Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4296 ATGGGTTGTGTGTTTGGTAAAGAGTCATTGAGGGAGGAGAGGAGAGAGGAAGTGAGAGAAGAGAAAATAGATGTGGGTGGTGGTGGTAGAGAGGTTGAGAATGTGAAAGAGGGTGGAGAGGAGAAGAGAGTAAGGCCTAGTGGGGAGAGAAGAAGAAGATCTTCGAAGGCGAATCCGAGGTTGAGTAATCCACCTAATAATGTTCATGGTGAACAGGTTGCAGCTGGTTGGCCTTCTTGGCTTTCTAAGGTTGCTGGTGAAGCTATTAATGGATTGGTTCCTAGGAGAGCTGATACTTTTGAGAAACTAGATAAGATTGGGCAAGGTACATACAGCAATGTTTACAAAGCTAGGGATACTTTAACAGGGAAGATTGTAGCCTTAAAGAAGGTTCGTTTCGACAATTTAGAGCCTGAGAGTGTGAAGTTCATGGCCAGAGAGATTCTGATTCTGCGTCGTTTGGATCATCCCAATGTTGTCAAACTGGAAGGCTTAGTGACATCTAGAATGTCATGCAGTTTATATCTTGTGTTTGAATACATGGCTCATGATCTGGCTGGACTTGCTACAAATCCCGCAATTAAGTTCACAGAGCCTCAGGTAAAATGTTACATGCATCAACTATTTTCTGGGCTGGAACATTGTCACAACCGTCATGTGCTGCATCGTGATATAAAGGGTTCAAACCTTCTTATTGACAATGATGGGATTCTCAAGATTGCTGATTTTGGATTAGCTTCCTTCTTTGATCCTGATCACAAGCACCCTATGACCAGTAGAGTGGTGACTTTATGGTATCGACCTCCAGAACTTCTTCTTGGAGCCACTGAATATGGTGTAGGCGTGGACCTCTGGAGTGCTGGCTGCATTCTTGCAGAATTGTTGGCTGGAAAACCCATCATGCCTGGTCGAACAGAGGTGGAGCAGCTACATAAGATATTTAAGCTATGTGGTTCTCCTTCGGAAGACTATTGGAAAAAATCAAAGTTGCCGCATGCTACCATTTTTAAGCCCCAACAATCATACAAGCGATGCATAGCGGAAACTTTTAAGAATTTTCCGCCATCATCCCTGCCACTGATTGAGACCCTTCTCACAATCGATCCAGATGAACGTCTGACTGCCACAGCTGCATTGCATAGTGAATTCTTTACTACTAAACCATATGCTTGTGATCCCTCTAGCCTTCCTAAATATCCTCCCAGCAAGGAGATGGATGCAAAGCTACGGGATGAAGAAGCTAGAAGATTGAGAGCAGCTGGTAGATCAAATGCTGATGGTGTCAAGAAATCGCGTCCACGAGAGCGAGTAAGGAGGGGACTTCCCGTTCCTGATGCCAATGCTGAACTGCAAGCAAATATTGATAGACGGCGATTGATTACACACGCAAATGCTAAGAGCAAGAGTGAGAAATTCCCTCCTCCCCACCAAGACGGAGATCTAGGCTATCCTTTGGGTTCTTCACAACACATGGATCCAGTTTTCGATCCTTCCGATGTTCCATTCAGTTCCACAAATTTGTCACTACCCAAAGCAGATATCCATACTTGGTCTGGTCCATTGGTAGATCCCGGCAACATTGGTGCACCGAGGAGAAAGAAAAAACACGGCAGGTGA 1617 0.4484 MGCVFGKESLREERREEVREEKIDVGGGGREVENVKEGGEEKRVRPSGERRRRSSKANPRLSNPPNNVHGEQVAAGWPSWLSKVAGEAINGLVPRRADTFEKLDKIGQGTYSNVYKARDTLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFEYMAHDLAGLATNPAIKFTEPQVKCYMHQLFSGLEHCHNRHVLHRDIKGSNLLIDNDGILKIADFGLASFFDPDHKHPMTSRVVTLWYRPPELLLGATEYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWKKSKLPHATIFKPQQSYKRCIAETFKNFPPSSLPLIETLLTIDPDERLTATAALHSEFFTTKPYACDPSSLPKYPPSKEMDAKLRDEEARRLRAAGRSNADGVKKSRPRERVRRGLPVPDANAELQANIDRRRLITHANAKSKSEKFPPPHQDGDLGYPLGSSQHMDPVFDPSDVPFSSTNLSLPKADIHTWSGPLVDPGNIGAPRRKKKHGR* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4296 538 Gene3D Transferase(Phosphotransferase) domain 1 183 423 - -
Mal4g4296 538 SUPERFAMILY Protein kinase-like (PK-like) 95 390 IPR011009 -
Mal4g4296 538 MobiDBLite consensus disorder prediction 7 56 - -
Mal4g4296 538 MobiDBLite consensus disorder prediction 417 441 - -
Mal4g4296 538 ProSitePatterns Serine/Threonine protein kinases active-site signature. 220 232 IPR008271 GO:0004672|GO:0006468
Mal4g4296 538 Pfam Protein kinase domain 100 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g4296 538 ProSitePatterns Protein kinases ATP-binding region signature. 106 129 IPR017441 GO:0005524
Mal4g4296 538 Gene3D Phosphorylase Kinase; domain 1 88 182 - -
Mal4g4296 538 PANTHER CYCLIN-DEPENDENT KINASE 4 537 - -
Mal4g4296 538 SMART serkin_6 100 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g4296 538 PANTHER CELL DIVISION PROTEIN KINASE 4 537 - -
Mal4g4296 538 MobiDBLite consensus disorder prediction 464 538 - -
Mal4g4296 538 MobiDBLite consensus disorder prediction 1 69 - -
Mal4g4296 538 CDD STKc_CDK9_like 100 384 - -
Mal4g4296 538 ProSiteProfiles Protein kinase domain profile. 100 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4296 Mal-Chr4 120328366 120332242 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4296 95 422 Core Cell Cycle Gene Families AT5G10270 52.035 2.50e-118 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mal4g4296 Pkinase 3.6e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4296 K08819 - gmx:100779413 955.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g4296 4 120328366 120332242 Mal4g4296 4 120328366 120332242 ECH
Mal5g4767 5 120823106 120826180 Mal4g4296 4 120328366 120332242 PCT