Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4316 ATGTTTTGTTACTATCGCAGAGCATTGCTCAGATTCAAAACCCTAACAACACCCTCTTCCTCTTTTCATCTTCTACAACCATTTTCTTCTTCTCAAAATCACGCTTTCACAGTGAACTACCTCATTCAAAATCTTGATTTCTCTCCACAAACTGCTTCCAAACTCTCCAACAAACTTCATTTCAATGACTCACAAAAACCCAATTCAGTCCTCGCATTATTCAAATACTATGGCTTCTCAAAATCCCAATCATCAACTATTATCAAAACCTCCCCTGTTCTTCTTTCTTTCAATCCCAACAAAACCCTTATTCCCAAATTCAATTTCCTTCTCTCAAAGGGTGCTTCTACTTCAGACCTTGTCCACATCATCACCAAAAACCCTCTTATCTTGTCTCAAAGCTTGGAAAAAACCATCACCCCATCTTATGATTTCGTCAAAAGACTCTTACTTTCTGATCAATCTACCATTGCCGCTCTCAAAAACTGCGCTTGCTTGCTTTATTCTAAAATCCCATCTCAAAATATTCAATTCCTGCATCAAAATGGGGTTCCTCAATCTAAAGTTGTTATTTTGTTTCGAAATTGGTATAGCATAGTCGCTAAGAAACCTTCAATATTTGAGAAGGCAGTGGTGGAAGTAAAAGAGTTAGGATTCAAGCCTAACACTACGTTTTTCCTTGTCGCACTGCGTGCTAAGATTAGTGAAATATCCATTTGGGAAAAGAAGATTGATATGTATAAGAAATGGGGTTGGTCTGAAGAAAGTATTGTCTTAGCATTTCGGAAGTATCCATGGTGTATGCTGATATCTGTGGATAAAATTGATGCAGCAATGATTTTTTTTGTCAATCAAATGGGTTGGGAGCCTAATGTGCTTGCAAAACACCCAATACTTCTTATGATGAGTTTGGAGAAAAGGGTTATTCCTAGGGCTTATGTCTTGAAATTTCTTGAATCCAAAGGTTTGATTAAGGATGCTAAATTGGCTACACCTTTCAAAGTACCTGAGGATGCGTTTTTGAAGAGATTTGTGAATTGCTTTAAGGAAGAAGCTTCTCAGCTGTTGAAGTTGTATGAAGAGAAAAAAGATGTTTGCGACCGTGATTTGGGAAGCGGCATCAAGGGTCTTTGCAGCCATGACACACTCTGA 1152 0.3802 MFCYYRRALLRFKTLTTPSSSFHLLQPFSSSQNHAFTVNYLIQNLDFSPQTASKLSNKLHFNDSQKPNSVLALFKYYGFSKSQSSTIIKTSPVLLSFNPNKTLIPKFNFLLSKGASTSDLVHIITKNPLILSQSLEKTITPSYDFVKRLLLSDQSTIAALKNCACLLYSKIPSQNIQFLHQNGVPQSKVVILFRNWYSIVAKKPSIFEKAVVEVKELGFKPNTTFFLVALRAKISEISIWEKKIDMYKKWGWSEESIVLAFRKYPWCMLISVDKIDAAMIFFVNQMGWEPNVLAKHPILLMMSLEKRVIPRAYVLKFLESKGLIKDAKLATPFKVPEDAFLKRFVNCFKEEASQLLKLYEEKKDVCDRDLGSGIKGLCSHDTL* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4316 383 Pfam mTERF 71 222 IPR003690 GO:0003690|GO:0006355
Mal4g4316 383 Pfam mTERF 241 340 IPR003690 GO:0003690|GO:0006355
Mal4g4316 383 PANTHER CGI-12 PROTEIN-RELATED 26 367 IPR003690 GO:0003690|GO:0006355
Mal4g4316 383 Gene3D Transcription termination factor 3, mitochondrial 173 358 IPR038538 -
Mal4g4316 383 Gene3D Transcription termination factor 3, mitochondrial 33 172 IPR038538 -
Mal4g4316 383 SMART mt_12 290 324 IPR003690 GO:0003690|GO:0006355
Mal4g4316 383 SMART mt_12 121 152 IPR003690 GO:0003690|GO:0006355
Mal4g4316 383 SMART mt_12 258 289 IPR003690 GO:0003690|GO:0006355
Mal4g4316 383 SMART mt_12 85 116 IPR003690 GO:0003690|GO:0006355
Mal4g4316 383 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 26 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4316 Mal-Chr4 120606836 120607987 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mal4g4316 mTERF 9.2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4316 K15032 - gmx:102663105 378.637