Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4317 ATGATAGTCACGGCAGCTACAACAACAATGATTCAAAACCCTAACAACACCCTCTTCCTTTCTTCTTCATCTTCTTCTTCCCAGAATCACCATTTCACAGTCAATTACCTCATTCACAATTGTGGGTTTTCACTAGAAACTGCTTCCAAACTCTCCAAACGAGTTCATCTCAACAACTCACAAAAACCCAATTCAGTTCTCGCATTATTCAAATCCTATGGCTTCTCAAATTCCCAATTATCAACTCTCATCAAAAAATGCCCTAATATTCTCTCTTACGATCCCAACAAAACCATTCTCCCCAAACTCAATTTCCTTCAATCAAAGGGTGCTTCAAATTCAGACCTTGTTCACATCATCACCAAAAACCCTAGGTTCTTATATCAAAGCTTAGAAAATTCAATGACCCCATGTTATGATTTTATCAAAAAATTCTTACTTTCTGATCAATCCATCATCGCTTCTCTTAAATGCTGTCCTAGCTTACTTTCTAAAACCCCATCTCACAATATTCAACTCCTGCTTCAAAATGGGGTCCCTCAATCAAGTATTGTTCTTTTGTTTCAAAGTTGGAATTACGTACTCACTGAGCATCCTCCTATTTTTAACAAGGCACTAGAGGAAATAAAGGAATTGGGATTCAAACCTGAATCTACAACTTTCGTTGTGGCATTGCGTGCTAAGGTTAATGGCAAATCCCATTGGGAAAAGAAGATTGATGTGTATAAGAAATGGGGTTGGTCTCAAGAAAATATTGTCTCAGCATTTCGGAATTTGGAGAAAAGGGTTATTCCTAGGGCTTTTGTCTTGCAATTTCTTGAATCCAAAGGTTTGATTAAGGATGCTAAATTGGTTACACCTTTCAAAGTCCCTGAGGATGCGTTTTTGAAGAGATTTGTGACTTGCTTTGAGGAGGAAGCTTCTCAGTTGTTGATGTTGTATGAAGAGAAAAAAGATGTTTCAAATCATGATTTGAAAAAAAGGTTTGCGACCGCGGCCTGGGAAGCGAAATAA 1014 0.3777 MIVTAATTTMIQNPNNTLFLSSSSSSSQNHHFTVNYLIHNCGFSLETASKLSKRVHLNNSQKPNSVLALFKSYGFSNSQLSTLIKKCPNILSYDPNKTILPKLNFLQSKGASNSDLVHIITKNPRFLYQSLENSMTPCYDFIKKFLLSDQSIIASLKCCPSLLSKTPSHNIQLLLQNGVPQSSIVLLFQSWNYVLTEHPPIFNKALEEIKELGFKPESTTFVVALRAKVNGKSHWEKKIDVYKKWGWSQENIVSAFRNLEKRVIPRAFVLQFLESKGLIKDAKLVTPFKVPEDAFLKRFVTCFEEEASQLLMLYEEKKDVSNHDLKKRFATAAWEAK* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4317 337 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 6 258 - -
Mal4g4317 337 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 259 319 - -
Mal4g4317 337 Gene3D Transcription termination factor 3, mitochondrial 28 172 IPR038538 -
Mal4g4317 337 Pfam mTERF 67 255 IPR003690 GO:0003690|GO:0006355
Mal4g4317 337 SMART mt_12 117 148 IPR003690 GO:0003690|GO:0006355
Mal4g4317 337 SMART mt_12 81 112 IPR003690 GO:0003690|GO:0006355
Mal4g4317 337 PANTHER CGI-12 PROTEIN-RELATED 6 258 IPR003690 GO:0003690|GO:0006355
Mal4g4317 337 PANTHER CGI-12 PROTEIN-RELATED 259 319 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4317 Mal-Chr4 120612830 120614058 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mal4g4317 mTERF 2e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4317 K15032 - gmx:102663105 320.087