Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4319 ATGGTGACTTCAATCACACCATGCTTCTCTCCGATTGCTATATCTTGCTCCAACACACGTAACCGTCGCTACTGTGTACCCACCCGCACCAAATCCAAACCTCCCCCAAACCTTAAACTCAACAACCACAAGTCCTCACCGGAACCGCCACTCCTCTCCGCCGGCGATGCCACCCTCAGAGAGGACTTTTCTTCTTCCCAAAATCACGCTTTCACAGTGAACTACCTCATTCAAAATCTCGATTTCTCTCCACAAACTGCTTCTAAACTCTCCAACAAACTTCATTTCAAAGACTCTCAAAAACCCGATTCAGTCCTCTCATTATTCAAATCCTATGGCTTCTCAAATTCCCAATTATCAACTATCTTCAAAACCTACCCTAATCTTCTCTCTTTTGATCCCAACAAAACCATTCTCCCTAAATTCAATTTCCTTCTCTCAAAGGGTGCTTCTAATTCAGACCTTGTCCAAATCATTACCAAAAATCCTCTTATCTTGTCTCAAAGCTTGGAAAAAACCATTACCCCATCTTATGATTTTGTTAAAAGTTTCTTACTTTCTGATGAATCTACCATCGTCTCTCTCAAAAATTGTGCTTGTTTGCTTTTTTCTAAAACCCCATCTCAGAATATTCAAATCCTGCTTCAAAATGGGGTCCCTCACTCTAAAGTTGTTATTTTCTTTCGAAATTGGTATTCCATGCTCATTCAGAAACCTCCAATATTTGAGAAGGTAGTGCTGGAACTAAAGGAATTGGGATTCAACCCCAAAACAACCGTTTTCATTGTCGCATTGCGTGCTAGGATGATGAAACCCGTATGGGAAAGGAATATTAAGGTGTATAAGAAATGGGGTTGGTCTGAAGAAACTATTGTCTCAGCATTTTTGAGGTATCCATGGTGTATGTTGGCATCTGTGGATAAAATTGAGGCAGTGATGCAGTTTTTTGTTAATCACATGGGTTGGGAGTCTCTAGTGCTTGCCAAATATCCAATACTTCTTATGCTGAGTTTGGAGAAAAGGGTTATTCCTAGAGCTTTTGTCTTGAAATTTCTTGAATCCAAAGGTTTGTTTAAGGATGCTAAATTGGCTACACCTTTCAAAGTATCCGAGGATGCGTTTTTGAAGAGATTTGTGACTTGCTTTGAGGAGGAAGCTTCCCAGCTGTTGAAGTTGTATGAAGAGAAAAAAGATGTTTCAAATAAGGTTTTGAAAAAAGGTTTCGAAGATAGCACTGATATGCAAGTGGCGTCTAATGTATGTGTCATTTCTGAGGTTTGA 1281 0.3981 MVTSITPCFSPIAISCSNTRNRRYCVPTRTKSKPPPNLKLNNHKSSPEPPLLSAGDATLREDFSSSQNHAFTVNYLIQNLDFSPQTASKLSNKLHFKDSQKPDSVLSLFKSYGFSNSQLSTIFKTYPNLLSFDPNKTILPKFNFLLSKGASNSDLVQIITKNPLILSQSLEKTITPSYDFVKSFLLSDESTIVSLKNCACLLFSKTPSQNIQILLQNGVPHSKVVIFFRNWYSMLIQKPPIFEKVVLELKELGFNPKTTVFIVALRARMMKPVWERNIKVYKKWGWSEETIVSAFLRYPWCMLASVDKIEAVMQFFVNHMGWESLVLAKYPILLMLSLEKRVIPRAFVLKFLESKGLFKDAKLATPFKVSEDAFLKRFVTCFEEEASQLLKLYEEKKDVSNKVLKKGFEDSTDMQVASNVCVISEV* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4319 426 SMART mt_12 156 187 IPR003690 GO:0003690|GO:0006355
Mal4g4319 426 SMART mt_12 120 151 IPR003690 GO:0003690|GO:0006355
Mal4g4319 426 SMART mt_12 292 323 IPR003690 GO:0003690|GO:0006355
Mal4g4319 426 SMART mt_12 324 358 IPR003690 GO:0003690|GO:0006355
Mal4g4319 426 Pfam mTERF 208 374 IPR003690 GO:0003690|GO:0006355
Mal4g4319 426 Pfam mTERF 106 259 IPR003690 GO:0003690|GO:0006355
Mal4g4319 426 PANTHER CGI-12 PROTEIN-RELATED 63 401 IPR003690 GO:0003690|GO:0006355
Mal4g4319 426 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 63 401 - -
Mal4g4319 426 Gene3D Transcription termination factor 3, mitochondrial 194 392 IPR038538 -
Mal4g4319 426 MobiDBLite consensus disorder prediction 26 53 - -
Mal4g4319 426 MobiDBLite consensus disorder prediction 34 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4319 Mal-Chr4 120639541 120640821 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mal4g4319 mTERF 1.2e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4319 K15032 - gmx:102663105 397.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g4319 4 120639541 120640821 Mal4g4319 4 120639541 120640821 ECH