGTCTTGGAGAACATAAAGGGAGATATTGAACTCAAAGATGTTTACTTTAGATACCCTGCAAGACCAGATGTGCAGATCTTTGCTGGATTCTCATTCTACATTCCAAGTGGCACAACTGCTGCTTTAGTTGGTCAAAGTGGTAGTGGAAAGTCAACTATAATTAGTTTATTAGAAAGATTCTATGATCCTGAATCTGGAGAAATACTTATTGATGGTGTCAACTTGAAGAATTTTCAAGTTAAATGGATAAGAGAACAGATTGGACTTGTTGGTCAAGAGCCTGTGTTGTTTACTGCTAGTATCAAGGAGAACATTGCTTATGGGAAAGAAGGTGCAACAGATGAGGAAATAGCAACAGCAATAACACTTGCTAATGCTAAAAAATTCATTGATAAACTCCCCCAGGGTCTTGATACTATGGTGGGAGGTCATGGAACTCAACTTTCTGGTGGACAAAAACAAAGAATTGCAATTGCAAGGGCAATATTGAAGAATCCAAGAATCCTTCTTCTTGATGAAGCAACAAGTGCATTGGATGCTGAGTCTGAACGTGTTGTTCAAGAAGCATTGGACAAAGTTATAACACAAAGGACTACTGTAGTTGTTGCACATCGTTTAACAACTATTAGAAATGCTGACATCATAGCAGTGGTTCATCAGGGAAAAATTGTGGAAAAAGGTACTCATGATGAGTTAGTCAAGGATCCTTGTGGTGCTTATTCTCAGCTTATTAGTCTACAAAAAGGAGCCAAGGAAGCAGAAAGAAGCCATAGTTCAGAAGAAGATAAGTCAAGGAACAGTTTCAATTTAGATTCTCAAAGAGCATCCTTTGCAAAATCAATAAGCCAAGGTTCATCAGGAAGTAGACACTCTCTTTCACTTGGCTTAGTTATTCCTTATCAAATTAGTGGACATGAATATGTAGAAGGAACTAATGGTGATGGTGAAAGTAGTGAACTTGATAATGTGAAACGCCAAAAAGTTTCGGTTAAACGTTTGGCAAAGTTGAACAAGCCTGAGGTTCCTGTAATATTACTTGGATCCATAGCTGCAGCAGTACATGGTCTTGTTGTTCCTATATTTGGCCTATTGCTTTCATCTTTTATTAATAGTTTCTATAAACCTGCTGAGCAACTTAGAAAAGATTCTGAGCATTGGGCACTTTTATTTCTTGGTTTGGGATTTATTACCCTTGTGGCTCTACCAGTGCAGAACTACTTATTTGGGATTGCTGGTGGGAAACTTATTGAAAGAATTCGTTCATTGACATTTAAAAAGGTTGTGCATCAAGAAATCAGTTGGTTTGATCATCCTTCAAATTCAAGTGGTGCCGTTAGTGCAAGGTTAGCTACTGATGCTTCAACTGTGAGAACACTTGTTGGTGACACATTGGCCCTCATTGTGCAAAACATAGCAACAGTAACAGCTGGACTAGTTATAGCATTCAGTGCAAATTGGATTCTATCTTTTGTGATTCTGGCTGTGACACCAGTGCTGCTCATACAAGGATACATTCAAATGAAGTTTCTAAAAGGATTCAGTGTAGATGCAAAGGTTGAGGCAAGTCAGGTTGCAAATGACGCTGTTGGTAGCATCAGAACTGTTGCATCATTTTGTGCTGAACAAAAGGTGATGGATATGTACCAGAAAAAATGTTCAGCACCAGAAAAACAAGGTGTTCGGTTGGGACTTGTTAGTGGTGTAGGATTCGGTTTCTCATTTTTTGCTCTAAACTGCACAAATGCTTTCTGTTTCTACATGGGATCAGTTCTCATGCAACACGGCAAAGCAACTTTTGGAGAGATTTTCAAGGTTTTCTTTTCTTTAACATTGACAGCAATAGGTGTTTCTCAGACTAGTGCTTTAGCACCAGATACTAACAAAGCCAAAGATTCTACAGCTTCAATATTTGAAATTCTTGACAGCAAACCTACCATTGACTCAAGTAGTAATGAGGGTGTGACACTAGAAACTGTTAAAGGTGGTATTGAACTTCAACAAGTCAGCTTTAGATACCCAACAAGGCCTAATATTCAAATTTTCAAAGATTTGTGTCTTGCCATCCCTGCTGGAAAGACTGTTGCCTTGGTTGGAGAAAGTGGCAGTGGAAAATCAACAATTATAAGTCTCTTGGAGAGATTTTATAACCCTGATTCTGGACATATATTACTAGATAGAGCGAATATCAAAACTTTCAAATTAAGCTGGTTGAGACAACAAATGGGTTTGGTTGGTCAAGAGCCTATTCTTTTCAACGAAAGCATTCGTGCCAACATAGCTTATGGCAAAGAAGGAAGCACTGCTACAGAAGATGAGATCATTGCAGCAGCTAAAGCAGCAAATGCACACAACTTCATAAGTTCACTTCCAAATGGTTATGAAACATCGGTACGTGAAAGAGGAACACAGTTATCAGGTGGACAAAAGCAACGTATAGCAATTGCAAGAGCTATATTGAAAAATCCTAAAATACTTTTGCTTGATGAGGCAACAAGTGCACTTGATGCTGAGTCAGAACGTGTAGTTCAAGAGGCTTTAGATAGAGTGAGTATGAATAGAACTACTGTTGTGGTGGCTCACCGTCTTGCAACAATTAAAGGTGCTGATATTATAGCTGTAGTGAAAAATGGAGTGATTGCTGAGAAGGGTGGACATGATTTGTTGATGAAGATTGATGGTGGAGTTTATGCTTCATTGGTTGCTCTTCATATTAGTGCATCATAG 3666 0.3852 MITGFLCAVVNGLSQPLMALIFGKLINTFGSTDPSHIIHEVSKVALLFIYLGVGSGIASFLQVTCWMVTGERQAARIRGLYLKTILKQDISYFDTEATSGEVIGRMSGDTILIQDAMGEKVGKFIQLSSTFIGGFVIAFTKGWELSLVLLACIPCIVVVGGFMSMMMAKMSSRGQIAYSEAGVVVEQTVGAIRTVASFTGEEKATEKYNNKLRIAYKSTVQQGLASGTGMGLFLLILFGTYALAMWYGSKLIIEKGYDGGSVFNIIIAINTGGMSLGQTTPCLNAFTTGQVAAYKMFETIKRKPKIDAYDTSGVVLENIKGDIELKDVYFRYPARPDVQIFAGFSFYIPSGTTAALVGQSGSGKSTIISLLERFYDPESGEILIDGVNLKNFQVKWIREQIGLVGQEPVLFTASIKENIAYGKEGATDEEIATAITLANAKKFIDKLPQGLDTMVGGHGTQLSGGQKQRIAIARAILKNPRILLLDEATSALDAESERVVQEALDKVITQRTTVVVAHRLTTIRNADIIAVVHQGKIVEKGTHDELVKDPCGAYSQLISLQKGAKEAERSHSSEEDKSRNSFNLDSQRASFAKSISQGSSGSRHSLSLGLVIPYQISGHEYVEGTNGDGESSELDNVKRQKVSVKRLAKLNKPEVPVILLGSIAAAVHGLVVPIFGLLLSSFINSFYKPAEQLRKDSEHWALLFLGLGFITLVALPVQNYLFGIAGGKLIERIRSLTFKKVVHQEISWFDHPSNSSGAVSARLATDASTVRTLVGDTLALIVQNIATVTAGLVIAFSANWILSFVILAVTPVLLIQGYIQMKFLKGFSVDAKVEASQVANDAVGSIRTVASFCAEQKVMDMYQKKCSAPEKQGVRLGLVSGVGFGFSFFALNCTNAFCFYMGSVLMQHGKATFGEIFKVFFSLTLTAIGVSQTSALAPDTNKAKDSTASIFEILDSKPTIDSSSNEGVTLETVKGGIELQQVSFRYPTRPNIQIFKDLCLAIPAGKTVALVGESGSGKSTIISLLERFYNPDSGHILLDRANIKTFKLSWLRQQMGLVGQEPILFNESIRANIAYGKEGSTATEDEIIAAAKAANAHNFISSLPNGYETSVRERGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESERVVQEALDRVSMNRTTVVVAHRLATIKGADIIAVVKNGVIAEKGGHDLLMKIDGGVYASLVALHISAS* 1222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4403 1221 Gene3D ABC transporter type 1, transmembrane domain 1 579 IPR036640 GO:0005524|GO:0016021
Mal4g4403 1221 SMART AAA_5 350 536 IPR003593 -
Mal4g4403 1221 SMART AAA_5 1004 1198 IPR003593 -
Mal4g4403 1221 MobiDBLite consensus disorder prediction 564 583 - -
Mal4g4403 1221 ProSitePatterns ABC transporters family signature. 462 476 IPR017871 GO:0005524
