Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4326 ATGTTCTGCGTTCCCTCTCAACTTGTCAAGGATGTTAACAAATTGAAGAATCGTCTTGATTCGTCGAAGAGAAAGGTTAGGGAGCCAAAGGAAGAGACCGTGACATTGGGTCCAGCTGTTAAGGATGGTGAACATGTTTTCGGTGTTGCTCGCATTTTTGCTTCCTTCAACGACACCTTCATTCATGTGACTGATTTGTCTGGCAGGGAAACCCTTGTTCGTATCACTGGTGGGATGAAGGTTAAGGCTGACAGAGACGAGTCATCTCCCTATGCTGCTATGCTTGCAGCTCAGGATGTTGCTACTAGATGCAAGGAACTTGGTATTACCGCACTTCACATCAAGCTCCGTGCCACTGGTGGAAACAAGACCAAAACACCTGGTCCAGGTGCTCAGGCTGCTCTTCGTGCCCTTGCTCGGTCTGGAATGAAGATTGGCCGTATAGAGGATGTCACTCCCATTCCTTCCGATAGCACCCGTAGAAAGAGTGGTAGAAGGGGTAGAAGGCTTTAG 513 0.4854 MFCVPSQLVKDVNKLKNRLDSSKRKVREPKEETVTLGPAVKDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVATRCKELGITALHIKLRATGGNKTKTPGPGAQAALRALARSGMKIGRIEDVTPIPSDSTRRKSGRRGRRL* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4326 170 Hamap 30S ribosomal protein S11 [rpsK]. 16 167 IPR001971 GO:0003735|GO:0005840|GO:0006412
Mal4g4326 170 SUPERFAMILY Translational machinery components 43 168 - -
Mal4g4326 170 PANTHER BNAA05G27530D PROTEIN 13 170 - -
Mal4g4326 170 Pfam Ribosomal protein S11 48 166 IPR001971 GO:0003735|GO:0005840|GO:0006412
Mal4g4326 170 ProSitePatterns Ribosomal protein S11 signature. 135 157 IPR018102 -
Mal4g4326 170 PANTHER 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 13 170 IPR001971 GO:0003735|GO:0005840|GO:0006412
Mal4g4326 170 Coils Coil 12 32 - -
Mal4g4326 170 PIRSF RPS11p_RPS11a_RPS14e_RPS11o 14 167 IPR001971 GO:0003735|GO:0005840|GO:0006412
Mal4g4326 170 Gene3D Ribosomal protein S11 21 170 IPR036967 GO:0003735|GO:0005840|GO:0006412
Mal4g4326 170 MobiDBLite consensus disorder prediction 149 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4326 Mal-Chr4 120721136 120724824 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4326 22 159 Cytoplasmic Ribosomal Protein Gene Family AT3G11510 89.855 2.96e-90 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4326 K02955 K01000 gmx:100787077 258.84