Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4314 ATGGCATCTTCAAATTGGAAGCCTAAGTTTGGAATGGGATTTGATAATATGGAGGAGGCCTATCAATTTTGGCATGCTTATAGTGTACGTGTGGGCTTCGGAGTTAGAATACGTTTTACAAACAAGAAGAAGGAAGACGGTAGTATATCCTCATGTAGGTTGGTATGTTGTAAGGATGGGAAGAAAGGGAAAAGCAATGCGTATGAAAGAAAATTTCAAAGAGCCGAGACTAGAACAGATTGCCCTGCAAGAATTTCACTTTCACAATACCATAACCATGATCTACAAAAACCAGAAACCACACACATGCTTCGATCACATAGAAAGATAACTGAAGTACAAGCATATGAGATTGATATGGCTGATGACTCTGGATTAAGGCAGAAGGCAACATATCAACTTATGAGCACACAGGCAGGCCATAGAGCTAATGTTGGATTTACACAGGTGGATGTAAGAAACTACATTACTGCAAAAAGACAAAGAATTATGAAGTACGGTGAGGCTGGATGTCTTTCACAATATTTTCAACGACAGTTGTTGGAGAATCCGTCCTTCTTTCATGCATTTCAGATGGATATAGAAGAACAAATTACAAATGTGTTTTGGTGTGATGCACATATGATATTGGATTATGGGTATTTTGGTGATGTTGTTTCATTGGACACCACATATTGTACCAACCATGCCAATAGACCACTTGCTTTGTTTTCTGGTTTCAACCATTATAGAGGTTCAATCATTTTTGGTGCAGCACTAATGTATGATGAGACAATTCCCTCATTTAAATGTGATGTATTATCAAAAGTAACACACAACAACAAAAAACCAAAGACGATCTTCACTGACCAAGATCAAGCAATGTCTAGTGCACTTGCACAAGTGATGCCTGAGACTCGCCATGGTTTATGCACATGGCACTTGCTAGATTTCAAAAAATGTATGTATGATATTGACACTGAAGCAGATTTTGAGAAACTTTGGTTTGATATGATCAATGAATATGATGTTCATGATAAAACTTGGATCATATCAGAAGTGTTAACACTTGGCATGCGAAGTACACAAGTTAGTGAAAGTTTGAATGCTCACTTCAAATCTGGTATGAAACCGAATGTGGATATCCTACAATTCTTCAAACATTTCGAAACAGTTGTTGAGGAGAAGAGAGCAAAAGAATTGAGTTCTGAGTATACATCTTCACATAAGCTTCCAAGGTTAGCATATGAAACTTCACCAATACTAATCCAAATGGGAAAAATATACACACACAAGGTATTTGAGTTGTTCCAGGACGAGTTTAAGTTATTCTTAGCTTTATCTATATTGGAGAGACATGAATCTGACTCTCTTTGTGAATATGTCATCACTATGATGAACCATGAAAGATCTTGGAGAGTGTCATTTAATCATGCTTCAACTTCCATTACTTGTAGTTGTAGGAAGTTTGAAACATTTGGCATACTTTGTTCACATGCATTAAAAGTGTTTGAATTTAATGATGTTAAGGTGATTCCGGAAAAGTATATTTTAAGAAGGTGGACAAGAGATGCTCGTTGTGGCATTGTGCAAGATTTTAGGGGGAAGGAGGTTGTAGGAGATCCTAAGTTGTCTAGAAATCGAATGTTTAGACAAGTTATCTCTAAGTTCATTAGAGCGGCAACTGAAGCATCGCCTAGTGAAGAATGTCTCAAGCTTGTTGAAAATAGTGTAGATTACATGTTCAAGAAAATAATGGAACTTCATGCACAAGCTGTAGATAATGACGGTGATAATAGTGATCGTCCGACCTTATTGAGTTCTGATGCTATGCAAGCAAAGGGGTTCAAGAAACGAGCCGGTTCAAAGCGAGCTAAGCGATATAAAAGTTGCATTGAACTCCAGAAGAAGCGCGCTCCATCCAAACGTTCACAGGCTAAAGAATTAACAACCCATATGGTCGATGGAGTATCTTGTTCTGCGCCTCCAACTTATGAGCTCCCACAAGCACGTGAAGATCAAGTCAGTTACACAGCCATGATGATGGACATCGAAAGAAATGGAGCTGATTTTGTTTTACATGTTTTGGATATGAGTTTTTGTAATGCTTTAGTTACTGCTATGGTCCAGCAGATTAAGGTCTAA 2124 0.3785 MASSNWKPKFGMGFDNMEEAYQFWHAYSVRVGFGVRIRFTNKKKEDGSISSCRLVCCKDGKKGKSNAYERKFQRAETRTDCPARISLSQYHNHDLQKPETTHMLRSHRKITEVQAYEIDMADDSGLRQKATYQLMSTQAGHRANVGFTQVDVRNYITAKRQRIMKYGEAGCLSQYFQRQLLENPSFFHAFQMDIEEQITNVFWCDAHMILDYGYFGDVVSLDTTYCTNHANRPLALFSGFNHYRGSIIFGAALMYDETIPSFKCDVLSKVTHNNKKPKTIFTDQDQAMSSALAQVMPETRHGLCTWHLLDFKKCMYDIDTEADFEKLWFDMINEYDVHDKTWIISEVLTLGMRSTQVSESLNAHFKSGMKPNVDILQFFKHFETVVEEKRAKELSSEYTSSHKLPRLAYETSPILIQMGKIYTHKVFELFQDEFKLFLALSILERHESDSLCEYVITMMNHERSWRVSFNHASTSITCSCRKFETFGILCSHALKVFEFNDVKVIPEKYILRRWTRDARCGIVQDFRGKEVVGDPKLSRNRMFRQVISKFIRAATEASPSEECLKLVENSVDYMFKKIMELHAQAVDNDGDNSDRPTLLSSDAMQAKGFKKRAGSKRAKRYKSCIELQKKRAPSKRSQAKELTTHMVDGVSCSAPPTYELPQAREDQVSYTAMMMDIERNGADFVLHVLDMSFCNALVTAMVQQIKV* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4314 707 PANTHER OS03G0181600 PROTEIN 3 587 - -
Mal4g4314 707 SMART 26again6 476 503 IPR006564 GO:0008270
Mal4g4314 707 Pfam SWIM zinc finger 476 497 IPR007527 GO:0008270
Mal4g4314 707 Pfam FAR1 DNA-binding domain 22 92 IPR004330 -
Mal4g4314 707 ProSiteProfiles Zinc finger SWIM-type profile. 465 501 IPR007527 GO:0008270
Mal4g4314 707 Pfam MULE transposase domain 218 308 IPR018289 -
Mal4g4314 707 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 3 587 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4314 Mal-Chr4 120595107 120598797 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal4g4314 MULE 4.6e-21 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4314 - - cam:101507984 902.508