Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4391 ATGAGACTCTCTTCAGCTGGTTTTAGTCCTCCACCCCAAGAAGGGGAAAAGCGAGTTCTAGATTCAGAACTTTGGCATGCATGTGCTGGCCCTCTTGTCTCTTTGCCTGCAGTTGGAAGTAGAGTTGTGTACTTTCCACAAGGTCACAGTGAACAAGTGGCTGTGTCAACCAACAAGGAAGTGGATGCTCATATCCCAAACTATCCAAGCTTACCTCCACAACTTATTTGTCAACTTCATAATTTGACTATGCATGCTGATGTGGAGACCGATGAAGTGTATGCGCAGATGACCTTGCAACCTCTGAATGCTCAAGAGCAAAAAGAGGCTTACCTTCCAGCAGAGTTGGGAACTCCCAGTAAACAGCCGACAAACTACTTTTGCAAGACCTTGACTGCTAGCGACACAAGCACTCACGGGGGATTCTCTGTGCCTCGCCGGGCGGCTGAAAAAGTGTTTCCTCCTTTGGATTTTTCCCAGCAGCCTCCTGCTCAAGAGTTACTAGCAAAGGATTTGCACGGTAACGAATGGAAATTCAGACATATCTTCCGAGGCCAGCCCAAAAGGCATCTACTTACAACTGGATGGAGTGTTTTTGTGAGTGCTAAAAGACTTGTTGCTGGTGATTCTGTGCTGTTTATCTGGAATGAGAAGAACCAATTGCTTCTTGGTATCCGCCGTGCTAGCCGACCACAAACTGTGATGCCTTCCTCAGTATTGTCAAGTGATAGTATGCACTTGGGACTTCTTGCTGCAGCAGCTCATGCGGCTGCAACCAATAGCCGTTTCACTATTTTCTATAACCCACGCGCGTGTCCATCAGAATTTGTCATACCCTTAACGAAGTATGTTAAAGCAGTGTATCATACTCGAGTTTCAGTAGGTATGCGTTTCAGGATGCTCTTTGAAACAGAGGAGTCTAGTGTGCGGCGATACATGGGTACAATAACTGGCATTTGTGACCTGGATTCTGTCCGGTGGCCGAACTCACATTGGCGCTCCGTTAAGGTTGGTTGGGATGAATCAACTGCTGGAGAAAGGCAACCTAGAGTGTCTTTGTGGGAAATTGAGCCATTAACAACATTTCCTATGTATCCATCACCATTCCCTCTTAGGCTTAAACGACCATGGCCTCCTGGACTGCCTTCATTCCATGGCATGAAAGATGATGATTTTGGCATGAATTCTCCTCTGTTGTGGCTCCGAGACACCGATAGAGGGCTTCAATCTCTTAATTATCAAGGGATTGGGGTTAATCCTTGGATGCAGCCAAGGTTTGATCCCTCCATGCTGAATATGCAAACCGATATGTATCAAGCTGTGGCTGCTGCTGCACTTCAGGACATGAGGACTGTAGTAGATCCTTCCAAACAGCATCCTGGTTCCTTACTTCAATTTCAGCAACCGCCGAACTTCCCGAACAGGACCGCTGCTTTAATGCAGGCACAGATGTTGCAACAGTCACAACCTCAACAGGCTTTTCAAAATAATAATCGAGAGAATCAAAATATGTCGCAATCTCAGCCACAAGCTCAGGCTCGTCCTCAACAGCATCTACAGCATCAGCACTCATTCGATAATCAGCTCCATCATCATAACCAGCAGCAACAACAAACTCAACAGCAAGTGGTGGATAATAATCAGCAGATTTCTGGTTTGGTCTCTACAATGTCTCAGTTTGTTTCAGCGCCTCAAACTCAATCACCACCTATGCAAGCTCTCTCTTCACTATGCCATCAGCAGAGTTTTTCTGATTCAAATGTGAACTCTTCAACTACTGTTGTTTCTCCTTTGCACAGTATCATGGGTTCATCGTTTCCGCAGGATGAAACATCCCACCTTCTGAGTCTTCCAAGAACAAGCTCTTGGGTTCCTGTTCAAAATTCAACTGGTTGGCCCTCCAAGCGCGTTGCGGTGGATCCACTCCTCTCTTCGGGAGCATCTCAATGTATTCTGCCTCAGGTAGAGCAGTTAGGACAGCCGCAGAATTCGATATCTCAAAATGCTATTACACTGCCACCGTTTCCTGGTAGGGAGTGCTCAATAGACCAAGAAGGGAGCAATGATCCGCAAAGTAACCTTTTATTCGGTGTCAATATAGATCCCTCGTCTCTTCTAATGCATAATGGGATGTCAAACTTTAAGGGGATCAGTGGCAACAACAATGACTCCTCAACCATGTCCTATCATCAATCTTCTAATTACATGAACACTGCAGGCGCAGATTCTTCGTTGAATCATGGAGTAACGCCTAGTATTGGTGAATCTAGTTTCTTGCATACCCCGGAAAATGGGGAGCAAGGAAACAACCCACTGAACAAGACCTTTGTGAAGGTTTATAAATCAGGGTCCTTCGGAAGATCGTTGGATATCACTAAATTCAGCAGCTACAATGAGCTGCGTAGTGAGCTCGCCCAAATGTTCGGACTAGAAGGTGAGTTGGAGGACCCTGTGAGATCAGGCTGGCAGCTTGTATTCGTTGACCGAGAGAATGATGTTCTTCTCCTCGGTGATGGCCCTTGGCCGGAATTCGTGAGTAGTGTATGGTGCATCAAGATACTTTCGCCCGAGGAAGTGCAGCAAATGGGCAACACTGGCCTCGGGCTTTTGAACTCGGTTCCAATTCAAAGGCTCTCAAATAGCATTTGTGACGACTACGTGAGCCGTCAAGATTCAAGAAATCTGAGCAGCGGGATAACAACCGTGGGATCTCTAGACTACTAA 