Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4290 ATGAATCAGTACCACATCTACGAAGCAATTGGTCGCGGAAGATACTCGACTGTTTACAAAGGTAGAAAGAAGAAGACGATTGAGTATTTCGCCATAAAAAGCGTTGATAAATCTCAGAAGAACAAGGTTCTTCAAGAAGTTAGGATTCTTCACACTTTGGATCACCAAAATGTGCTCAAGTTTTATTCATGGTATGAAACTTCTGCTCACTTATGGTTGGTTTTGGAGTATTGTGTTGGAGGGGATCTACTTTCCATACTACGGCAGGATAGTCAACTTCCTGAAGATTCTGTTAATGATCTTGCTTGTGACCTCGTCAGAGCTTTGCAGTATTTACATTCAAATGGGATAATTTACTGTGATCTGAAACCATCAAATATCCTACTAGATGAAAATGGGCGTACAAAGCTTTGTGATTTCGGATTGGCCAGAAAGTTAAAAGAGATATCAAAAGTTCCTTCTTCCTCGTTGCCTCAAGCAAAACGTGGAACGCCCTCTTACATGGCTCCGGAGCTTTTTGAAGATGGTGGAGTCCATTCTTATGCTTCTGATTTCTGGGCTCTAGGTTGTGTACTATATGAATGTTATGCTGGGAGGCCTCCTTTTGTGGGAAGAGAATTCACTCAACTTGTAAAATCCATCATTTCAGATCCGACTCCACCTCTCCCTGGCAATCCAAGTCGACCTTTTGTCAATTTAATAAATTCTCTGTTGGTCAAAGATCCAGCTGAAAGAATACAGTGGCCTGAGCTTTGTGGACATGCCTTTTGGCAAACCAAATTCACTTTAGTGTCTCTTCCTCCTCAACCTGCGTTTGATGATATGATTGAGCTACATGCTAAACCGTGCTTATCAGAACGTAATGGAGATAAGTCTTCTCATAACAGGACCCCTCCCAAATATCGTGAAAAAGACGTGAAAGGGGTGCTAAAGAAGGATGAGAATTCTGGTTTAGGATCAAGAGCCATTGAGACGCCAACAAAAGCAACACCAAATGCTCAAAGAACTCAGACAAAGGGTTCTGGCAGAACAGTTGAAGCAAAGCAGAAAGATACTTCCATTATTAAAAAAGGTTTGAATCTTTTGAGAATGTCAAGAATAGCAAAATCAAATTTACAGAAAGAAAATGAGAAAGAAAACTATCGACGCCCCTTGCCCAATGGCTCTGAGAAGGATGCCGATGTTAAAATTGAGAACACTGACATGGAACTTGATTTTAATGAGAATAGTGACGAGGATGCACTTGAAGAAACTGATGGTTCTGAAAATACACCTTCTGCACCCAATGAGAAAATGGAGAATAATTTGCAGAATCAGGGAAAAGCAGAGGACACTGAAAATGATATACACCGGTTGGACACACCATCTGTGACTACTCCTGCCTCAGATGATTCAAGGTCATTTGATCACGAGTCAACTCCAGACCGTTCTGACATATCTGCTATTTCTCCAAGTGTGAGCCCTCTAGTGAGAAAACAGAGGCTTAAAGAAGACTTAGGATCTGGCCTTGACTCTGATTCTTCAAGATCGTCTAACGACATCTCCCAGGTTATTTGGCATCCATCTGACCTCTCAGTCAGACCTGTAATGCCCAGCAGAAAAGTTGACAAAGGCTCGGAAGTCATTCCTTCACTTCCTTTTGAGGCGTTGCAAGCAACTGATTTTATCAAGATGCCTAAAGAGCAATTGGAGTCAGTCCATAACCGAATTATAGCCATCTTGAATGGCAGTACTAGCATTGGTGAGAAACAGAATGTGGTTAGGTACCTCGAGATGTTGAGCGGTAATGCTGATGCAGCCAATATCTTGACCAATGGGCCAATAATGCTCATTCTCGTAAAGTTGCTACGTCAATCCAAGGCATCAGCTTTACGTGTTCAACTTGCCTCACTGATCGGTCTGTTGATTAGACACTCTACCTTTGTTGATGACAGTTTGGCTAATTCTGGAATTCTAGGTTCACTGACGGATGGCCTCAGGGACAGGCATGAAAAAGTGAGGAGATTTTCCATGGCTGCGTTGGGCGAGTTGCTATTTTATATATCCACCCAAAGTGCAGATTCTAGGGATAACACTCCCCTTGAATCTCCATCAAAGGACAATAGGACTGCGCATGGCTGGCAGGTTCCAAATTCATTAATTTCCTTGGTGTCATCGATATTGAGGAAAGGTGAAGATGATATAACTCAATTGTATGCATTGAGAACAATTGAGAATATTTGCAGTCAAGGAGGGGTCTGGGTGGGACGTTTGACCAGTCAAGATGTTATTAGTAATCTCTGCTATATCTATAGAGCGGCAGGGAAACAGGAAAGTATGAGGCTTACTGCAGGGTCGTGTTTGGTGCGCTTAGCTCGTTTTAATCCTCCTAGCATTCAGTCTGTTGTAGAGAAACTCTCATTCAAGGACCTAGCTTCTGCTCTTGTCAAAGGTAATCCACGAGAGCAGCAAATCAGCTTAAATCTTCTTAACACGGCAATGCTTGGAAGTCATATGATCACAAATGTTGGAAGATACCTTATGCAACTTGCAGAGGATAAGAATCTGATCCCAAGTCTTTTGGCTCTTGTTGAGCAGGGCAGTGAAGTTTTAAAAGGAAAGGCACTTGTCTTTGTGGCTCTCCTCTGCAAGCACGGTAGGAGGTGGCTTCCGCAGTTCTTTTGTAGCCATAAGTTACTTTCAGTGGTGGACAGGCTGGGAAAAGAGAAGGATGCCTTTGTGCGACAGTGTTTAGATGCATTTCTGCATATTGTGGCATCTACTATTCCAGGTTTACTGGATATTATAACCGGAGATATCCAGCAAATGATGGGAGGAAGGCGCCATGGACATATCTCTTCCCTTACCAGCAGATCTGCTCCAAAATCCAACATTCATTTGTTTCCTGTTGTCCTTCATCTTCTTGAAAGTTCAGCTTTCAAGCATAAAGTGGCTACACTTCCAGTACTACGGCAGTTGGCGAATCTGATTAAACTCGTGGAGGCACCGTTTCAGGGAAGAGATGACTTCCAAATAACCCTTCTTCGAATTTCAGAGTCTCTCACGGAGGAATCTTCCGTGATCCTTGCCAATCCTGATATTTTCTTACGTGAAATCCTCCCTAGTTTGACAGTTCTCTACAAGGGTAATAAGGACGGTGATGCCAGATTTTTGTGCCTTAAAATCTTTTTCGATGTGATGATTATTCTCTTGAGTGAACCAATTGAGGAAGAGCAAAGATTGAACGATCTGAAATTCGTATCAAATACACATTTTCTTCCTCTCTACCCAACCTTGATCGAAGATGAAGATCCTATTCCTATATTTGCACAGAAGCTTCTTGTCATGCTGCTAGAGTTCAATTTTATTTCAATTCCAGACATTATACACCTGAAGACAATTTCACAATGTTTTGAGTTCTTGCTTGGTGATCTGTCAAATGCAAATGTGAATAATGTTAAGCTGTGTCTTGCTTTGGCTTCTGCTCCTGAAATGGAGTCCAAATTACTCTCCCAATTGAAAGTTGTTAGGAGGATTGGCAACTTTCTTGAGTTTGTATGTGCAAAGGGTATGGAAGATTTGCTGGAGCCAACTATTGGGCTGTGTAGGGCATTTCTAGCACGTTCAGTCAGCTGTACAAAAGGCTTCAGCTACACAACAGAACCAACTCTCTTAGGTGACTGTCCTCCCGAGGTGAGTGGCGCTGTTGATCCGCAGCAATGCATAAGAGATATAACAGACTTTGGAAGCAATGTTGGTGTCTTCCTAGAGTTGAGTGCATCTAGAGAGACCGGTGTTGCTGATATAGCTTCTCAGTGTGTGGTTTTACTGCTTAAGGCTGCTCCTAGAGAAGCTACCACTGGTCTACTAACCAATCTCCCCAAGGTCACTGTGATCCTAGAATCCTGGAGTAAAGGCACCACTCACTTAACGGTGCAGAGAATGCTTCATTCTTTAGGTTATGCTTGCAAGCAGTACTTATTGCATGCAATGATATTATCAATATCTATACCAGAGATTTCAAGAATTGAAGCGATAGTTTCTGAACTCAAGAGTTCAAGTGAGCCTGCTTTAGCCAAAACTGCTGCATTGGCAGCCTTGGAGTTGCTGCGGTTACCTCGCTGCATTTGA 4110 0.4234 MNQYHIYEAIGRGRYSTVYKGRKKKTIEYFAIKSVDKSQKNKVLQEVRILHTLDHQNVLKFYSWYETSAHLWLVLEYCVGGDLLSILRQDSQLPEDSVNDLACDLVRALQYLHSNGIIYCDLKPSNILLDENGRTKLCDFGLARKLKEISKVPSSSLPQAKRGTPSYMAPELFEDGGVHSYASDFWALGCVLYECYAGRPPFVGREFTQLVKSIISDPTPPLPGNPSRPFVNLINSLLVKDPAERIQWPELCGHAFWQTKFTLVSLPPQPAFDDMIELHAKPCLSERNGDKSSHNRTPPKYREKDVKGVLKKDENSGLGSRAIETPTKATPNAQRTQTKGSGRTVEAKQKDTSIIKKGLNLLRMSRIAKSNLQKENEKENYRRPLPNGSEKDADVKIENTDMELDFNENSDEDALEETDGSENTPSAPNEKMENNLQNQGKAEDTENDIHRLDTPSVTTPASDDSRSFDHESTPDRSDISAISPSVSPLVRKQRLKEDLGSGLDSDSSRSSNDISQVIWHPSDLSVRPVMPSRKVDKGSEVIPSLPFEALQATDFIKMPKEQLESVHNRIIAILNGSTSIGEKQNVVRYLEMLSGNADAANILTNGPIMLILVKLLRQSKASALRVQLASLIGLLIRHSTFVDDSLANSGILGSLTDGLRDRHEKVRRFSMAALGELLFYISTQSADSRDNTPLESPSKDNRTAHGWQVPNSLISLVSSILRKGEDDITQLYALRTIENICSQGGVWVGRLTSQDVISNLCYIYRAAGKQESMRLTAGSCLVRLARFNPPSIQSVVEKLSFKDLASALVKGNPREQQISLNLLNTAMLGSHMITNVGRYLMQLAEDKNLIPSLLALVEQGSEVLKGKALVFVALLCKHGRRWLPQFFCSHKLLSVVDRLGKEKDAFVRQCLDAFLHIVASTIPGLLDIITGDIQQMMGGRRHGHISSLTSRSAPKSNIHLFPVVLHLLESSAFKHKVATLPVLRQLANLIKLVEAPFQGRDDFQITLLRISESLTEESSVILANPDIFLREILPSLTVLYKGNKDGDARFLCLKIFFDVMIILLSEPIEEEQRLNDLKFVSNTHFLPLYPTLIEDEDPIPIFAQKLLVMLLEFNFISIPDIIHLKTISQCFEFLLGDLSNANVNNVKLCLALASAPEMESKLLSQLKVVRRIGNFLEFVCAKGMEDLLEPTIGLCRAFLARSVSCTKGFSYTTEPTLLGDCPPEVSGAVDPQQCIRDITDFGSNVGVFLELSASRETGVADIASQCVVLLLKAAPREATTGLLTNLPKVTVILESWSKGTTHLTVQRMLHSLGYACKQYLLHAMILSISIPEISRIEAIVSELKSSSEPALAKTAALAALELLRLPRCI* 1370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4290 1369 PANTHER SERINE/THREONINE-KINASE ULK4-LIKE PROTEIN-RELATED 1 1366 IPR044591 GO:0000911|GO:0000914|GO:0008017
Mal4g4290 1369 ProSitePatterns Serine/Threonine protein kinases active-site signature. 117 129 IPR008271 GO:0004672|GO:0006468
Mal4g4290 1369 CDD STKc_ULK4 3 257 - -
Mal4g4290 1369 MobiDBLite consensus disorder prediction 370 403 - -
Mal4g4290 1369 SMART serkin_6 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g4290 1369 MobiDBLite consensus disorder prediction 420 442 - -
Mal4g4290 1369 MobiDBLite consensus disorder prediction 497 516 - -
Mal4g4290 1369 MobiDBLite consensus disorder prediction 370 491 - -
Mal4g4290 1369 MobiDBLite consensus disorder prediction 404 419 - -
Mal4g4290 1369 MobiDBLite consensus disorder prediction 320 343 - -
Mal4g4290 1369 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Mal4g4290 1369 SUPERFAMILY ARM repeat 563 919 IPR016024 -
Mal4g4290 1369 Gene3D Transferase(Phosphotransferase) domain 1 1 307 - -
Mal4g4290 1369 Gene3D - 555 918 IPR011989 -
Mal4g4290 1369 Pfam Protein kinase domain 4 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g4290 1369 MobiDBLite consensus disorder prediction 283 351 - -
Mal4g4290 1369 ProSiteProfiles Protein kinase domain profile. 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g4290 1369 MobiDBLite consensus disorder prediction 283 318 - -
Mal4g4290 1369 SUPERFAMILY Protein kinase-like (PK-like) 1 258 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4290 Mal-Chr4 120243573 120249748 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4290 1 258 AGC Kinase Gene Family AT1G45160 34.364 1.07e-37 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK ULK_ULK4 Mal4g4290 Pkinase 1.8e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4290 K17545 - gmx:100777288 2349.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g4290 4 120243573 120249748 Mal4g4290 4 120243573 120249748 ECH