Mal4g4403 1221 Gene3D ABC transporter type 1, transmembrane domain 945 966 IPR036640 GO:0005524|GO:0016021
Mal4g4403 1221 Gene3D ABC transporter type 1, transmembrane domain 638 944 IPR036640 GO:0005524|GO:0016021
Mal4g4403 1221 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 323 559 IPR003439 GO:0005524
Mal4g4403 1221 SUPERFAMILY ABC transporter transmembrane region 1 304 IPR036640 GO:0005524|GO:0016021
Mal4g4403 1221 CDD ABC_6TM_Pgp_ABCB1_D2_like 648 960 - -
Mal4g4403 1221 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 977 1215 IPR003439 GO:0005524
Mal4g4403 1221 CDD ABC_MTABC3_MDL1_MDL2 977 1214 - -
Mal4g4403 1221 MobiDBLite consensus disorder prediction 564 582 - -
Mal4g4403 1221 CDD ABC_6TM_Pgp_ABCB1_D1_like 1 296 - -
Mal4g4403 1221 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 2 288 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal4g4403 1221 Pfam ABC transporter 996 1146 IPR003439 GO:0005524
Mal4g4403 1221 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 1 1218 - -
Mal4g4403 1221 SUPERFAMILY ABC transporter transmembrane region 641 958 IPR036640 GO:0005524|GO:0016021
Mal4g4403 1221 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 313 561 IPR027417 -
Mal4g4403 1221 CDD ABC_MTABC3_MDL1_MDL2 323 561 - -
Mal4g4403 1221 Pfam ABC transporter 344 490 IPR003439 GO:0005524
Mal4g4403 1221 Gene3D - 967 1216 IPR027417 -
Mal4g4403 1221 Gene3D - 313 562 IPR027417 -
Mal4g4403 1221 ProSitePatterns ABC transporters family signature. 1118 1132 IPR017871 GO:0005524
Mal4g4403 1221 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 1 1218 IPR039421 -
Mal4g4403 1221 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 659 942 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal4g4403 1221 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 966 1215 IPR027417 -
Mal4g4403 1221 Pfam ABC transporter transmembrane region 1 272 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal4g4403 1221 Pfam ABC transporter transmembrane region 659 927 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4403 Mal-Chr4 121787541 121795000 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4403 2 562 Calmodulin-binding Proteins AT2G36910 38.298 1.64e-118 397