Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4402 ATGGAAGAAAACCCTGAGGTACATGATAATTCTTCACCATCTTCTACACAACAAAATGGAATTAGAGATAACAAAGCCAACCAAAAAGTTCCATTCTACATGCTCTTTAATTTTGCTGATCGTCTTGATGTAACGTTGATGATCATTGGCACTATCTCTGCTGTGGCTAATGGATTGGCAAACCCTCTCATGACACTCTTTCTTGGAAATGTCATCAATGCATTTGGCTCCTCTAATCAATCAGACACTATCAAACAAGTTTCTAAGGTATCATTGCTATTTGTTTACCTGGCTATTGGGTCTGGAATAGCATCATTTCTACAGGTAACATGTTGGATGGTGACAGGAGAAAGACAAGCTGCAAGGATTCGTAGTTTGTACTTGAAAACAATATTAAAACAAGATATTGCATTCTTTGACACTGAAACAAACACAGGAGAAGTAATTGGGAGAATGTCTGGTGACACAATCCTCATTCAAGAGGCTATGGGAGAAAAGGTTGGGAAGTTTCTTCAACTTGCTTCAAACTTTTGTGGTGGCTTTGTGATGGCATTTATAAAAGGATGGCGCCTAGCTATAGTTTTACTCGCATGTGTACCTTGTGTTGTCATTGCTGGTGCTTTCATGTCTATGGTGATGGCTAAAATGTCAAGTCGCGGACAAATTGCTTATGCAGAAGCAGGAAATGTTGTTGATCAAACAGTTGGAGCCATCAGAACAGTTGCATCTTTTACTGGTGAGAAAAAAGCCATAGAGAAGTATAACAGCAAGATAAAAATTGCTTATAATAATATGGTTAAACAAGGCATAGTCTCAGGGTTTGGTATCGGAATGCTTACCTTTATTTCCTTCTGCACTTATGGACTTGCCATGTGGTATGGTTCCAAACTAGTCGTCGAGAAAGGATATAATGGTGGAACGATCATGACTGTGATCATAGCTCTTATGACTGGTGGGATAGCACTAGGTCAAACATCCCCAAGCTTACAAGCATTTGCTGCAGGCCAAGCAGCAGCATATAAAATGTTTGAGACAATTAAAAGAAAGCCTAAAATTGATGCTTATGACACAAGTGGTGTTGTCTTGGAAGACATAAAGGGAGATATTGAACTTAAAGATGTTTATTTCAGATATCCTGCAAGACCAGATGTGCAGATCTTTGCTGGATTCTCATTTTTTGTTCCAAGTGGCACAACTACTGCTTTGGTGGGTCAAAGTGGAAGTGGAAAGTCTACTGTAATCAGTTTATTGGAAAGATTCTATGATCCTGAAGCTGGAGAAGTACTTATAGATGGTGTGAATCTGAAGAACTTGCAACTTAGATGGATAAGAGAACAGATTGGGCTGGTTAGTCAAGAACCTATCTTGTTTACCACTACTATCAGAGAGAATGTAGCATATGGGAAAGAAGGTGCAACTGATGAAGAGATAACAACAGCTATAACACTTGCTAATGCCAAAAATTTCATTGACAAGCTGCCTCAGGTGTGTGTAAATATTGTAGACTTTTATACCTCTGATTCTTGTTTTTGGATTGTAGTTTATAATAATGTGGTATTGTGTTTGCAGGGCCTTGACACCATGGCAGGGCAAAATGGTACTCAACTTTCGGGTGGGCAAAAGCAAAGAATTGCAATTGCAAGAGCAATATTGAAGAACCCCAAAATCCTTCTTCTTGATGAAGCAACAAGTGCATTGGATGCTGAATCTGAACATATTGTTCAAGAAGCATTAGAAAAAATTATATTGAAAAGGACTACTGTTGTCGTTGCGCATCGTTTGACAACTATCAGAAATGCTGACACAATAGCCGTGGTTCAACAGGGGAAAATCGTGGAGAGAGGAACTCATAGCGAGTTAACCATGGATCCTGACGGTGCTTATTCTCAACTTTTTCGTCTACAAGAAGGAGACAATGAAGCTGAATGTAGCAGAAAGTCTGAAGCAGATAAGTTCGGTGACAATTTAAATATAGATAGTCACATGGCTACATCTTCGACTCAGAGAACTTCCTTTGTGAGATCAATAAGCCAAACTTCATCAGTGAGTCATCTAAATTCCAAGTCATTTAGAGGCTTGTCTGAAGAAATAGTAGAAGCAGATACTGAACAAGGTCAACTCGATGACAAGAAAAAACCCAAAACGGTATCTATATGGCGTTTGGCCAAGTTGAACAAGCCGGGGATTCCTGTCATACTGCTTGGAACCATTGCCGCAATAGTAAATGGTGTCGTGTTCCCTATATTTGGCTTCTTGTTTTCAGCAGTCATTAGTATGTTTTATAAACCTCCAGAACAGCAGAGGAAAGAGTCCAGGTTCTGGTCACTTCTATTTGTGGGTTTGGGTTTGGTTACTGTAGTGGTTTTACCACTGCAAAATTTCTTCTTTGGAATTGCTGGTGGTAAACTTATTGAAAGAATTCGTTCATTGACATTTGAAAAGATTGTGCACCAAGAAATTAGATGGTTTGATGATCCTTCACATTCAAGTGGTGCGGTTGGTGCAAGGTTATCTATTGACGCTTCAACTGTGAAAAGTCTTGTTGGTGACACATTGGCCCTCATTGTGCAGAACATATCAACAGTCACAGCTGGTCTAGTTATAGCATTCACTGCTAATTGGATTCTCGCTTTTATAGTTTTGGCTGTGTCACCTATGATTCTTATGCAAGGAATCGTTCAAATGAAGTTTCTTAAAGGATTCAGTGCCGATGCCAAGGTTATGTATGAAGAGGCAAGTCAAGTGGCAAATGATGCTGTTAGTAGCATCAGAACTGTTGCATCATTTTGTGCAGAATCAAAGGTGATGGACATGTACAGGAAAAAATGTTTAGGTCCAGCGAAACAAGGTGTTCGCTTGGGGCTTGTTAGTGGTGTAGGATTTGGAATCTCTTTTTTAGCTCTATATTGCACAAATGCTTTCACTTTTTACATAGGATCTGTTTTAGTGCAACACGGGAAAGCAACTTTTACAGAAGTTTTCAGGGTTTTCTTTGCTTTAACAATGACTGCAATCGCCGTTTCCCAGACGACTACATTGGCACCAGACACTAACAAGGCCAAAGATTCCGCAGCTTCAATATTTGATATTCTTGACAGCAAACCTGATATTGACTCCAGCAGCAATGCGGGTGTAACACGAGAAACTGTAGTTGGTGATATTGAAATTCAACATGTCAACTTTAATTACCCAACAAGGCCCGACATTCAAATTTTCAAAGATTTAAGCCTAAGCATCCCATCTTCAAAGACTATTGCCTTGGTTGGAGAAAGTGGCAGTGGAAAGTCAACAGTTATCAGCCTCTTAGAGAGATTTTACGACCCTAATTCTGGACGTATATTACTAGATGGAGTCGATATCAAAACTTTCAGATTAAGTTGGTTGAGGCAACAAATGGGTTTGGTTGGTCAAGAGCCTATTCTTTTCAACGAAAGCATTCGTGCCAACATAGCTTATGGCAAAGAAGGAGATGCTTCGGAGGATGAGATAATTGCAGCAGCTAATGCAGCCAATGCACACAGCTTCATAAGTTCTCTTCCAGATGGTTATGACACCTCTGTTGGTGAGAGAGGCACACAACTGTCTGGAGGACAGAAGCAGCGCATTGCTATTGCAAGAGCCATGCTGAAAAACCCAAAAATACTTTTGCTTGATGAGGCAACAAGTGCACTTGATGCTGAGTCGGAGCGTATAGTTCAAGAGGCTCTAGATAGAGTGAGTGTGAACAGAACTACTGTGGTGGTGGCTCACCGTCTTACAACAATTCGAGGGGCTGATACTATAGCCCTAATTAAAAATGGGGTGGTTGCTGAAAAGGGAAGACATGATGACTTGATGAGGATTACTGATGGTGTTTATGCTTCATTAGTAACTCTTCATTCAAGTGCATCATAA 3894 0.4006 MEENPEVHDNSSPSSTQQNGIRDNKANQKVPFYMLFNFADRLDVTLMIIGTISAVANGLANPLMTLFLGNVINAFGSSNQSDTIKQVSKVSLLFVYLAIGSGIASFLQVTCWMVTGERQAARIRSLYLKTILKQDIAFFDTETNTGEVIGRMSGDTILIQEAMGEKVGKFLQLASNFCGGFVMAFIKGWRLAIVLLACVPCVVIAGAFMSMVMAKMSSRGQIAYAEAGNVVDQTVGAIRTVASFTGEKKAIEKYNSKIKIAYNNMVKQGIVSGFGIGMLTFISFCTYGLAMWYGSKLVVEKGYNGGTIMTVIIALMTGGIALGQTSPSLQAFAAGQAAAYKMFETIKRKPKIDAYDTSGVVLEDIKGDIELKDVYFRYPARPDVQIFAGFSFFVPSGTTTALVGQSGSGKSTVISLLERFYDPEAGEVLIDGVNLKNLQLRWIREQIGLVSQEPILFTTTIRENVAYGKEGATDEEITTAITLANAKNFIDKLPQVCVNIVDFYTSDSCFWIVVYNNVVLCLQGLDTMAGQNGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESEHIVQEALEKIILKRTTVVVAHRLTTIRNADTIAVVQQGKIVERGTHSELTMDPDGAYSQLFRLQEGDNEAECSRKSEADKFGDNLNIDSHMATSSTQRTSFVRSISQTSSVSHLNSKSFRGLSEEIVEADTEQGQLDDKKKPKTVSIWRLAKLNKPGIPVILLGTIAAIVNGVVFPIFGFLFSAVISMFYKPPEQQRKESRFWSLLFVGLGLVTVVVLPLQNFFFGIAGGKLIERIRSLTFEKIVHQEIRWFDDPSHSSGAVGARLSIDASTVKSLVGDTLALIVQNISTVTAGLVIAFTANWILAFIVLAVSPMILMQGIVQMKFLKGFSADAKVMYEEASQVANDAVSSIRTVASFCAESKVMDMYRKKCLGPAKQGVRLGLVSGVGFGISFLALYCTNAFTFYIGSVLVQHGKATFTEVFRVFFALTMTAIAVSQTTTLAPDTNKAKDSAASIFDILDSKPDIDSSSNAGVTRETVVGDIEIQHVNFNYPTRPDIQIFKDLSLSIPSSKTIALVGESGSGKSTVISLLERFYDPNSGRILLDGVDIKTFRLSWLRQQMGLVGQEPILFNESIRANIAYGKEGDASEDEIIAAANAANAHSFISSLPDGYDTSVGERGTQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAESERIVQEALDRVSVNRTTVVVAHRLTTIRGADTIALIKNGVVAEKGRHDDLMRITDGVYASLVTLHSSAS* 1298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4402 1297 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1046 1291 IPR027417 -
Mal4g4402 1297 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 359 635 IPR027417 -
