Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4325 ATGTGGCTCCGCCCCTGCACGGATCCCGAGTACAACTTGTATGAGACCTTCGATAATGAGCCTACTCACATATTAGACACATTTCTAAATCGCATGAGAGATTGTGCTAAAGAAATGGTTGCATCCAACATTGAAGGACGTGACACATTGGAGATGAATGTGCCGTTTCATGTTAACTCGCACATCGAAGAAGAACATCCTTTTGAGCAATATCCTCATAATTATAACGATCCAAAAAATGTGGATTTGCGAGAGAAACTAGAATATGATGATTTTCTAGATGAATTGGAAGAAGATCATTTTAAGTTGTATCCTGAGAATTATAACAATCAACAAACTGTGGATTTGCTAGAGGAATTGGAAGATGATTCTATTTTAAAATTCATATTTGTTCCACATTTCCATCAGTATCAGGTTGTTGGGAGAGCTCTCCCTACGGAAACAGATCAACACCCGAAGATTTATCGGATGAAGCTTTGGGCCACCAATGAAGTTCGTGCCAAGTCCAAGTTCTGGTATTTTTTGAGGAAGCTGAAGAAGGTGAAGAAGAGCAATGGTCAAGTCCTTGCTATCAATGAGATCTTTGAGAAGAACCCAACAAAGATCAAGAACTACGGTATTTGGTTGAGGTACCAGAGTAGAACAGGCTACCACAACATGTACAAGGAGTTCCGTGACACCACTCTAAATGGTGCAGTTGATCTGATGTACAATGAGATGGCTTCACGCCACAGGGTTCGTTTCCCCTGCATTCAGATTATCAAGACTGCCACCATCCCAGCCAAGCTCTGCAAGAGGGAGAGCACCAAACAATTCCACAACTCCAAGATCAAGTTCCCATTGGTTTTCAAGAAAATCAGACCACCATCCAGGACTCTGAAGACCACATACAAGGCCAAGAAGCCCAACTTGTTTATGTAA 921 0.418 MWLRPCTDPEYNLYETFDNEPTHILDTFLNRMRDCAKEMVASNIEGRDTLEMNVPFHVNSHIEEEHPFEQYPHNYNDPKNVDLREKLEYDDFLDELEEDHFKLYPENYNNQQTVDLLEELEDDSILKFIFVPHFHQYQVVGRALPTETDQHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEFRDTTLNGAVDLMYNEMASRHRVRFPCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFKKIRPPSRTLKTTYKAKKPNLFM* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4325 306 SUPERFAMILY RplX-like 199 274 - -
Mal4g4325 306 Hamap 50S ribosomal protein L18Ae [rpl18a]. 134 197 IPR028877 -
Mal4g4325 306 Gene3D - 127 199 - -
Mal4g4325 306 PANTHER 60S RIBOSOMAL PROTEIN L18A 133 265 - -
Mal4g4325 306 Pfam Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A 135 256 IPR023573 GO:0003735|GO:0005840|GO:0006412
Mal4g4325 306 Gene3D - 200 275 - -
Mal4g4325 306 PANTHER 60S RIBOSOMAL PROTEIN L18A 266 306 IPR028877 -
Mal4g4325 306 PANTHER 60S RIBOSOMAL PROTEIN L18A 266 306 - -
Mal4g4325 306 PANTHER 60S RIBOSOMAL PROTEIN L18A 133 265 IPR028877 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4325 Mal-Chr4 120714509 120720325 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4325 133 306 Cytoplasmic Ribosomal Protein Gene Family AT2G34480 90.230 1.82e-117 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4325 K02882 K22683 jre:108990266 346.665