Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4323 ATGTCAACCTCTAGAACCTCAAACAATTCCCTTAAAGGACATAATCATCATCACAATCAAATGCAAATAAATTTATCTCTTCTTCAACGAAACACATCGGTTTGTGGCGAAAAAAGAGGAAGAAAAAAGCAAACAGAACCAGGTAAGTTTCTTGGTGTAAGGAGAAGACCTTGGGGTAGATATGCAGCTGAAATTAGAGATCCTGCTACTAAAGAAAGACATTGGTTAGGAACATTTGATACTGCTCAAGAAGCTGCTTTTGCTTATGATAGAGCTGCTCTTTCCATCAAAGGTAGCAATGCTAGAACAAATTTCATATATCCTTCTTCTTCCGACGACGATGATGCTAATTTTAACAATGTTGTTGATACTCCTTTGGATGTTCAAAAAACACAACCAATTACCAATCAAAATAGTCTCTCTCAGCTTGATACTAATTCACATTCCAACATTGAAAAACAAAATTATTCTCATTTGAACAATGACAATTTTTTATTCTCTAATGATTATAATAACTCAGGCTATCTTGAAAGCATTGTTCCTGTTAGTTGCTTCAAATCTATTTCCAACACCAATAATTCAAACTTTGATCATAAGAGTAATGCAAGTGATTCAAGTGAACACCAAAATGTTTCAAACTTCATGCAGGGTCAATCATTTTTTGACTACACTCCATTCTCTCAAGGAGCATTAAACATGGACACAAGTGAAACCAGTGAAGGATTATGGGATAGCAATTACAATGAACTTTCAGCTATTTTTAACAAACCACTAAGGCATGAAAGTCCAAGCTATGGACTAATGACAACTCAGGATGTTTCTTCAACGACCTATTCTTCTTTCGGCGATGTTGACATGGGATACTCCCTCTTCTGA 876 0.355 MSTSRTSNNSLKGHNHHHNQMQINLSLLQRNTSVCGEKRGRKKQTEPGKFLGVRRRPWGRYAAEIRDPATKERHWLGTFDTAQEAAFAYDRAALSIKGSNARTNFIYPSSSDDDDANFNNVVDTPLDVQKTQPITNQNSLSQLDTNSHSNIEKQNYSHLNNDNFLFSNDYNNSGYLESIVPVSCFKSISNTNNSNFDHKSNASDSSEHQNVSNFMQGQSFFDYTPFSQGALNMDTSETSEGLWDSNYNELSAIFNKPLRHESPSYGLMTTQDVSSTTYSSFGDVDMGYSLF* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4323 291 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 1 291 - -
Mal4g4323 291 SUPERFAMILY DNA-binding domain 49 106 IPR016177 GO:0003677
Mal4g4323 291 Pfam AP2 domain 50 98 IPR001471 GO:0003700|GO:0006355
Mal4g4323 291 PRINTS Ethylene responsive element binding protein signature 50 61 IPR001471 GO:0003700|GO:0006355
Mal4g4323 291 PRINTS Ethylene responsive element binding protein signature 72 88 IPR001471 GO:0003700|GO:0006355
Mal4g4323 291 CDD AP2 49 105 IPR001471 GO:0003700|GO:0006355
Mal4g4323 291 ProSiteProfiles AP2/ERF domain profile. 49 106 IPR001471 GO:0003700|GO:0006355
Mal4g4323 291 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 1 291 - -
Mal4g4323 291 Gene3D AP2/ERF domain 49 107 IPR036955 GO:0003700|GO:0006355
Mal4g4323 291 SMART rav1_2 49 112 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4323 Mal-Chr4 120700909 120701784 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4323 1 284 AP2-EREBP Transcription Factor Family AT5G18560 34.000 2.19e-45 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal4g4323 AP2 7e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4323 - - mtr:MTR_2g019750 479.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4791 5 121114936 121115970 Mal4g4323 4 120700909 120701784 PCT