Mal4g4402 1297 MobiDBLite consensus disorder prediction 8 22 - -
Mal4g4402 1297 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 733 1019 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal4g4402 1297 CDD ABC_MTABC3_MDL1_MDL2 1054 1292 - -
Mal4g4402 1297 ProSitePatterns ABC transporters family signature. 1194 1208 IPR017871 GO:0005524
Mal4g4402 1297 Gene3D ABC transporter type 1, transmembrane domain 712 1021 IPR036640 GO:0005524|GO:0016021
Mal4g4402 1297 Gene3D ABC transporter type 1, transmembrane domain 1022 1043 IPR036640 GO:0005524|GO:0016021
Mal4g4402 1297 Gene3D ABC transporter type 1, transmembrane domain 34 358 IPR036640 GO:0005524|GO:0016021
Mal4g4402 1297 CDD ABC_MTABC3_MDL1_MDL2 369 635 - -
Mal4g4402 1297 Pfam ABC transporter 390 564 IPR003439 GO:0005524
Mal4g4402 1297 MobiDBLite consensus disorder prediction 1 22 - -
Mal4g4402 1297 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 369 633 IPR003439 GO:0005524
Mal4g4402 1297 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 25 501 IPR039421 -
Mal4g4402 1297 Pfam ABC transporter 1073 1222 IPR003439 GO:0005524
Mal4g4402 1297 SMART AAA_5 396 610 IPR003593 -
Mal4g4402 1297 SMART AAA_5 1081 1268 IPR003593 -
Mal4g4402 1297 Gene3D - 513 614 IPR027417 -
Mal4g4402 1297 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1054 1291 IPR003439 GO:0005524
Mal4g4402 1297 CDD ABC_6TM_Pgp_ABCB1_D2_like 722 1037 - -
Mal4g4402 1297 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 48 334 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal4g4402 1297 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 523 1294 - -
Mal4g4402 1297 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 25 501 - -
Mal4g4402 1297 SUPERFAMILY ABC transporter transmembrane region 35 353 IPR036640 GO:0005524|GO:0016021
Mal4g4402 1297 CDD ABC_6TM_Pgp_ABCB1_D1_like 47 329 - -
Mal4g4402 1297 Gene3D - 359 495 IPR027417 -
Mal4g4402 1297 Gene3D - 695 711 IPR027417 -
Mal4g4402 1297 Gene3D - 1044 1294 IPR027417 -
Mal4g4402 1297 ProSitePatterns ABC transporters family signature. 536 550 IPR017871 GO:0005524
Mal4g4402 1297 Pfam ABC transporter transmembrane region 733 1004 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal4g4402 1297 Pfam ABC transporter transmembrane region 47 318 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal4g4402 1297 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 523 1294 IPR039421 -
Mal4g4402 1297 SUPERFAMILY ABC transporter transmembrane region 711 1036 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4402 Mal-Chr4 121780484 121786628 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4402 734 1296 Calmodulin-binding Proteins AT2G36910 42.681 1.20e-134 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4402 K05658 - gmx:100801771 1887.46