Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4293 ATGGGTGCTTACAAGTACATTTCTGAGCTATGGCGGAAGAAGCAATCAGATGTGATGAGATTCATGCAGCGTGTGAGGTGTTGGGAGTATCGTCAACAATCCTCCATCGTTCGTCTCACCAGACCTACTCGTCCTGACAAGGCTCGCCGTTTGGGTTACAAGGCTAAGCAGGGCTATGTTGTTTACCGCGTTCGGGTTCGACGTGGTGGCAGGAAGAGGCCTGTTTCCAAGGGTATTGTGTACGGTAAACCCACAAACCAGGGAGTTACCCAACTCAAGTTTCAAAGGAGCAAGAGGTCAGTTGCTGAGGAGCGTGCTGGGAGGAAGCTTGGTGGCCTCAGGGTTCTCAATTCATACTGGGTCAATGAGGATTCTACCTTCAAATATTTTGAGGTTGTTTTGGTTGATGTTGCTCACAGTGCTATAAGAAATGACCCAAGAATCAACTGGCTCACCAATCCTGTGCACAAGCATAGGGAACTTCGTGGCCTCACTTCTGCTGGTAAAGAAAACAGAGGTTTGAGTGGCAAGGGGCATCGTTACCACAAAGCCCGTCCATCCCGCAGGGCAAACTGGAAGAGAAACAACACCATTTCTGTTCGCCGCTACCGTTAA 615 0.4943 MGAYKYISELWRKKQSDVMRFMQRVRCWEYRQQSSIVRLTRPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVSKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWVNEDSTFKYFEVVLVDVAHSAIRNDPRINWLTNPVHKHRELRGLTSAGKENRGLSGKGHRYHKARPSRRANWKRNNTISVRRYR* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4293 204 Pfam Ribosomal L15 2 191 IPR000439 GO:0003735|GO:0005840|GO:0006412
Mal4g4293 204 Gene3D Ribosomal protein l15e 1 204 IPR024794 GO:0003735|GO:0005840
Mal4g4293 204 PANTHER RIBOSOMAL PROTEIN L15 1 204 IPR000439 GO:0003735|GO:0005840|GO:0006412
Mal4g4293 204 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 1 195 IPR012678 GO:0003735|GO:0005840|GO:0006412
Mal4g4293 204 PANTHER RIBOSOMAL PROTEIN L15 1 204 - -
Mal4g4293 204 SMART Ribosomal_L15e_2 2 193 IPR000439 GO:0003735|GO:0005840|GO:0006412
Mal4g4293 204 MobiDBLite consensus disorder prediction 176 190 - -
Mal4g4293 204 ProSitePatterns Ribosomal protein L15e signature. 46 69 IPR020925 GO:0003735|GO:0005840|GO:0006412
Mal4g4293 204 MobiDBLite consensus disorder prediction 164 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4293 Mal-Chr4 120280300 120282843 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4293 1 204 Cytoplasmic Ribosomal Protein Gene Family AT4G17390 86.765 1.05e-121 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4293 K02877 - gmx:100305473 372.859