2724 0.4637 MRLSSAGFSPPPQEGEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNKEVDAHIPNYPSLPPQLICQLHNLTMHADVETDEVYAQMTLQPLNAQEQKEAYLPAELGTPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELLAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRACPSEFVIPLTKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGICDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPPGLPSFHGMKDDDFGMNSPLLWLRDTDRGLQSLNYQGIGVNPWMQPRFDPSMLNMQTDMYQAVAAAALQDMRTVVDPSKQHPGSLLQFQQPPNFPNRTAALMQAQMLQQSQPQQAFQNNNRENQNMSQSQPQAQARPQQHLQHQHSFDNQLHHHNQQQQQTQQQVVDNNQQISGLVSTMSQFVSAPQTQSPPMQALSSLCHQQSFSDSNVNSSTTVVSPLHSIMGSSFPQDETSHLLSLPRTSSWVPVQNSTGWPSKRVAVDPLLSSGASQCILPQVEQLGQPQNSISQNAITLPPFPGRECSIDQEGSNDPQSNLLFGVNIDPSSLLMHNGMSNFKGISGNNNDSSTMSYHQSSNYMNTAGADSSLNHGVTPSIGESSFLHTPENGEQGNNPLNKTFVKVYKSGSFGRSLDITKFSSYNELRSELAQMFGLEGELEDPVRSGWQLVFVDRENDVLLLGDGPWPEFVSSVWCIKILSPEEVQQMGNTGLGLLNSVPIQRLSNSICDDYVSRQDSRNLSSGITTVGSLDY* 908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4391 907 SMART B3_2 127 229 IPR003340 GO:0003677
Mal4g4391 907 Pfam AUX/IAA family 764 859 IPR033389 -
Mal4g4391 907 MobiDBLite consensus disorder prediction 499 523 - -
Mal4g4391 907 SUPERFAMILY CAD & PB1 domains 771 849 - -
Mal4g4391 907 ProSiteProfiles B3 DNA-binding domain profile. 127 229 IPR003340 GO:0003677
Mal4g4391 907 Gene3D - 771 863 - -
Mal4g4391 907 Gene3D - 125 228 IPR015300 -
Mal4g4391 907 Gene3D - 291 363 - -
Mal4g4391 907 Pfam B3 DNA binding domain 127 228 IPR003340 GO:0003677
Mal4g4391 907 MobiDBLite consensus disorder prediction 454 473 - -
Mal4g4391 907 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 887 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mal4g4391 907 MobiDBLite consensus disorder prediction 458 473 - -
Mal4g4391 907 ProSiteProfiles PB1 domain profile. 774 858 IPR000270 GO:0005515
Mal4g4391 907 CDD B3_DNA 126 227 IPR003340 GO:0003677
Mal4g4391 907 PANTHER AUXIN RESPONSE FACTOR 1 887 - -
Mal4g4391 907 Pfam Auxin response factor 253 336 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mal4g4391 907 SUPERFAMILY DNA-binding pseudobarrel domain 112 256 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4391 Mal-Chr4 121662023 121667211 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4391 1 484 B3 DNA Binding Superfamily AT1G30330 86.708 0.0 856
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mal4g4391 AUX_IAA 1.5e-07 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4391 - - gmx:100796447 1523.45