Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4354 ATGAGGAGAAATTGCAACTTGGAACTCTGCCTTTTTCCTCCATACAATTCTGGCAACAATCACCCCATGGTGGAAGAAGAAGATAGTAATGAGAGCCCAATGCAAAATCAGCAACAACCGCTCACCATTTTCTATGATGGCAAGATGTGTGTTACTGATGTCACAGAGTTTCAGGCTAAATCCATCTTAATGCTGGCAAATAAAATTAAGGTGCAAGAAAAAGTGAGGACACCAATAGGGTCAGAGCCATCAACACCAACAATAATGCAATCTCCTCATCAATTATATAGCCCTGGAACTGGTCTTTCCATGAAAAGATCTTTGCAACGGTTTTTACAAAAGAGAAAGAATAGGGTCCAAGAAGCATCACCATACCATCACTAG 384 0.4062 MRRNCNLELCLFPPYNSGNNHPMVEEEDSNESPMQNQQQPLTIFYDGKMCVTDVTEFQAKSILMLANKIKVQEKVRTPIGSEPSTPTIMQSPHQLYSPGTGLSMKRSLQRFLQKRKNRVQEASPYHH* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4354 127 ProSiteProfiles Tify domain profile. 34 68 IPR010399 -
Mal4g4354 127 Pfam tify domain 37 67 IPR010399 -
Mal4g4354 127 Pfam Jas motif 105 125 IPR018467 -
Mal4g4354 127 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 1 127 IPR040390 -
Mal4g4354 127 PANTHER - 1 127 - -
Mal4g4354 127 SMART tify_2 34 68 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4354 Mal-Chr4 121213509 121216748 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4354 1 126 Tify Gene Family AT1G30135 44.275 1.61e-23 86.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Mal4g4354 tify 3.1e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4354 - - gmx:100803886 186.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g4354 4 121213509 121216748 Mal4g4354 4 121213509 121216748 ECH